BAC Information

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BAC

Clone NameB6Ng01-067G09
Chromosome17 (Build37)
Map Location 91,271,538 - 91,410,080
singlet/doubletdoublet
Overlap geneNrxn1
Upstream geneLOC100043906
Downstream geneEG668871, LOC668872, LOC627235, LOC100043741, LOC100043742
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067G09.bB6Ng01-067G09.g
ACCDH886300DH886301
length1,1201,094
definitionDH886300|Mus musculus domesticus DNA, BAC clone: B6Ng01-067G09, 5' end.DH886301|Mus musculus domesticus DNA, BAC clone: B6Ng01-067G09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,408,948 - 91,410,080)(91,271,538 - 91,272,638)
sequence
gaattccattttaagtatcttttttgctttttatcatttcaaatctaaaa
agccaaattgttagataggtgaaaagttgttgaagtctaactgtgctagg
gccttggagtccatctggtctgcatcccattctagtcagtaaattacaaa
gtttattaaaattgtgcaacagctttgattcaaattttcatcaaaataat
taaattttataaaaattggatttatgtttctaaatatacaagatataatt
taattaccctgaataaatggtgcctatacttcacaggtaaaagagctttg
tgattaaaaataattttgactcagttactatttaaatgtttttcttatag
tttggaagatttatttcccacagatacactcagattagtttagggtctat
gtgactaattgatgagttgctgaacatcggcaatatagagagaagatcac
aggactgggtatgagagagtctgactgatgtttatagaataatgaataaa
gcacatatttgtacccttggatcttagttgtttctttctccttgtgtgat
aattattatgtcagtttattaagtgagattacacaagattaaagtgtgcc
ttgagttagtgatgagtatcttctgcatcatcaactttaacaacagcctt
ccttaagcaataacgaccaaggcaaaaaagtgggtggatatatacccctt
tgatgcctcttgattctcttaatagcttgagtggaacagatactagaatc
ttacttgttcttctccctccaaaatatttaccgtcttactgctgtgacaa
gttactatagttcctaatggtgtagtgacctttcagccacagatttatta
ttgctactgcttcataactgtaatttgctaatgttatagattgtattgta
aatacctgtagttttggatggtcttctgtgaccctgcgaaaggttcactt
gaattccaaagagcttgcatcacaagttgagactgctgatttaagagcat
aatttaggatgatgcatagcgataaaaagtttgcttgaaaaaactcacac
taactcagagttcctttatagaagaaataagaccgcaattaaagtcattg
ttacatatatgagcaaatat
gaattcctttattaacacactggcacatttcatgaaaaggtgatgtctag
gagacggtttttaaaaaagtatctctgtcaaggtccatcgcctcacaggg
attcagcacaatattatatattaaatataaagtgtgatatagagcgtgat
tagggattgaggtatagcccaaagaggaccatatctttaaggaattattt
aagtatgattttaacaagatgtggaaactaatcaactcaagtattaaagt
taatataaaccattaagcatatgttccaaaaatttttgaagaaaatactg
aaaaatttaccacaaattctatatttgaagagaaacatgtttaagtttat
ttaaaacattcagtattaaataatcaacaataacatcaaataaataagca
cacaaatacaattattgattgtgatattagtttaaaataaatttgataaa
agcaaaatgaaaattcataggaaattaaatgtaaccaaaaaggtaaatca
ttccacaatgaggtctgagtgtgcatccttagagccatgtctaaatactt
tacattacccatccacttgcctagccattgtaaaatctactatagactca
atgtaatatgaatgaggaaatattaggtaagtgcttttatagagcaaaag
gcttaaatgtaatccacatttcattgcaaaaatgaagtgctcatttatta
aatattttagtattttaaactatcatctctctatttgcagtgatacagag
aatggcttactgtttggtggctattaaaattcataaagtagaacatgatt
ttgtttttctgaaccttcaggtttccagaaaacataagaatttaaatttt
aatctggaagacacaaatgatttctctgggtaagagttagaacatccttg
ggtcaggggagagagacagtttacagggatatacacatgtcttcaagaac
cagatcaaggacactgacttgtttcacatgagttgtcaaacactgtcaga
cagcattgatgtgagggaacttcctccatgagatgattctaatggctctt
tgaagaaggaataataattcttatcttttacttcatagtgaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_91408948_91410080
seq2: B6Ng01-067G09.b_46_1165 (reverse)

seq1  ATATTTGCTTCATATATATGTAACAATGACTTTTTAATTGCTGTCTTAAT  50
      |||||||||    |||||||||||||||||  ||||||||| ||||| ||
seq2  ATATTTGCT---CATATATGTAACAATGAC--TTTAATTGCGGTCTT-AT  44

seq1  TTCTTCTATAAAAGGAACTCTGGGTTAGTGGTGAGTTTTTTTCAAGCAAA  100
      ||||||||| |||||||||||| |||||| ||||| ||||||||||||||
seq2  TTCTTCTAT-AAAGGAACTCTGAGTTAGT-GTGAG-TTTTTTCAAGCAAA  91

