BAC Information

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BAC

Clone NameB6Ng01-054N04
Chromosome17 (Build37)
Map Location 61,697,536 - 61,862,772
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC433129, EG620725
Downstream geneLOC100043560
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-054N04.bB6Ng01-054N04.g
ACCDH877462DH877463
length1,099721
definitionDH877462|Mus musculus domesticus DNA, BAC clone: B6Ng01-054N04, 5' end.DH877463|Mus musculus domesticus DNA, BAC clone: B6Ng01-054N04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,861,674 - 61,862,772)(61,697,536 - 61,698,129)
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgcacaaaggaaattat
tatcctacattttaaaaactgtaattattttcaaacttatagtgcagatg
aacctgtagacatttgtcctttatgctttaaacttaaagctcaaaataaa
cagctgtactctggctgtgttttcagagtgactttagcacttttgactgc
atccagaatgtaagttagaatcatcaatagttactaacactccattataa
taatgtaccctggcatcagcaactcctccagcaaggaatattttggtttc
tgccatgttttatcaatttcacagcagggtagctgtaatactaacaaaca
tgtcttcttgcatacaaatgtacagatttctttttgacctcaagtatgta
agtaatatttatcttttaaacaaatttatattcaccttcactaaataaat
tagcttgtatatttcctcaggactcctccataatacattgtggagtaata
aacattctaaatacaaagaagttcttgtacatgagaaaaatgttggttat
tttcttattattcttttttatttatttgcagtatatagatttaacattca
gaaatggcatcattatatttttcttctgaaccttgtccaaatgctattta
aatcaaaacttaaaatattatatataaactttaattttcatttgatatat
ttaaactcggagcttatttataattaattttgttttccttaaagtagcca
aacaaaatgtattagaccagtcaatcctcatttccaattgggtttatcaa
aatcacgtatatttcttatttcaacaaattatagatcgagtctacactca
gttagcactttgcttacttaaaagcaatacaacacaagcccataagtttt
attcaataatgtcttgacaatgagttaaaagtttgagaaggttatgcagc
catattgtccagtttccaatctattctctacttatctgtttctactgggg
gatcgtgggcatgtcattccaaacctatagtcctggtatgccatgaaat
gaattctcacctgaggaataccgaatggctaagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgttggcgaggatgtggagaaagaggaacactcctccattgatggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtagttcctca
aaaaactggacatagtactaccgaaggatcccgcaatacctctcctgggt
acatatccagatgctccaaccggtaagaaggacacatgttccactatctt
catagcagccttattttatgttccttctatggggcttcagtccccttcta
ctccctgggtatttctctggctccttcattggggaccttgtgctccatcc
aatggatgactgtgagcatccacttctgtatttgccaggcactggcagag
cctcacagaagacagctatatcaggttcctgtcagcaggcttttgttggc
atctgcctagtgtctgggtttggtggttgtttatgaggtggattcccaaa
tggggcagtcttagtcttctttccaggttttaagaggaaatccatctttc
tattgaaccccctttgtttgtatcttggctgcatgcatgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_61861674_61862772
seq2: B6Ng01-054N04.b_45_1143 (reverse)

seq1  ATTTCATGGCATACAGTGACTATAGGTTTTGAATGACATG-CCACGATTC  49
      ||||||||||||||   |||||||||||| |||||||||| ||||||| |
seq2  ATTTCATGGCATACCAGGACTATAGGTTTGGAATGACATGCCCACGATCC  50

seq1  ACCAGTAGAAACAGATAAGTAGAGAATAGATTGGAAACTGGACAATATGG  99
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGTAGAAACAGATAAGTAGAGAATAGATTGGAAACTGGACAATATGG  100

seq1  CTGCATAACCTTCTCAAACTTTTTAACTCATTGTCAAGACATTATTGAAT  149
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTGCATAACCTTCTCAAAC-TTTTAACTCATTGTCAAGACATTATTGAAT  149

seq1  AAAACTTATGGGCTTGTGTTGTATTGCTTTTAAGTAAGCAAAGTGCTAAC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTTATGGGCTTGTGTTGTATTGCTTTTAAGTAAGCAAAGTGCTAAC  199

seq1  TGAGTGTAGACTCGATCTATAATTTGTTGAAATAAGAAATATACGTGATT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGTAGACTCGATCTATAATTTGTTGAAATAAGAAATATACGTGATT  249

seq1  TTGATAAACCCAATTGGAAATGAGGATTGACTGGTCTAATACATTTTGTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATAAACCCAATTGGAAATGAGGATTGACTGGTCTAATACATTTTGTT  299

seq1  TGGCTACTTTAAGGAAAACAAAATTAATTATAAATAAGCTCCGAGTTTAA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTACTTTAAGGAAAACAAAATTAATTATAAATAAGCTCCGAGTTTAA  349

seq1  ATATATCAAATGAAAATTAAAGTTTATATATAATATTTTAAGTTTTGATT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCAAATGAAAATTAAAGTTTATATATAATATTTTAAGTTTTGATT  399

seq1  TAAATAGCATTTGGACAAGGTTCAGAAGAAAAATATAATGATGCCATTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGCATTTGGACAAGGTTCAGAAGAAAAATATAATGATGCCATTTC  449

