BAC Information

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BAC

Clone NameB6Ng01-078K23
Chromosome17 (Build37)
Map Location 57,242,084 - 57,242,500
singlet/doubletsinglet
Overlap genenone
Upstream geneS3-12, 2310076L09Rik, Lrg1, Sema6b, Tnfaip8l1, D17Wsu104e, Dpp9, LOC668573, A230051N06Rik, Fem1a, Ticam1, M6prbp1, Arrdc5, Uhrf1, Jmjd2b, Ptprs, EG668592, Znrf4, Safb2, Safb, 2410015M20Rik, Rpl36, Lonp1, LOC619718, Tmem146, Ranbp3, Ccpn-ps, AI662250, Ndufa11, Fut4-ps1, Nrtn, Dus3l, Gm546, Rfx2, Acsbg2, 1700061G19Rik, Mllt1, Asah3, Clpp, Alkbh7, Pspn, Gtf2f1, Khsrp, Slc25a41, Slc25a23, Crb3, Dennd1c, Tubb4
Downstream geneTnfsf9, Cd70, Tnfsf14, C3, Gpr108, Trip10, LOC668635, Vav1, Emr1, EG224916, Cntnap5c, LOC674419
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078K23.bB6Ng01-078K23.g
ACCDH894316DH894317
length1,211411
definitionDH894316|Mus musculus domesticus DNA, BAC clone: B6Ng01-078K23, 5' end.DH894317|Mus musculus domesticus DNA, BAC clone: B6Ng01-078K23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccttcaaaataaagaaagattagatctgacccaggaagacctctt
gaaaatcttggctgcaggcatgaaggaagagaccaagatgaacaacaaaa
caggtgacatgaatgctgatccctctacatggggacagctcagagactga
ctaagacatgtctctgcacagccaataaatcttgttggctgcagagtcct
tgggacttattgttgcacgatgtccttggagatggagataagcatgggtg
gagatttatattgcaattctgttatgcagtccaaatggacttaccaagtt
tgactcctttcctgctcgaagagcagagaatcacttctagctggtatgtg
cacagcacacatttttctatacgtgtgttaatccgtaaatttatattacc
tttaaaagtttgtgtgttttcagaataaaggaccagacacccgtgaagat
aagacaaatatcccagataatccagcctcacagatggcctcagtagcggt
ttcctcaaaaatctgcatccagaacaactttaaaatgactagcttaattg
gtccagcctcacagactgttccagccaggacttcagtgaagctctgcact
ttcccatcacacaaacaatggttggcacatgatacagatagctctcccag
gacttggccaatattccagttttcataggaccaaccccccccccaaagtt
gctgttccctccagatagcaggaagtaattttaagaagacacagaattta
gatgctttagtaacataaggcttttcatgaccgtgaggcaggtgtgctgt
ggcaaaactagacactatgcaaaacaaaaacctacccttgcctactgaca
acatgctatctaaagtgtggataagcaggcactgggaagtcaactggcaa
ctttgccagacaaagtaggccagtccttctgtcagatattctgagccagt
aagctgagatggatgcgccaacatgacagaggactctgggtggctgtcag
gtaacagctgtctgtcatttggagctactgcgctgcacttctgctatcaa
gtaacactaatcttgtcggtcctctggatggggggtgaagactaggatag
ttaagtctcatattaagctcgagtgttagggttagaaaaatgattaacgc
taagatggtagtatatagtgcaggttatgtaatgagagtgtattcggtcg
agaaccctctg
aaggccaccttgaactacataatgagaatggaccagccagggctaaatag
tgagacagacagataaacacacacagagacagacagacagacaaacagac
agacaagggggattttaatattaaaattaatttgtttttgaacaggatct
cgtgtagtcaaggctggcctgacattccctatgtagtaaagaataaactt
ctaatcctcctgcctccatttctggagtgctaaattgacaggtccatgcc
accatgtctggtgtataagatgctggggatagaactcaagtctccccctc
ccccctggctcacacacaaagtccaccccctgccccttattgctaagaag
aaagatttagcatctcaggaccgtagtggtagtagtagtagtagtagtag
tagtagtagta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_57242084_57242500
seq2: B6Ng01-078K23.g_68_484 (reverse)

seq1  TACTACTACTACTACTACTACTACTACTACTACCACTACGGTCCTGAGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACTACTACTACTACTACTACTACTACTACCACTACGGTCCTGAGAT  50

seq1  GCTAAATCTTTCTTCTTAGCAATAAGGGGCAGGGGGTGGACTTTGTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAAATCTTTCTTCTTAGCAATAAGGGGCAGGGGGTGGACTTTGTGTGT  100

seq1  GAGCCAGGGGGGAGGGGGAGACTTGAGTTCTATCCCCAGCATCTTATACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGGGGGGAGGGGGAGACTTGAGTTCTATCCCCAGCATCTTATACA  150

seq1  CCAGACATGGTGGCATGGACCTGTCAATTTAGCACTCCAGAAATGGAGGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACATGGTGGCATGGACCTGTCAATTTAGCACTCCAGAAATGGAGGC  200

seq1  AGGAGGATTAGAAGTTTATTCTTTACTACATAGGGAATGTCAGGCCAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGATTAGAAGTTTATTCTTTACTACATAGGGAATGTCAGGCCAGCC  250

seq1  TTGACTACACGAGATCCTGTTCAAAAACAAATTAATTTTAATATTAAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTACACGAGATCCTGTTCAAAAACAAATTAATTTTAATATTAAAAT  300

seq1  CCCCCTTGTCTGTCTGTTTGTCTGTCTGTCTGTCTCTGTGTGTGTTTATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCTTGTCTGTCTGTTTGTCTGTCTGTCTGTCTCTGTGTGTGTTTATC  350

seq1  TGTCTGTCTCACTATTTAGCCCTGGCTGGTCCATTCTCATTATGTAGTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTCTCACTATTTAGCCCTGGCTGGTCCATTCTCATTATGTAGTTC  400

seq1  AAGGTGGCCTTGAATTC  417
      |||||||||||||||||
seq2  AAGGTGGCCTTGAATTC  417