BAC Information

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BAC

Clone NameB6Ng01-080K24
Chromosome7 (Build37)17 (Build37)
Map Location 22,494,692 - 22,495,81642,053,989 - 42,054,540
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604, EG667378
Downstream geneLOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736, EG667444, LOC100043033, LOC100043037, EG667464, EG667469, EG667472, EG667094, LOC100043625, LOC100043626, LOC100043043, LOC100043048, LOC100043632, EG667485, V1rd14, LOC100043051, LOC100043058, EG435947, EG667504, EG667512, LOC100043061, LOC100043638, LOC667527, EG667530, LOC667536, EG667543
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-080K24.bB6Ng01-080K24.g
ACCDH895755DH895756
length1,1181,038
definitionDH895755|Mus musculus domesticus DNA, BAC clone: B6Ng01-080K24, 5' end.DH895756|Mus musculus domesticus DNA, BAC clone: B6Ng01-080K24, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(22,494,692 - 22,495,816)(42,053,989 - 42,054,540)
sequence
gaattcaatcacctgtgacttgccaatgcttgtatcaattctctgctcat
aacatcttttccaaccgcccaagacctcagaggcagcatgcaaaaggtgt
gtcgatttcttcacaagcatttgagtccagaacaacttgattgtactttc
caaaactgttcctttccagtcctgaaagagaatagaatgtccaacagtat
aacaatgagaagtccaggagataactccgtctccaatataccattcctga
gaaaaggtgagaggagatacagtgtcaaagttgtactgtagaaatgggaa
gtttttcaatatttgcataaagcatgagacatggaaaccaatgtgcttgg
aagttagcatcacactccaacaaatactttcaggaagagtcatagcagat
aaattcattactgagatgccttatagaaccatggttaagctgagaaggaa
tgagagatacctgtgccctgctggctctgcttgtacaatggataagtcct
gattatatacttagatgattcaggtttcagtgacattatctaagtctgta
agaaagtagagacatggtcaccataacaaaactttccagttcagaggggt
tttgtgggattacaatagcaattgacagatacaagagtgatagaacctat
ttacacatgctgcaactgggatggattccagtggctttatgccgagtgac
gaaagttaaaaccacagatatgtacacattgtacttacgtaaccttaaga
aaacataaaataactgtaaaatggaagagcatgctgctgatgtggagaga
gaagggtgctgtgcattggtagttcacatatgacccaaaatgtagaatcg
gaaggtgtttggtggtggactatatgtatttcagcagaaatggattacaa
aaccccacatggaggaagtgatacagaatacatctgttttccttatgtgt
cagagccataatgggacaagctaataactggcagataatatataatagca
tgtatatagttataagccagctataagtagatcttctgagatggcctcct
gctcagattattattataatctggtgacaggttcacctaataggcaaagg
cctgtaggattcatttta
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
ttgaatgctttttccgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatgggttacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcaagaattttattgaggatttttgc
attgatattcataagagaaattggtctgaagttctctatctttgttggat
ctttctggggtttaggtatcagagtaattgtggcttcatagaatgagtta
ggtagagttccctctacttctattttgtggaatagtttgtgcagaactgg
gattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctgggagactattaatgactgcttctatttcc
ttaagggatatgggactgtttagatcgttaacttgatcctgacttaactt
tgctacctggtatcagtctagaaacttgtccatttcatccaggttttcca
attttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatatgatgttatgtctcccttttcatttctgattttgttaat
taggatgctgtccccgtgccctctagtgactctagctaagggtttatcta
tcttgttgattttctcaaagaaccaccttctcgtttcctttattccttga
atagttcttcttgtttccacttggttgatttcacccctgagtttgattat
ttcctgccgtctactcctcttgggtgaattgcttccttttttttcagagc
ttttagatgtattgtcaagctgctagtatgtgctctctcccgtttcttcc
tggagcccctcagagctatgagtttcccccttagaaatgctttccatgtg
tcccatagggtttggggactgtgccgctttcattttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_22494692_22495816
seq2: B6Ng01-080K24.b_50_1167 (reverse)

seq1  TAAAATGAATCCCTTACAG--CCTTGCTTAATAAGGGTGAACCTGTCA-C  47
      ||||||||||||  |||||  | |||| || ||  ||||||||||||| |
seq2  TAAAATGAATCC--TACAGGCCTTTGCCTATTA--GGTGAACCTGTCACC  46

