BAC Information

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BAC

Clone NameB6Ng01-083B10
Chromosome17 (Build37)
Map Location 74,422,991 - 74,594,690
singlet/doubletdoublet
Overlap genenone
Upstream geneLycat, LOC668709, Capn13, LOC100043666, Galnt14, Ehd3, LOC240160, Xdh, Srd5a2
Downstream geneMemo1, EG668716, 2810410M20Rik, LOC668773, LOC668775, Spast, Slc30a6, Nlrc4, LOC100043883, LOC624159, Yipf4, Birc6, Ttc27, LOC100043672, Ltbp1, EG621988
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083B10.bB6Ng01-083B10.g
ACCDH897450DH897451
length1,1071,118
definitionDH897450|Mus musculus domesticus DNA, BAC clone: B6Ng01-083B10, 5' end.DH897451|Mus musculus domesticus DNA, BAC clone: B6Ng01-083B10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,422,991 - 74,423,698)(74,593,547 - 74,594,690)
sequence
gaattctgacatagctaaagactcagtgttccaacagtcctagatcgtcc
ttgagcaagaccttggacttggaattcagttctgcccctggtattacact
atctctttgagtaaaagttaggtcactgcccttcacaggaatctaccatc
accaaggaagaaagaagtttctgactgtaggagaaaccagaatagatact
tagaactatagctgagttacacccatatacagggatttacaatggtttag
gaagtagatcaggctgtggttttagagtattgcattatttatgagatggt
tagctagaacggaactccctagttagcaccatgacttgggtgtgaaagcc
cttgccctaggagtgaaaagttctcacacctggcttctaagactatagct
gaccttagataggactgactctgtctcagttattttattgcccagttcct
gccagtctttgtgttttcatttctctgttctgtgtaagagtcattaagca
tccggttacctcatttgtaccttgcaggtatgtcatccaacttccttatt
gtcttctgcataaaaagtctgatgctcgatttgaaaaatgacattcagat
tcctcgacctctcctgtgtgcgtctgtttgtcactcatcctacgctttgt
ccacccgcgactagagacccgttccacgcagacaaaggggctcagagggt
ctgaagcatctgaaaaaaaaaaaacagaattccaaatgtcacacagtcgc
agaaactatctgcagctggcaaaatcactatgctaccttaggcaaatcag
agtcagctgctgtaaaccatttgaaacagctccatattccatacctggga
ttcaaatgaaaacatattcttataacatttctatgtttttaaaaaaattc
aaattgtcactataatcaacctttgaaacttcagacataaagagagtgga
gaaatggtgtgtgctctatgtgactgtgtttagattctgaaatgtagtat
tttatgtgctattctttggctctcgtctcttatgtattttttgagtgatc
agaaactatatctcatgctcgttaactccatgtgatctctgaaaacaata
gctgctc
gaattctttttgagatttttttatttgaaatttatttgaatatgggccaa
aatagacattcagttgttgctcgttcaattttagtgaattgaaacttgaa
agatggagaagaaaaaacaatataataaagtgttttccatgatctaggtt
ggtataaaccttttaattggaagccttttccaatttttgagtttaactat
tgaaatcaagcttcgaactaaaccgtgagggtagaactgatattttaaag
tctgtggaattgcagatggcgttaagtgatgttactgtcctgggtaccta
gagcctttagttcatgacacgctgcttgctgtgctctgaagcactgtccc
atggtatgttccttatttcatggtgctcgggcgcattggaagttaattac
agtggctttggctacgtgcccggttccccaggtgtgtgtgcagtggaagg
acactgcagtagtgggagtccacttcagctttgcaggggagctgctttgg
tttcctgggaaattgctattgatcatcccttcccacaacatagctaggac
aggagtctggttctggttctttagttctgtttgagtgctataccgtagtc
catattttgtttttagcagtggctatttgttgtaagctattgtacttaga
aagtaaggagttttgcagatacgatgaaataatttatagaaattcctcaa
cttataaaagtagatttatttttgtgggctcaaataactacacatattta
tattctcttattagggaattactttacaatttttgaattctcttctagtg
cttacataacaacagtaccagttttaaaaataatttatttttatttcatg
tgcattggtgttctgcttgcatgcatgtctgtgtgaggcgtgaggtcccc
tataactggagttacagacagtgtgagccgccatgtggggtgctgggaat
tgaacccagggctctggaagagcagcaagggctcttaactgctgcgtcat
ctctcagccaacataccactttatgtataagatgatgacgaattttgtgt
atgagtctagtggttttgatgcgatgctaactctcagcatctagtctaca
aagtcttccagtgcctgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_74422991_74423698
seq2: B6Ng01-083B10.b_463_1152

seq1  ACTCTGTCTCAGTTATTTTATTGCCCAGTTCCTGCCAGTCTTTGTGTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGTCTCAGTTATTTTATTGCCCAGTTCCTGCCAGTCTTTGTGTTTT  50

seq1  CATTTCTCTGTTCTGTGTAAGAGTCATTAAGCATCCGGTTACCTCATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTCTGTTCTGTGTAAGAGTCATTAAGCATCCGGTTACCTCATTTG  100

