BAC Information

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BAC

Clone NameB6Ng01-063M11
Chromosome17 (Build37)
Map Location 73,006,839 - 73,127,349
singlet/doubletdoublet
Overlap genenone
Upstream geneWdr43, 4632412N22Rik, BC027072, Clip4, Alk
Downstream geneYpel5, Lbh, Lycat, LOC668709, Capn13, LOC100043666, Galnt14
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063M11.bB6Ng01-063M11.g
ACCDH883768DH883769
length7191,082
definitionDH883768|Mus musculus domesticus DNA, BAC clone: B6Ng01-063M11, 5' end.DH883769|Mus musculus domesticus DNA, BAC clone: B6Ng01-063M11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(73,006,839 - 73,007,560)(73,126,250 - 73,127,349)
sequence
gaattcttggggctagagaaaatggtattaaaaaaatcaacatggtaaca
ggcttacaacctgagatttagagagagttgggctcacgaactcattttca
tcttaaaactagtctcgagtcttctagactgaggggggggagccagcaac
tctatgcagggggtgaagggtggggaaaggcagatgatggggggaggcaa
gggggctggaaggagactgtatacagaagacactgagaaaacagacaata
accactcccttaaagctcttctttccccttagctggtccctgtcagcttg
actctgttaattacaccgtgcacctttgtgtctgtttaatacagacacat
tcctttcacgcctgtctcagttcattttatgctcacaacaatcccaggac
ctacgggcaacagccttcttcatatccatttctcctgaggaggaaaggtt
cgctgtgggaatgcctggccactcctggtgcctggccagaagaggaaccc
agagcctgccgttcccctgggcagtctgctctgtacggatctcataattg
ctaatccttggctgggctgtttgttacaggtggagacaaaggtccagagg
gcactcgccaacatctctagatttgcgttatctggaagaggaactggcta
gtgatgggaacagaggctgtctgttaggaaagaggtgctctggaaaagcg
tgagctggaaagctaagct
gaattccaaccagcgatggaggtagatctgaccagtgtgcacctgaggct
ttgaggagaggtgacactcatgccctagggctggatgttcctgtttcagc
gtctgtctctaaagtgagttaaccacatcaggtgtgtgcagagatgacat
gcatgagaaggctggtggctctttgcagagtctacaatgagacaagagag
acccaagaaagaacatccagaggcggaagctattgtcggatagagagcaa
tctccgaatcaatgaaatgttagaacaatttaatattagattaacaggag
aactgtgagttccccaaagtcttaatgtcctccatagcacagctggggca
gctggccaaggaaacttgattagctggagttttacgggaagcagcatttc
ctgtggcaggctttattttgtttttatttttttgtgaatgagaaaacaaa
tgaccctcaagagggatgaccataaaaagaaggtttccccccctaccccc
agcttctctttaatagatgttcttgtgtcaaatgatgctgcgtcttctgg
cagtccttgaacttgttctgtagaccaggctggccttaaatctgcctgct
tctgcttcccaagtgctgggattaaaggcatgcgccaccactctccactc
tgatattgagtcttagtactggcagtctttgttttgagtaggagattagc
attttcctctgtacaacctagaggttgctgcacgggatgcctgcccctac
aacgtgacacaccattttcctagctgtaggaatcaagctgtttgtatgat
ggtccttcctgtgcctttagatatgtgcatgcctcccaggtttacttcac
atttactgattgtaaccaagagaaagcacttagcatattgtcgatgataa
tgtagtaattatgcttatatttgcaggtagctggatttagggttttcttt
ttagaaaaccctttttatgtttcatctttttttttttgggactcaggtaa
atattattatttatatttattataaatattcctattatattcaaaggcta
ccgtcaaggttcccctctgaaaatcccatatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_73006839_73007560
seq2: B6Ng01-063M11.b_48_766

seq1  GAATTCTTGGGGCTAGAGAAAATGGTATTAAAAATATCAACATGGTAACA  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GAATTCTTGGGGCTAGAGAAAATGGTATTAAAAAAATCAACATGGTAACA  50

seq1  GGCTTACAACCTGAGATTTAGAGAGAGTTGGGCTCACGAACTCATTTTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTACAACCTGAGATTTAGAGAGAGTTGGGCTCACGAACTCATTTTCA  100

