BAC Information

Click to search

BAC

Clone NameB6Ng01-073N12
Chromosome17 (Build37)
Map Location 65,457,009 - 65,572,256
singlet/doubletdoublet
Overlap genenone
Upstream geneFert2, LOC669778, Pja2, LOC100043582, Man2a1, 4930583I09Rik, LOC100043871
Downstream geneE130009J12Rik, LOC668655, LOC674701, Vapa, Txndc2, Rab31, Ppp4r1, Ralbp1, LOC100043873, LOC100043592, Twsg1, Ankrd12, 5430411C19Rik, Ndufv2, ORF19, Ddx11, LOC100043599
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-073N12.bB6Ng01-073N12.g
ACCDH890854DH890855
length1,0291,119
definitionDH890854|Mus musculus domesticus DNA, BAC clone: B6Ng01-073N12, 5' end.DH890855|Mus musculus domesticus DNA, BAC clone: B6Ng01-073N12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(65,571,726 - 65,572,256)(65,457,009 - 65,458,138)
sequence
gaattctttaatcaaagcccacttcctagtttgatacagtttgaatgatg
gtctctactcaaacattcattctgacatttcattctcatggaatggtaga
aagagctgtagcctttaggggctcactaagacaaatgtggtcccttcacg
agttgtattagctcacatgtggaagggctgacattgaagggaacgctttc
ttccttccctgccttctactctgtggggccatgatgataagatcccacac
tgtctgatgcagagaggcagcactcatgacatacaagtactggtacccta
accttggactcctcagggtccagaacagtaagtcctgaatttctgttatt
cacaaaatagccaatccacagcatcgtattctagcaacacgaggtatctt
ctgtcttccagaggctgcctatatattcttaagcctacaactcacctttc
taactatattcttctttctaactctgacttgcctttctccttcctatgag
gataatatgactgactagtgctacgctctccggtcgagtcagctggacaa
gccgaaaggcttaaaagtcactcatgaggcaaaagagtttcaaggaagct
ctcctcctggagtctagcgttcgctacccatacattaatttttcattcct
gcgttccattaccgcgttagtctagtgtatggatccacgtgctctctttc
agtattttcctattataagtgctttttaaatttgaattctgacatggcta
aagccttccgccagtgttccaacagtcctagaacgtccttgaccaagatc
aagggcttgaaattcagtaagattgtaaaagctaagtcactcccttacac
aggaatttaccatcactaaggaagaaggaagtttcagaccaaaggagaaa
ccagaaactatagcagagttacacccatacacacgtatttacaatggcct
aaggggaaggggactaaacaagagactaaaataggactatggcaagggcg
cgaagcccttgaccctggctctaagctta
gaattcaatcagaaagttgtaggttgctcctataacatttgtatcactat
tgcatcaaggagagtattacctgtccttattgataggcggtgacttattg
atttacttcattttgtaaattatgctctggacattttgattttattttgt
cccattctttctcttttgctgcatctctctctgatttcaaattttctttt
tgcaatattacctcttgatttcgatctcttttgttaaatagtgataagga
aatctttttgaaagagccatgaggatggacgttgaacatcattttatcta
aactaagatgctgagaagcacgaatattccaacaaagtaggagtaaagtc
catgaagaaaatggaatactcttgattcacgaaaagtaagtattcaaata
tttaattaattgagaaaatgtttgctaaaatgccaggcattgatgattcc
taagagtgagaaaggcattggaaagattgttttccttccttattgaaagg
accctgtagatgaaagaagggagcctggctattgctagatggtggataac
ttgttatgaccaaagacaaacagaataattatgatgcctgtgtgaaaggg
ctctagattccctttcatctacaatgagcctatggatctagaagaaatgg
aataataaactctctcaggcagccctcaatgagaagggctaacatatttc
ttattgcctaacaggcatggcccagcacaccagagagcaaagtctgctaa
gaggtttcatgatggagtcccagagtgatatcaagagtagatgctgaggt
ttggaggaatttatgatccttgccatctcactctcatgcatgatatactt
ttatttaaagtattcaatctaccaaatggcattcatgatcatatgaaata
tatcaaagctgtgatgggtataatttgaaacacttgtgctggtcatctcc
aaataaagaaaacagccgcctttgtatttttctttgaagcttttcttcat
ctctttagtcctttctctcggttattgaataatcataacctaatagaaac
atatttaaaattcatatagtaaaattcaaaaaaatgtttagttcaatacc
ttagtgcttgtgctataaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_65571726_65572256
seq2: B6Ng01-073N12.b_41_571 (reverse)