seq1  CCTTTTTATCGCTATGCATCATCCTAAATTATGCTCTTAAATCAGCAGTT  150
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  -CTTTTTATCGCTATGCATCATCCTAAATTATGCTCTTAAATCAGCAG-T  139

seq1  CTCAACCTTGTGATTGCAAGCTCTTTGGAATTCAAGTGAACCTTTCGCAG  200
      ||||| ||||||| ||||||||||||||||||||||||||||||||||| 
seq2  CTCAA-CTTGTGA-TGCAAGCTCTTTGGAATTCAAGTGAACCTTTCGCA-  186

seq1  GGGTCACAGAAGACCATCCAAAACTACAGGTATTTACAATACAATCTATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCACAGAAGACCATCCAAAACTACAGGTATTTACAATACAATCTATA  236

seq1  ACATTAGCAAATTACAGTTATGAAGCAGTAGCAATAATAAATCTGTGGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTAGCAAATTACAGTTATGAAGCAGTAGCAATAATAAATCTGTGGCT  286

seq1  G-AAGGTCACTACACCATTAGGAACTATAGTAACTTGTCACAGCAGTAAG  349
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTCACTACACCATTAGGAACTATAGTAACTTGTCACAGCAGTAAG  336

seq1  ACGGTAAATATTTTGGAGGGAGAAGAACAAGTAAGATTCTAGTATCTGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTAAATATTTTGGAGGGAGAAGAACAAGTAAGATTCTAGTATCTGTT  386

seq1  CCACTCAAGCTATTAAGAGAATCAAGAGGCATCAAAGGGGTATATATCCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCAAGCTATTAAGAGAATCAAGAGGCATCAAAGGGGTATATATCCA  436

seq1  CCCACTTTTTTGCCTTGGTCGTTATTGCTTAAGGAAGGCTGTTGTTAAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTTTTTGCCTTGGTCGTTATTGCTTAAGGAAGGCTGTTGTTAAAG  486

seq1  TTGATGATGCAGAAGATACTCATCACTAACTCAAGGCACACTTTAATCTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGATGCAGAAGATACTCATCACTAACTCAAGGCACACTTTAATCTT  536

seq1  GTGTAATCTCACTTAATAAACTGACATAATAATTATCACACAAGGAGAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAATCTCACTTAATAAACTGACATAATAATTATCACACAAGGAGAAA  586

seq1  GAAACAACTAAGATCCAAGGGTACAAATATGTGCTTTATTCATTATTCTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAACTAAGATCCAAGGGTACAAATATGTGCTTTATTCATTATTCTA  636

seq1  TAAACATCAGTCAGACTCTCTCATACCCAGTCCTGTGATCTTCTCTCTAT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACATCAGTCAGACTCTCTCATACCCAGTCCTGTGATCTTCTCTCTAT  686

seq1  ATTGCCGATGTTCAGCAACTCATCAATTAGTCACATAGACCCTAAACTAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCCGATGTTCAGCAACTCATCAATTAGTCACATAGACCCTAAACTAA  736

seq1  TCTGAGTGTATCTGTGGGAAATAAATCTTCCAAACTATAAGAAAAACATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAGTGTATCTGTGGGAAATAAATCTTCCAAACTATAAGAAAAACATT  786

seq1  TAAATAGTAACTGAGTCAAAATTATTTTTAATCACAAAGCTCTTTTACCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGTAACTGAGTCAAAATTATTTTTAATCACAAAGCTCTTTTACCT  836

seq1  GTGAAGTATAGGCACCATTTATTCAGGGTAATTAAATTATATCTTGTATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTATAGGCACCATTTATTCAGGGTAATTAAATTATATCTTGTATA  886

seq1  TTTAGAAACATAAATCCAATTTTTATAAAATTTAATTATTTTGATGAAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGAAACATAAATCCAATTTTTATAAAATTTAATTATTTTGATGAAAA  936

seq1  TTTGAATCAAAGCTGTTGCACAATTTTAATAAACTTTGTAATTTACTGAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAATCAAAGCTGTTGCACAATTTTAATAAACTTTGTAATTTACTGAC  986

seq1  TAGAATGGGATGCAGACCAGATGGACTCCAAGGCCCTAGCACAGTTAGAC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATGGGATGCAGACCAGATGGACTCCAAGGCCCTAGCACAGTTAGAC  1036

seq1  TTCAACAACTTTTCACCTATCTAACAATTTGGCTTTTTAGATTTGAAATG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACAACTTTTCACCTATCTAACAATTTGGCTTTTTAGATTTGAAATG  1086

seq1  ATAAAAAGCAAAAAAGATACTTAAAATGGAATTC  1133
      ||||||||||||||||||||||||||||||||||
seq2  ATAAAAAGCAAAAAAGATACTTAAAATGGAATTC  1120

seq1: chr17_91271538_91272638
seq2: B6Ng01-067G09.g_67_1160

seq1  GAATTCCTTTATTAACACACTGGCACATTTCATGAAAAGGTGATGTCTAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTATTAACACACTGGCACATTTCATGAAAAGGTGATGTCTAG  50