seq1  TCTTAAAACTAGTCTCGAGTCTTCTAGACTGAGGGGGGGGAGCCAGCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAAACTAGTCTCGAGTCTTCTAGACTGAGGGGGGGGAGCCAGCAAC  150

seq1  TCTATGCAGGGGGTGAAGGGTGGGGAAAGGCAGATGATGGGGGGAGGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCAGGGGGTGAAGGGTGGGGAAAGGCAGATGATGGGGGGAGGCAA  200

seq1  GGGGGCTGGAAGGAGACTGTATACAGAAGACACTGAGAAAACAGACAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCTGGAAGGAGACTGTATACAGAAGACACTGAGAAAACAGACAATA  250

seq1  ACCACTCCCTTAAAGCTCTTCTTTCCCCTTAGCTGGTCCCTGTCAGCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACTCCCTTAAAGCTCTTCTTTCCCCTTAGCTGGTCCCTGTCAGCTTG  300

seq1  ACTCTGTTAATTACACCGTGCACCTTTGTGTCTGTTTAATACAGACACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTTAATTACACCGTGCACCTTTGTGTCTGTTTAATACAGACACAT  350

seq1  TCCTTTCACGCCTGTCTCAGTTCATTTTATGCTCACAACAATCCCAGGAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTCACGCCTGTCTCAGTTCATTTTATGCTCACAACAATCCCAGGAC  400

seq1  CTACGGGCAACAGCCTTCTTCATATCCATTTCTCCTGAGGAGGAAAGGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACGGGCAACAGCCTTCTTCATATCCATTTCTCCTGAGGAGGAAAGGTT  450

seq1  CGCTGTGGGAATGCCTGGCCACTCCTGGTGCCTGGCCAGAAGAGGAACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGTGGGAATGCCTGGCCACTCCTGGTGCCTGGCCAGAAGAGGAACCC  500

seq1  AGAGCCTGCCGTTCCCCTGGGCAGTCTGCTCTGTACGGATCTCATAATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCCTGCCGTTCCCCTGGGCAGTCTGCTCTGTACGGATCTCATAATTG  550

seq1  CTAATCCTTGGCTGGGCTGTTTGTTACAGGTGGAGACAAAGGTCCAGAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCCTTGGCTGGGCTGTTTGTTACAGGTGGAGACAAAGGTCCAGAGG  600

seq1  GCACCCGCCAACATCTCTAGATTTGCGTTATCCTGGAAGAGGAACTGGCT  650
      |||| |||||||||||||||||||||||||| ||||||||||||||||||
seq2  GCACTCGCCAACATCTCTAGATTTGCGTTAT-CTGGAAGAGGAACTGGCT  649

seq1  AGTGATGGGAACAGAGGCAGTCTGTTAGGAAAGAGGTGCTCTGGAGAAGG  700
      |||||||||||||||||| |||||||||||||||||||||||||| || |
seq2  AGTGATGGGAACAGAGGCTGTCTGTTAGGAAAGAGGTGCTCTGGA-AAAG  698

seq1  CGTGAGCTGGGAAGGCTAAGCT  722
      |||||||| |||| ||||||||
seq2  CGTGAGCT-GGAAAGCTAAGCT  719

seq1: chr17_73126250_73127349
seq2: B6Ng01-063M11.g_72_1153 (reverse)

seq1  GATAGGGGATTTTCAGAGGGGAAACTTTGAAAGGGGATAGCATTTGAAAT  50
      |||| |||||||||||||||||| |||     |  | |||| |||| |||
seq2  GATATGGGATTTTCAGAGGGGAACCTT-----GACGGTAGCCTTTG-AAT  44

seq1  ATAAATAAAGAAAATATCTAATAAATAAAATAATAAATAAATAAATATAT  100
      ||||   | ||| || | ||||||||      ||||||||   ||||| |
seq2  ATAA--TAGGAATATTTATAATAAAT------ATAAATAA--TAATAT-T  83

seq1  TACCTGAGTCCAAAAAAAAAAAAGAATGAAACATAAAAA-GGTTTTCTTA  149
      ||||||||||| |||||||||||| |||||||||||||| ||||||||  
seq2  TACCTGAGTCCCAAAAAAAAAAAG-ATGAAACATAAAAAGGGTTTTCT--  130

seq1  AAAAAAGAAAAACCTAAATCCAGCTACCTGCAAATATAAAGCATAATTAC  199
       |||||||||| ||||||||||||||||||||||||| ||||||||||||
seq2  -AAAAAGAAAACCCTAAATCCAGCTACCTGCAAATAT-AAGCATAATTAC  178