seq1  GGAGAGCGTAGCACTAGTCAGTCATATTATCCTCATAGGAAGGAGAAAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCGTAGCACTAGTCAGTCATATTATCCTCATAGGAAGGAGAAAGG  50

seq1  CAAGTCAGAGTTAGAAAGAAGAATATAGTTAGAAAGGTGAGTTGTAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAGAGTTAGAAAGAAGAATATAGTTAGAAAGGTGAGTTGTAGGCT  100

seq1  TAAGAATATATAGGCAGCCTCTGGAAGACAGAAGATACCTCGTGTTGCTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAATATATAGGCAGCCTCTGGAAGACAGAAGATACCTCGTGTTGCTA  150

seq1  GAATACGATGCTGTGGATTGGCTATTTTGTGAATAACAGAAATTCAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACGATGCTGTGGATTGGCTATTTTGTGAATAACAGAAATTCAGGAC  200

seq1  TTACTGTTCTGGACCCTGAGGAGTCCAAGGTTAGGGTACCAGTACTTGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGTTCTGGACCCTGAGGAGTCCAAGGTTAGGGTACCAGTACTTGTA  250

seq1  TGTCATGAGTGCTGCCTCTCTGCATCAGACAGTGTGGGATCTTATCATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATGAGTGCTGCCTCTCTGCATCAGACAGTGTGGGATCTTATCATCA  300

seq1  TGGCCCCACAGAGTAGAAGGCAGGGAAGGAAGAAAGCGTTCCCTTCAATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCCCACAGAGTAGAAGGCAGGGAAGGAAGAAAGCGTTCCCTTCAATG  350

seq1  TCAGCCCTTCCACATGTGAGCTAATACAACTCGTGAAGGGACCACATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCCCTTCCACATGTGAGCTAATACAACTCGTGAAGGGACCACATTTG  400

seq1  TCTTAGTGAGCCCCTAAAGGCTACAGCTCTTTCTACCATTCCATGAGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTGAGCCCCTAAAGGCTACAGCTCTTTCTACCATTCCATGAGAAT  450

seq1  GAAATGTCAGAATGAATGTTTGAGTAGAGACCATCATTCAAACTGTATCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGTCAGAATGAATGTTTGAGTAGAGACCATCATTCAAACTGTATCA  500

seq1  AACTAGGAAGTGGGCTTTGATTAAAGAATTC  531
      |||||||||||||||||||||||||||||||
seq2  AACTAGGAAGTGGGCTTTGATTAAAGAATTC  531

seq1: chr17_65457009_65458138
seq2: B6Ng01-073N12.g_69_1187

seq1  GAATTCAATCAGAAAGTTGTAGGTTGCTCCTATAACATTTGTATCACTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCAGAAAGTTGTAGGTTGCTCCTATAACATTTGTATCACTAT  50

seq1  TGCATCAAGGAGAGTATTACCTGTCCTTATTGATAGGCGGTGACTTATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCAAGGAGAGTATTACCTGTCCTTATTGATAGGCGGTGACTTATTG  100

seq1  ATTTACTTCATTTTGTAAATTATGCTCTGGACATTTTGATTTTATTTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACTTCATTTTGTAAATTATGCTCTGGACATTTTGATTTTATTTTGT  150

seq1  CCCATTCTTTCTCTTTTGCTGCATCTCTCTCTGATTTCAAATTTTCTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATTCTTTCTCTTTTGCTGCATCTCTCTCTGATTTCAAATTTTCTTTT  200

seq1  TGCAATATTACCTCTTGATTTCGATCTCTTTTGTTAAATAGTGATAAGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATATTACCTCTTGATTTCGATCTCTTTTGTTAAATAGTGATAAGGA  250