seq1  GAGACGGTTTTTAAAAAAGTATCTCTGTCAAGGTCCATCGCCTCACAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACGGTTTTTAAAAAAGTATCTCTGTCAAGGTCCATCGCCTCACAGGG  100

seq1  ATTCAGCACAATATTATATATTAAATATAAAGTGTGATATAGAGCGTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGCACAATATTATATATTAAATATAAAGTGTGATATAGAGCGTGAT  150

seq1  TAGGGATTGAGGTATAGCCCAAAGAGGACCATATCTTTAAGGAATTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGATTGAGGTATAGCCCAAAGAGGACCATATCTTTAAGGAATTATTT  200

seq1  AAGTATGATTTTAACAAGATGTGGAAACTAATCAACTCAAGTATTAAAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATGATTTTAACAAGATGTGGAAACTAATCAACTCAAGTATTAAAGT  250

seq1  TAATATAAACCATTAAGCATATGTTCCAAAAATTTTTGAAGAAAATACTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATAAACCATTAAGCATATGTTCCAAAAATTTTTGAAGAAAATACTG  300

seq1  AAAAATTTACCACAAATTCTATATTTGAAGAGAAACATGTTTAAGTTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATTTACCACAAATTCTATATTTGAAGAGAAACATGTTTAAGTTTAT  350

seq1  TTAAAACATTCAGTATTAAATAATCAACAATAACATCAAATAAATAAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACATTCAGTATTAAATAATCAACAATAACATCAAATAAATAAGCA  400

seq1  CACAAATACAATTATTGATTGTGATATTAGTTTAAAATAAATTTGATAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATACAATTATTGATTGTGATATTAGTTTAAAATAAATTTGATAAA  450

seq1  AGCAAAATGAAAATTCATAGGAAATTAAATGTAACCAAAAAGGTAAATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATGAAAATTCATAGGAAATTAAATGTAACCAAAAAGGTAAATCA  500

seq1  TTCCACAATGAGGTCTGAGTGTGCATCCTTAGAGCCATGTCTAAATACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACAATGAGGTCTGAGTGTGCATCCTTAGAGCCATGTCTAAATACTT  550

seq1  TACATTACCCATCCACTTGCCTAGCCATTGTAAAATCTACTATAGACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTACCCATCCACTTGCCTAGCCATTGTAAAATCTACTATAGACTCA  600

seq1  ATGTAATATGAATGAGGAAATATTAGGTAAGTGCTTTTATAGAGCAAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATATGAATGAGGAAATATTAGGTAAGTGCTTTTATAGAGCAAAAG  650

seq1  GCTTAAATGTAATCCACATTTCATTGCAAAAATGAAGTGCTCATTTATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAATGTAATCCACATTTCATTGCAAAAATGAAGTGCTCATTTATTA  700

seq1  AATATTTTAGTATTTTAAACTATCATCTCTCTATTTGCAGTGATACAGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTTAGTATTTTAAACTATCATCTCTCTATTTGCAGTGATACAGAG  750

seq1  AATGGCTTACTGTTTGGTGGCTATTAAAATTCATAAAGTAGAACATGATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTTACTGTTTGGTGGCTATTAAAATTCATAAAGTAGAACATGATT  800

seq1  TTGTTTTTCTGAACCTTCAGG-TTCCAGAAAACATAAGAATTTAAATTTT  849
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TTGTTTTTCTGAACCTTCAGGTTTCCAGAAAACATAAGAATTTAAATTTT  850

seq1  AATCTGGAAGACACAAATGATTTCTCTGGGTAAGGAGTTAGAACATCCTT  899
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AATCTGGAAGACACAAATGATTTCTCTGGGTAA-GAGTTAGAACATCCTT  899

seq1  GGGTCAGGGGAGAGAAGACAGTTTACAGTGATATACACATGTCTTCAAGA  949
      |||||||||||||| ||||||||||||| |||||||||||||||||||||
seq2  GGGTCAGGGGAGAG-AGACAGTTTACAGGGATATACACATGTCTTCAAGA  948

seq1  ACCAGATCAAGGACACTGACATGTTTCACATGAGTTGTCAAACACCTGTC  999
      |||||||||||||||||||| ||||||||||||||||||||||| |||||
seq2  ACCAGATCAAGGACACTGACTTGTTTCACATGAGTTGTCAAACA-CTGTC  997

seq1  AGACAGCAGTGATGTGAGGGAACCTCCTCCATGAGATGAATCTAAATGGC  1049
      |||||||| |||||||||||||| ||||||||||||||| ||| ||||||
seq2  AGACAGCATTGATGTGAGGGAACTTCCTCCATGAGATGATTCT-AATGGC  1046

seq1  TCTATGAAGGAGGAATAAATAATTCCTTATCTTTTACCTTCAATAGTGAA  1099
      ||| ||||| |||||| ||||||| ||||||||||| |||| ||||||||
seq2  TCTTTGAAGAAGGAAT-AATAATT-CTTATCTTTTA-CTTC-ATAGTGAA  1092

seq1  AA  1101
      ||
seq2  AA  1094