seq1  TACATTATCATCGACAATATGCTAAGTGCTTTCTCTTGGTTAC-ATCAGT  248
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TACATTATCATCGACAATATGCTAAGTGCTTTCTCTTGGTTACAATCAGT  228

seq1  AAATGTGAAGTAAACCTGGGAGGCATGCACATATCT-AAGGCACAGGAAG  297
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AAATGTGAAGTAAACCTGGGAGGCATGCACATATCTAAAGGCACAGGAAG  278

seq1  GACCATCATACAAACAGCTTGATTCCTACAGCTAGG-AAATGGTGTGTCA  346
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GACCATCATACAAACAGCTTGATTCCTACAGCTAGGAAAATGGTGTGTCA  328

seq1  CGTTGTAGGGGCAGGCATCCCGTGCAGCAACCTCTAGGTTGTACAGAGGA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTGTAGGGGCAGGCATCCCGTGCAGCAACCTCTAGGTTGTACAGAGGA  378

seq1  AAATGCTAATCTCCTACTCAAAACAAAGACTGCCAGTACTAAGACTCAAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTAATCTCCTACTCAAAACAAAGACTGCCAGTACTAAGACTCAAT  428

seq1  ATCAGAGTGGAGAGTGGTGGCGCATGCCTTTAATCCCAGCACTTGGGAAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGAGTGGAGAGTGGTGGCGCATGCCTTTAATCCCAGCACTTGGGAAG  478

seq1  CAGAAGCAGGCAGATTTAAGGCCAGCCTGGTCTACAGAACAAGTTCAAGG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCAGGCAGATTTAAGGCCAGCCTGGTCTACAGAACAAGTTCAAGG  528

seq1  ACTGCCAGAAGACGCAGCATCATTTGACACAAGAACATCTATTAAAGAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCAGAAGACGCAGCATCATTTGACACAAGAACATCTATTAAAGAGA  578

seq1  AGCTGGGGGTAGGGGGGGAAACCTTCTTTTTATGGTCATCCCTCTTGAGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGGGGTAGGGGGGGAAACCTTCTTTTTATGGTCATCCCTCTTGAGG  628

seq1  GTCATTTGTTTTCTCATTCACAAAAAAATAAAAACAAAATAAAGCCTGCC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTTGTTTTCTCATTCACAAAAAAATAAAAACAAAATAAAGCCTGCC  678

seq1  ACAGGAAATGCTGCTTCCCGTAAAACTCCAGCTAATCAAGTTTCCTTGGC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAATGCTGCTTCCCGTAAAACTCCAGCTAATCAAGTTTCCTTGGC  728

seq1  CAGCTGCCCCAGCTGTGCTATGGAGGACATTAAGACTTTGGGGAACTCAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTGCCCCAGCTGTGCTATGGAGGACATTAAGACTTTGGGGAACTCAC  778

seq1  AGTTCTCCTGTTAATCTAATATTAAATTGTTCTAACATTTCATTGATTCG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCCTGTTAATCTAATATTAAATTGTTCTAACATTTCATTGATTCG  828

seq1  GAGATTGCTCTCTATCCGACAATAGCTTCCGCCTCTGGATGTTCTTTCTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGCTCTCTATCCGACAATAGCTTCCGCCTCTGGATGTTCTTTCTT  878

seq1  GGGTCTCTCTTGTCTCATTGTAGACTCTGCAAAGAGCCACCAGCCTTCTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTCTCTTGTCTCATTGTAGACTCTGCAAAGAGCCACCAGCCTTCTC  928

seq1  ATGCATGTCATCTCTGCACACACCTGATGTGGTTAACTCACTTTAGAGAC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCATGTCATCTCTGCACACACCTGATGTGGTTAACTCACTTTAGAGAC  978

seq1  AGACGCTGAAACAGGAACATCCAGCCCTAGGGCATGAGTGTCACCTCTCC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACGCTGAAACAGGAACATCCAGCCCTAGGGCATGAGTGTCACCTCTCC  1028

seq1  TCAAAGCCTCAGGTGCACACTGGTCAGATCTACCTCCATCGCTGGTTGGA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCCTCAGGTGCACACTGGTCAGATCTACCTCCATCGCTGGTTGGA  1078

seq1  ATTC  1100
      ||||
seq2  ATTC  1082