BAC Information

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BAC

Clone NameB6Ng01-066K09
Chromosome17 (Build37)
Map Location 64,423,466 - 64,424,589
singlet/doubletsinglet
Overlap geneFert2
Upstream geneFbxl17, Ppia-ps17_1026.1, LOC638867, LOC668677, A930002H24Rik
Downstream geneLOC669778, Pja2, LOC100043582, Man2a1, 4930583I09Rik, LOC100043871
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-066K09.bB6Ng01-066K09.g
ACCDH885771DH885772
length1,1771,112
definitionDH885771|Mus musculus domesticus DNA, BAC clone: B6Ng01-066K09, 5' end.DH885772|Mus musculus domesticus DNA, BAC clone: B6Ng01-066K09, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctttgagccccatttttaaatggagttatttgatt
ttctggggtccagcttcttgagctctttatatatattggatattagtccc
ctatctgatttaggattggtaaagatcctttcccaatctgttggtggcct
ttttgtcttattgacggtgtcttttgccctgcagaagctttgcaattttg
caggtcgcatttgtctattctcgatcttacagcacaagccattgctgacc
tattcaggaaattttcccctgtgcccatatcttcgaggcttttccccact
ttctcctctataagtttcactgtctctgattttatgtggagttccttgat
ccacttagatttgaccttagtacaaggagataggaatggatcaattcaaa
ttcttctacatgataaccgccagttgtgccagcaccatttgttgaaaatg
ctgtcttttttccactggatggttttagctcccttgtcaaagatcaagtg
accataggtgtgtgggttcatctctgggtcttcaattctgttccattggt
ctacttgtctgtcactataccagtatcatgcagtttttatcacaattgct
ctgtagtacagctttaggtcgggcatggtgattccaccagaggttctttt
atccttgagtagaggttttgctatcctaggttttttgttattccagatga
atttgcagattgccctttctaatttcttgaagaattgagttggaattttg
atggggattgaattgaatctgtagattgcatttggcaagatagccatctt
tactatattgatcctgccatccatgagcatgggagatatttccatctttt
gagatctttaatttctttcttcagagacctgaagttttcatcatacagat
ctttcacttccttagagtcacaccaaggtattttttattatttgtgacta
atgtgaaggggttgtttccctaattctttcctcagctgtttatctttggg
tagagagggccatggacttgtttgagttaaatttatatccagcgactcac
tgagctgtttatataggttagagttctttgttgaatttaaggcacttata
tatacatcatatcaccttcgaaaggaattgagtatactttccactggagc
ctgagtcccttttgtgctcaatcgctc
gaattctaggagataggagatggctcggtgagtgaagtgcttcctgagcc
agtatgagggcctgagtcggctcccagacacccatgtagaagcctggatg
gacatggttgtgcatgctagaaccccagtactggggacatggacacagga
agatacctggaactctgtctcatccagggaactccaggttcagtgagaaa
aagtgtctcaaaaaataacataggaagcggtagagaaagacacgccatgt
caacctcagacctgcacacacatacatacgtgtgcacgtgtatgcgtgcg
cacgcgcgcacacacacacataagagttctaaataattacttaaatagag
cccccgaaatacaactgcaattcagtatttgcctctattacaagtctgtt
tttaaatgtatgataacatacaactaaaccaagtaaactcatgaaacaag
ttaacattctagcatcaaggaagttgaattaagtaggatttctctgtgat
tcactgatgagttgataatcctttttctccaattactgttactgttgaca
taatctgagtttatgttaaatatgatcagtttcttagagctccatcacaa
cacaacaatagcaagacccatgtttcctgtcatggagtttagaaatgctt
gtgaatgatgctggaaatgccagcctccccccttaagctctcttcttcct
gcccatgctcacctttctgctttcatgaccctcagacccctgctgtttct
gtaagcctctggtgtctagtacagactaaaactgcattgtaacttttcag
tacagatagagtttaggaagcgtttacagctgtagacttccctgggacct
ttccaggaaacgtccctgctttttaccctccctgtaattctcggagctag
gagtgcctctgttatgctcttctggattgctggagtgctggtgagagcag
gtgctatttggatgtagcgtcctttgtagttggtgctctcctcacagctt
ctctcttggtctgtgctttgaatgctggtgcttagctcgccaggttctca
tcaggttgtctgccagttggtttgtagcatcttctcaaccctgtaaaagg
tatgacttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_64423466_64424589
seq2: B6Ng01-066K09.g_71_1182

seq1  GAATTCTAGGAGATAGGAGATGGCTCGGTGAGTGAAGTGCTTCCTGAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGAGATAGGAGATGGCTCGGTGAGTGAAGTGCTTCCTGAGCC  50

seq1  AGTATGAGGGCCTGAGTCGGCTCCCAGACACCCATGTAGAAGCCTGGATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGAGGGCCTGAGTCGGCTCCCAGACACCCATGTAGAAGCCTGGATG  100