seq1  AGATTAT-ATAATAATCTGAAGCAGGAGGCCATCTCAGGAAGATCTACTT  96
      ||||||| ||||||||||| ||||||||||||||||| ||||||||||||
seq2  AGATTATAATAATAATCTG-AGCAGGAGGCCATCTCA-GAAGATCTACTT  94

seq1  ATTAGCTTGCTAATAACTATATAACATGCTATTATATAATTATCTGCCAG  146
      | ||||| ||| |||||||||| |||||||||||||| ||||||||||||
seq2  A-TAGCTGGCTTATAACTATAT-ACATGCTATTATAT-ATTATCTGCCAG  141

seq1  TTATTAGCTTGTCCCATTATGGCTCCTGACACATAAGGAAAACAGATGTA  196
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TTATTAGCTTGTCCCATTATGGCT-CTGACACATAAGGAAAACAGATGTA  190

seq1  TTCTGTATCACTTTCCTCCATGTGGGGTTTTGTAATCCATTTCTGCTGAA  246
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTATCAC-TTCCTCCATGTGGGGTTTTGTAATCCATTTCTGCTGAA  239

seq1  ATACATATAGTCCACCACCAAACACCTTCCGATTCTACATTTTGGGTCAT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATATAGTCCACCACCAAACACCTTCCGATTCTACATTTTGGGTCAT  289

seq1  ATGTGAACTACCAATGCACAGCACCCTTCTCTCTCCACATCAGCAGCATG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGAACTACCAATGCACAGCACCCTTCTCTCTCCACATCAGCAGCATG  339

seq1  CTCTTCCATTTTACAGTTATTTTATGTTTTCTTAAGGTTACGTAAGTACA  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCATTTTACAGTTATTTTATGTTTTCTTAAGGTTACGTAAGTACA  389

seq1  ATGTGTACATATCTGTGGTTTTAACTTTCGTCACTCGGCATAAAGCCACT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTACATATCTGTGGTTTTAACTTTCGTCACTCGGCATAAAGCCACT  439

seq1  GGAATCCATCCCAGTTGCAGCATGTGTAAATAGGTTCTATCACTCTTGTA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCCATCCCAGTTGCAGCATGTGTAAATAGGTTCTATCACTCTTGTA  489

seq1  TCTGTCAATTGCTATTGTAATCCCACAAAACCCCTCTGAACTGGAAAGTT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCAATTGCTATTGTAATCCCACAAAACCCCTCTGAACTGGAAAGTT  539

seq1  TTGTTATGGTGACCATGTCTCTACTTTCTTACAGACTTAGATAATGTCAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATGGTGACCATGTCTCTACTTTCTTACAGACTTAGATAATGTCAC  589

seq1  TGAAACCTGAATCATCTAAGTATATAATCAGGACTTATCCATTGTACAAG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACCTGAATCATCTAAGTATATAATCAGGACTTATCCATTGTACAAG  639

seq1  CAGAGCCAGCAGGGCACAGGTATCTCTCATTCCTTCTCAGCTTAACCATG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGCCAGCAGGGCACAGGTATCTCTCATTCCTTCTCAGCTTAACCATG  689

seq1  GTTCTATAAGGCATCTCAGTAATGAATTTATCTGCTATGACTCTTCCTGA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATAAGGCATCTCAGTAATGAATTTATCTGCTATGACTCTTCCTGA  739

seq1  AAGTATTTGTTGGAGTGTGATGCTAACTTCCAAGCACATTGGTTTCCATG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTATTTGTTGGAGTGTGATGCTAACTTCCAAGCACATTGGTTTCCATG  789

seq1  TCTCATGCTTTATGCAAATATTGAAAAACTTCCCATTTCTACAGTACAAC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATGCTTTATGCAAATATTGAAAAACTTCCCATTTCTACAGTACAAC  839

seq1  TTTGACACTGTATCTCCTCTCACCTTTTCTCAGGAATGGTATATTGGAGA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACACTGTATCTCCTCTCACCTTTTCTCAGGAATGGTATATTGGAGA  889

seq1  CGGAGTTATCTCCTGGACTTCTCATTGTTATACTGTTGGACATTCTATTC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAGTTATCTCCTGGACTTCTCATTGTTATACTGTTGGACATTCTATTC  939

