BAC Information

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BAC

Clone NameB6Ng01-060J24
Chromosome17 (Build37)
Map Location 42,613,177 - 42,613,512
singlet/doubletsinglet
Overlap geneLOC627626
Upstream genenone
Downstream geneOpn5, Gpr115, Gpr111, EG546797, Cd2ap, Tnfrsf21, LOC100043770, Gpr110, Gpr116, Mep1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060J24.bB6Ng01-060J24.g
ACCDH881549DH881550
length344754
definitionDH881549|Mus musculus domesticus DNA, BAC clone: B6Ng01-060J24, 5' end.DH881550|Mus musculus domesticus DNA, BAC clone: B6Ng01-060J24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
tcaagtgggcagaggttacttatgagcaaagaaaactggctcaagacaca
tttacaattcccatcagaagaaaaaggagtacacagaaaaattagggtag
gaatttacttctgtggaatcaaaaatcccagaataagaaaagttaattta
aaatttttgcttttgaaaaggctattttcagataggctgctttgaaagat
aaaggaaaaccctgaccaatccttcttcaggatgaactcttcactaatat
ctaccactgtttgtttgaagagatgtattttattttttgtgtataggtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gaattcataacatctatgctccaactttaagggcccccacatctgtaaaa
gaaccatcactaaagcttaaaacacacatcacacatcacacattattagc
aggagaccaccgcaacactacaatctcacaaatagacaagtcatccggac
aatctaaacagcgaaataatggagacaacagagtttatgaatcaagtgga
cctaccagatatctacagaacatttcacccaaacacaaaagaatacaccg
cagcacatcactggaactttctccaaaactgaccacacagtaggtcacaa
agcaagtctcaatagacataagaaaattgaaataaccccctgaattctat
cagaccaccatgggttaaacctggatttcaacaacagaaacaacagaaag
cctattactaatggaaactgaacatctctccatggaatgaccacgaggtc
aaggcagaaataaagaaagaaattaaagattcctagattcaatgaaaatg
attgcatggcatccccaaacttatgggacacaatgaaagatgagctaaga
ggaaagtatacagtactaagtgcctgcataaagaaattggagaattccca
ctcaaaagatttaaaagtataccttaaagccctagaaaaaagtggcaaat
acacccaagaaatgaaaatgaccacaatagatccatagggagtgacatta
ttggaggtgaggtgtgggcttgttggaggaagtgtatcattaggggtgtg
ggtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_42613177_42613512
seq2: B6Ng01-060J24.b_48_383

seq1  GAATTCTCAAGTGGGCAGAGGTTACTTATGAGCAAAGAAAACTGGCTCAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAGTGGGCAGAGGTTACTTATGAGCAAAGAAAACTGGCTCAA  50

seq1  GACACATTTACAATTCCCATCAGAAGAAAAAGGAGTACACAGAAAAATTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACATTTACAATTCCCATCAGAAGAAAAAGGAGTACACAGAAAAATTA  100

seq1  GGGTAGGAATTTACTTCTGTGGAATCAAAAATCCCAGAATAAGAAAAGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGGAATTTACTTCTGTGGAATCAAAAATCCCAGAATAAGAAAAGTT  150

seq1  AATTTAAAATTTTTGCTTTTGAAAAGGCTATTTTCAGATAGGCTGCTTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAATTTTTGCTTTTGAAAAGGCTATTTTCAGATAGGCTGCTTTG  200

seq1  AAAGATAAAGGAAAACCCTGACCAATCCTTCTTCAGGATGAACTCTTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATAAAGGAAAACCCTGACCAATCCTTCTTCAGGATGAACTCTTCAC  250

seq1  TAATATCTACCACTGTTTGTTTGAAGAGATGTATTTTATTTTTTGTGTAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCTACCACTGTTTGTTTGAAGAGATGTATTTTATTTTTTGTGTAT  300

seq1  AGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  336
      ||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  336