seq1  GACATGGTTGTGCATGCTAGAACCCCAGTACTGGGGACATGGACACAGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGGTTGTGCATGCTAGAACCCCAGTACTGGGGACATGGACACAGGA  150

seq1  AGATACCTGGAACTCTGTCTCATCCAGGGAACTCCAGGTTCAGTGAGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCTGGAACTCTGTCTCATCCAGGGAACTCCAGGTTCAGTGAGAAA  200

seq1  AAGTGTCTCAAAAAATAACATAGGAAGCGGTAGAGAAAGACACGCCATGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCTCAAAAAATAACATAGGAAGCGGTAGAGAAAGACACGCCATGT  250

seq1  CAACCTCAGACCTGCACACACATACATACGTGTGCACGTGTATGCGTGCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTCAGACCTGCACACACATACATACGTGTGCACGTGTATGCGTGCG  300

seq1  CACGCGCGCACACACACACATAAGAGTTCTAAATAATTACTTAAATAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGCGCGCACACACACACATAAGAGTTCTAAATAATTACTTAAATAGAG  350

seq1  CCCCCGAAATACAACTGCAATTCAGTATTTGCCTCTATTACAAGTCTGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCGAAATACAACTGCAATTCAGTATTTGCCTCTATTACAAGTCTGTT  400

seq1  TTTAAATGTATGATAACATACAACTAAACCAAGTAAACTCATGAAACAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATGTATGATAACATACAACTAAACCAAGTAAACTCATGAAACAAG  450

seq1  TTAACATTCTAGCATCAAGGAAGTTGAATTAAGTAGGATTTCTCTGTGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATTCTAGCATCAAGGAAGTTGAATTAAGTAGGATTTCTCTGTGAT  500

seq1  TCACTGATGAGTTGATAATCCTTTTTCTCCAATTACTGTTACTGTTGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGATGAGTTGATAATCCTTTTTCTCCAATTACTGTTACTGTTGACA  550

seq1  TAATCTGAGTTTATGTTAAATATGATCAGTTTCTTAGAGCTCCATCACAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTGAGTTTATGTTAAATATGATCAGTTTCTTAGAGCTCCATCACAA  600

seq1  CACAACAATAGCAAGACCCATGTTTCCTGTCATGGAGTTTAGAAATGCTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAACAATAGCAAGACCCATGTTTCCTGTCATGGAGTTTAGAAATGCTT  650

seq1  GTGAATGATGCTGGAAATGCCAGCCTCCCCCCTTAAGCTCTCTTCTTCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGATGCTGGAAATGCCAGCCTCCCCCCTTAAGCTCTCTTCTTCCT  700

seq1  GCCCATGCTCACCTTTCTGCTTTCATGACCCTCAGACCCCTGCTGTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATGCTCACCTTTCTGCTTTCATGACCCTCAGACCCCTGCTGTTTCT  750

seq1  GTAAGCCTCTGGTGTCTAGTACAGACTAAAACTGCATTGTAACTTTTCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGCCTCTGGTGTCTAGTACAGACTAAAACTGCATTGTAACTTTTCAG  800

seq1  TACAGATAGAGTTTAGGAAGCGTTTACAGCTGTAGACTTCCCTGGGACCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGATAGAGTTTAGGAAGCGTTTACAGCTGTAGACTTCCCTGGGACCT  850

seq1  TTCCAGGAAACGTCCCTGCTTTTTACCCTCCCTGTAATTCTCGGAGCTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGGAAACGTCCCTGCTTTTTACCCTCCCTGTAATTCTCGGAGCTAG  900

seq1  GAGTGCCTTCTGTTATGCTCTTCTGGATTGCTGGAGTGCTGGTGAGAGCA  950
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCC-TCTGTTATGCTCTTCTGGATTGCTGGAGTGCTGGTGAGAGCA  949

seq1  GGGTGCTATTTGGATGTAGCGTCCTTTGTAAGTTGGTGCTCCTCCTCACA  1000
       |||||||||||||||||||||||||||| |||||||||| |||||||||
seq2  -GGTGCTATTTGGATGTAGCGTCCTTTGT-AGTTGGTGCT-CTCCTCACA  996

seq1  GCTTCCTCTCTTGGTCTGTGCTTTGAATGCTGGTGCCTTAGCTCGCCCAG  1050
      |||| |||||||||||||||||||||||||||||| ||||||||| ||||
seq2  GCTT-CTCTCTTGGTCTGTGCTTTGAATGCTGGTG-CTTAGCTCG-CCAG  1043

seq1  GTTCTCATCAGTTTGTCTGCACAGTTGTGTTTGTTGGCATTCTTTCTCAA  1100
      ||||||||||| |||||||| |||||| ||||| | ||||   |||||||
seq2  GTTCTCATCAGGTTGTCTGC-CAGTTG-GTTTG-TAGCAT--CTTCTCAA  1088

seq1  CACCCTTGTAAA---TAGGTTTTGTTT  1124
         || ||||||   || |  ||||||
seq2  ---CCCTGTAAAAGGTATGACTTGTTT  1112