seq1  AATCTTTTTGAAAGAGCCATGAGGATGGACGTTGAACATCATTTTATCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTTTGAAAGAGCCATGAGGATGGACGTTGAACATCATTTTATCTA  300

seq1  AACTAAGATGCTGAGAAGCACGAATATTCCAACAAAGTAGGAGTAAAGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGATGCTGAGAAGCACGAATATTCCAACAAAGTAGGAGTAAAGTC  350

seq1  CATGAAGAAAATGGAATACTCTTGATTCACGAAAAGTAAGTATTCAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGAAGAAAATGGAATACTCTTGATTCACGAAAAGTAAGTATTCAAATA  400

seq1  TTTAATTAATTGAGAAAATGTTTGCTAAAATGCCAGGCATTGATGATTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTAATTGAGAAAATGTTTGCTAAAATGCCAGGCATTGATGATTCC  450

seq1  TAAGAGTGAGAAAGGCATTGGAAAGATTGTTTTCCTTCCTTATTGAAAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGTGAGAAAGGCATTGGAAAGATTGTTTTCCTTCCTTATTGAAAGG  500

seq1  ACCCTGTAGATGAAAGAAGGGAGCCTGGCTATTGCTAGATGGTGGATAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGTAGATGAAAGAAGGGAGCCTGGCTATTGCTAGATGGTGGATAAC  550

seq1  TTGTTATGACCAAAGACAAACAGAATAATTATGATGCCTGTGTGAAAGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATGACCAAAGACAAACAGAATAATTATGATGCCTGTGTGAAAGGG  600

seq1  CTCTAGATTCCCTTTCATCTACAATGAGCCTATGGATCTAGAAGAAATGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAGATTCCCTTTCATCTACAATGAGCCTATGGATCTAGAAGAAATGG  650

seq1  AATAATAAACTCTCTCAGGCAGCCCTCAATGAGAAGGGCTAACATATTTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAAACTCTCTCAGGCAGCCCTCAATGAGAAGGGCTAACATATTTC  700

seq1  TTATTGCCTAACAGGCATGGCCCAGCACACCAGAGAGCAAAGTCTGCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTGCCTAACAGGCATGGCCCAGCACACCAGAGAGCAAAGTCTGCTAA  750

seq1  GAGGTTTCATGATGGAGTCCCAGAGTGATATCAAGAGTAGATGCTGAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTCATGATGGAGTCCCAGAGTGATATCAAGAGTAGATGCTGAGGT  800

seq1  TTGGAGGAATTTATGATCCTTGCCATCTCACTCTCATGCATGATATACTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGGAATTTATGATCCTTGCCATCTCACTCTCATGCATGATATACTT  850

seq1  TTATTTAAAGTATTCAATCTACCAAATGGCATTCATGATCATATGAAATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAAAGTATTCAATCTACCAAATGGCATTCATGATCATATGAAATA  900

seq1  TATCAAAGCTGTGATGGGTATAATTTGAAACACTTGTGCTGGTCATCTCC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAAGCTGTGATGGGTATAATTTGAAACACTTGTGCTGGTCATCTCC  950

seq1  AAATAAAGAAAACAAGCCGCCTTTGTATTTTTCTTTGAAGCTTTTCTTCA  1000
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGAAAAC-AGCCGCCTTTGTATTTTTCTTTGAAGCTTTTCTTCA  999

seq1  TTCTCTTTAGTCCTTTCTCTCGGTTATTGAAATAATCATAAACCTAATAG  1050
       |||||||||||||||||||||||||||| ||||||||| ||||||||||
seq2  -TCTCTTTAGTCCTTTCTCTCGGTTATTG-AATAATCAT-AACCTAATAG  1046

seq1  -AACATATTTAAAATTCAATATAGGTAAAAATCAAAAAAAATGTTTAGTT  1099
       |||||||||||||||| ||||| |||||| || ||||||||||||||||
seq2  AAACATATTTAAAATTC-ATATA-GTAAAATTC-AAAAAAATGTTTAGTT  1093

seq1  CAAATACATTAAGTGCTTTGTTGCCTATAAA  1130
      | ||||| || ||||| ||||   |||||||
seq2  C-AATACCTT-AGTGC-TTGT--GCTATAAA  1119