seq1  TCTTTCAGGACTGGAAAGGAACAGTTTTGGAAAGTACAATCAAGTTGTTC  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCAGGACTGGAAAGGAACAGTTTTGGAAAGTACAATCAAGTTGTTC  989

seq1  TGGACTCAAATGCTTGTGAAGAAATCGACACACCTTTTGCATGCTGCCTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTCAAATGCTTGTGAAGAAATCGACACACCTTTTGCATGCTGCCTC  1039

seq1  TGAGGTCTTGGGCGGTTGGAAAAGATGTTATGAGCAGAGAATTGATACAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTCTTGGGCGGTTGGAAAAGATGTTATGAGCAGAGAATTGATACAA  1089

seq1  GCATTGGCAAGTCACAGGTGATTGAATTC  1125
      |||||||||||||||||||||||||||||
seq2  GCATTGGCAAGTCACAGGTGATTGAATTC  1118

seq1: chr17_42053989_42054540
seq2: B6Ng01-080K24.g_555_1107 (reverse)

seq1  TGAAAATG-AAGCCACAACGTACCCAAA-CCTATGGGACACAATGAAAGC  48
      |||||||| ||||  ||  || |||||| |||||||||||||  ||||||
seq2  TGAAAATGAAAGCGGCACAGTCCCCAAACCCTATGGGACACATGGAAAGC  50

seq1  ATTTCTAAGAGGGAAACTCATAGCTCTGAGTGCCTCCAAGAAGAAACGGG  98
      ||||||||| |||||||||||||||||||| | ||||| |||||||||||
seq2  ATTTCTAAGGGGGAAACTCATAGCTCTGAGGGGCTCCAGGAAGAAACGGG  100

seq1  AGACAGCACATACTAGCAGCTTGACAACACATCTAAAAGCTCTAGAAAAA  148
      ||| ||||||||||||||||||||||| |||||||||||||||  |||||
seq2  AGAGAGCACATACTAGCAGCTTGACAATACATCTAAAAGCTCTGAAAAAA  150

seq1  AAGGAAGCAAATTCACCCAAGAGGAGTAGACGGCAGGAAATAATCAAACT  198
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAGC-AATTCACCCAAGAGGAGTAGACGGCAGGAAATAATCAAACT  199

seq1  CAGGGGTGAAATCAACCAAGTGGAAACAAGAAGAACTATTCAAAGAATTA  248
      ||||||||||||||||||||||||||||||||||||||||||| |||| |
seq2  CAGGGGTGAAATCAACCAAGTGGAAACAAGAAGAACTATTCAAGGAATAA  249

seq1  ACCAAACGAGGAGTTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCC  298
      |  ||||||| || ||||||||||||||||||||||||||||||||||||
seq2  AGGAAACGAGAAGGTGGTTCTTTGAGAAAATCAACAAGATAGATAAACCC  299

seq1  TTAGCTAGACTCACTAAAGGGCACAGGGACAAAATCCTAATTAACAAAAT  348
      ||||||||| |||||| ||||||| ||||||  |||||||||||||||||
seq2  TTAGCTAGAGTCACTAGAGGGCACGGGGACAGCATCCTAATTAACAAAAT  349

seq1  CAGAAATGAAAAGGGAGACATAACAACAGATCCTGAAGAAATCCAAAACA  398
      ||||||||||||||||||||||||| || |||||||||||||||||||||
seq2  CAGAAATGAAAAGGGAGACATAACATCATATCCTGAAGAAATCCAAAACA  399

seq1  CCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAACTGGAAAACCTG  448
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCATCAGATCCTTCTACAAAAGGCTATACTCAACAAAATTGGAAAACCTG  449

seq1  GACGAAATGGACAAATTTCTGGACAGATACCAGGTACCAAAGTTGAATCA  498
      || ||||||||||| ||||| ||| ||||||||||| ||||||| | |||
seq2  GATGAAATGGACAAGTTTCTAGACTGATACCAGGTAGCAAAGTTAAGTCA  499

seq1  GGATCAAGTTGACCATCTAAACAGTCCCATATCACCTAAAGAAATAGAAG  548
      |||||||||| || ||||||||||||||||||| | ||| ||||||||||
seq2  GGATCAAGTTAACGATCTAAACAGTCCCATATCCCTTAAGGAAATAGAAG  549

seq1  CAGT  552
      ||||
seq2  CAGT  553