seq1  TGAATGTTAAATCTATATACTGCAAATAAATAAAAAAGAATAATAAGAAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATGTTAAATCTATATACTGCAAATAAATAAAAAAGAATAATAAGAAA  499

seq1  ATAACCAACATTTTTCTCATGTACAAGAACTTCTTTGTATTTAGAATGTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACCAACATTTTTCTCATGTACAAGAACTTCTTTGTATTTAGAATGTT  549

seq1  TATTACTCCACAATGTATTATGGAGGAGTCCTGAGGAAATATACAAGCTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTCCACAATGTATTATGGAGGAGTCCTGAGGAAATATACAAGCTA  599

seq1  ATTTATTTAGTGAAGGTGAATATAAATTTGTTTAAAAGATAAATATTACT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTAGTGAAGGTGAATATAAATTTGTTTAAAAGATAAATATTACT  649

seq1  TACATACTTGAGGTCAAAAAGAAATCTGTACATTTGTATGCAAGAAGACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATACTTGAGGTCAAAAAGAAATCTGTACATTTGTATGCAAGAAGACA  699

seq1  TGTTTGTTAGTATTACAGCTACCCTGCTGTGAAATTGATAAAACATGGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTAGTATTACAGCTACCCTGCTGTGAAATTGATAAAACATGGCA  749

seq1  GAAACCAAAATATTCCTTGCTGGAGGAGTTGCTGATGCCAGGGTACATTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCAAAATATTCCTTGCTGGAGGAGTTGCTGATGCCAGGGTACATTA  799

seq1  TTATAATGGAGTGTTAGTAACTATTGATGATTCTAACTTACATTCTGGAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATGGAGTGTTAGTAACTATTGATGATTCTAACTTACATTCTGGAT  849

seq1  GCAGTCAAAAGTGCTAAAGTCACTCTGAAAACACAGCCAGAGTACAGCTG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCAAAAGTGCTAAAGTCACTCTGAAAACACAGCCAGAGTACAGCTG  899

seq1  TTTATTTTGAGCTTTAAGTTTAAAGCATAAAGGACAAATGTCTACAGGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTGAGCTTTAAGTTTAAAGCATAAAGGACAAATGTCTACAGGTT  949

seq1  CATCTGCACTATAAGTTTGAAAATAATTACAGTTTTTAAAATGTAGGATA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTGCACTATAAGTTTGAAAATAATTACAGTTTTTAAAATGTAGGATA  999

seq1  ATAATTTCCTTTGTGCATATATAAAGAACTCAAGAAGGTGGACTTCAGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTTCCTTTGTGCATATATAAAGAACTCAAGAAGGTGGACTTCAGAA  1049

seq1  AATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAAATAACCCCATTAAAAAATGGGGCTCAGAACTGAACAAAGAATTC  1099

seq1: chr17_61697536_61698129
seq2: B6Ng01-054N04.g_193_786

seq1  AGATCAAAAATTCAGGTGACAGCAGATGTTGGCGAGGATGTGGAGAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCAAAAATTCAGGTGACAGCAGATGTTGGCGAGGATGTGGAGAAAGA  50

seq1  GGAACACTCCTCCATTGATGGTGGGATTGCAAGCTTGTACAACCACTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACACTCCTCCATTGATGGTGGGATTGCAAGCTTGTACAACCACTCTG  100

seq1  GAAATCAGTCTGGTAGTTCCTCAAAAAACTGGACATAGTACTACCGAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCAGTCTGGTAGTTCCTCAAAAAACTGGACATAGTACTACCGAAGG  150

seq1  ATCCCGCAATACCTCTCCTGGGTACATATCCAGATGCTCCAACCGGTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCGCAATACCTCTCCTGGGTACATATCCAGATGCTCCAACCGGTAAG  200

seq1  AAGGACACATGTTCCACTATCTTCATAGCAGCCTTATTTTATGTTCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACACATGTTCCACTATCTTCATAGCAGCCTTATTTTATGTTCCTTC  250

seq1  TATGGGGCTTCAGTCCCCTTCTACTCCCTGGGTATTTCTCTGGCTCCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGGGCTTCAGTCCCCTTCTACTCCCTGGGTATTTCTCTGGCTCCTTC  300

seq1  ATTGGGGACCTTGTGCTCCATCCAATGGATGACTGTGAGCATCCACTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGGACCTTGTGCTCCATCCAATGGATGACTGTGAGCATCCACTTCT  350

seq1  GTATTTGCCAGGCACTGGCAGAGCCTCACAGAAGACAGCTATATCAGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTGCCAGGCACTGGCAGAGCCTCACAGAAGACAGCTATATCAGGTT  400

seq1  CCTGTCAGCAGGCTTTTGTTGGCATCTGCCTAGTGTCTGGGTTTGGTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCAGCAGGCTTTTGTTGGCATCTGCCTAGTGTCTGGGTTTGGTGGT  450

seq1  TGTTTATGAGGTGGATTCCCAAATGGGGCAGTCTTAGTCTTCTTTCCAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATGAGGTGGATTCCCAAATGGGGCAGTCTTAGTCTTCTTTCCAGG  500

seq1  TTTTAAGAGGAAATCCATCTTTCTATTGAACCCCCTTTGTTTGTATCTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGAGGAAATCCATCTTTCTATTGAACCCCCTTTGTTTGTATCTTG  550

seq1  GCTGCATGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  594
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCATGCATGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG  594