seq1  TACCTTGCAGGTATGTCATCCAACTTCCTTATTGTCTTCTGCATAAAAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTGCAGGTATGTCATCCAACTTCCTTATTGTCTTCTGCATAAAAAG  150

seq1  TCTGATGCTCGATTTGAAAAATGACATTCAGATTCCTCGACCTCTCCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATGCTCGATTTGAAAAATGACATTCAGATTCCTCGACCTCTCCTGT  200

seq1  GTGCGTCTGTTTGTCACTCATCCTACGCTTTGTCCACCCGCGACTAGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCGTCTGTTTGTCACTCATCCTACGCTTTGTCCACCCGCGACTAGAGA  250

seq1  CCCGTTCCACGCAGACAAAGGGGCTCAGAGGGTCTGAAGCATCTGAAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTTCCACGCAGACAAAGGGGCTCAGAGGGTCTGAAGCATCTGAAAAA  300

seq1  AAAAAAACAGAATTCCAAATGTCACACAGTCGCAGAAACTATCTGCAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAACAGAATTCCAAATGTCACACAGTCGCAGAAACTATCTGCAGCT  350

seq1  GGCAAAATCACTATGCTACCTTAGGCAAATCAGAGTCAGCTGCTGTAAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAATCACTATGCTACCTTAGGCAAATCAGAGTCAGCTGCTGTAAAC  400

seq1  CATTTGAAACAGCTCCATATTCCATACCTGGGATTCAAATGAAAACATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGAAACAGCTCCATATTCCATACCTGGGATTCAAATGAAAACATAT  450

seq1  TCTTATAACATTTCTATGTTTTTAAAAAAAATTCAAAATTGTCACTATAA  500
      ||||||||||||||||||||||| |||||||||| |||||||||||||||
seq2  TCTTATAACATTTCTATGTTTTT-AAAAAAATTC-AAATTGTCACTATAA  498

seq1  TCAACCTTTGAAACTTCAGACATAAAGAAGAGGTGGAGAAATGGTGTGTG  550
      ||||||||||||||||||||||||||| ||| ||||||||||||||||||
seq2  TCAACCTTTGAAACTTCAGACATAAAG-AGA-GTGGAGAAATGGTGTGTG  546

seq1  CTCTTATGTGACTGTTGTTTAGATTCTGAAATTGTTAGTATTTTATTGTG  600
      ||| |||||||||| |||||||||||||||||   |||||||||| ||||
seq2  CTC-TATGTGACTG-TGTTTAGATTCTGAAAT--GTAGTATTTTA-TGTG  591

seq1  CTTATTTCTTTTGGCTCTCGTCCTCTTATGTATTTTTTGAGTGGATCAGA  650
      | ||||   |||||||||||| |||||||||||||||||||| |||||||
seq2  C-TATT--CTTTGGCTCTCGT-CTCTTATGTATTTTTTGAGT-GATCAGA  636

seq1  CACTATAATCTCATGCTCGTTAACTCCATTGTGATCTCTGAAAAACAATA  700
       ||||| ||||||||||||||||||||| ||||||||||| |||||||||
seq2  AACTAT-ATCTCATGCTCGTTAACTCCA-TGTGATCTCTG-AAAACAATA  683

seq1  GCCTGCTC  708
      | ||||||
seq2  G-CTGCTC  690

seq1: chr17_74593547_74594690
seq2: B6Ng01-083B10.g_69_1186 (reverse)

seq1  GCAGGCACTTGCAGAACACTTTGTTAAGGACTAGGATGGCTGAGAGTTAG  50
      |||||||||    ||| |||||||    ||||| ||| ||||||||||| 
seq2  GCAGGCACT---GGAAGACTTTGT---AGACTA-GAT-GCTGAGAGTTA-  41

seq1  GCATCTGCCATCAAAACTCACTAAGACTCATACACAAAATTTCTGTCATC  100
      |||||   ||||||||| |||| ||||||||||||||||||   ||||||
seq2  GCATC--GCATCAAAAC-CACT-AGACTCATACACAAAATT--CGTCATC  85

seq1  ATCCTATATTACATAAAAGTGGTATTGTTGGGCTGGAGAGATGACGCAGC  150
      ||| ||   ||||| ||||||||| |||| |||| |||||||||||||||
seq2  ATCTTA---TACAT-AAAGTGGTA-TGTT-GGCT-GAGAGATGACGCAGC  128

seq1  AGTTAAGAGCCCTGGCTGCTCTTCCAGAGGCCCTGGGTTCAATTCCCAGC  200
      ||||||||||||| |||||||||||||| |||||||||||||||||||||
seq2  AGTTAAGAGCCCTTGCTGCTCTTCCAGA-GCCCTGGGTTCAATTCCCAGC  177

seq1  A-CCCACATGGCGGCTCACACCTGTCTGTAACTCCAGTTATAGGGGACCT  249
      | |||||||||||||||||| |||||||||||||||||||||||||||||
seq2  ACCCCACATGGCGGCTCACA-CTGTCTGTAACTCCAGTTATAGGGGACCT  226

seq1  CACGCCCTCACACAGACATGCATGCAAGCAGAACACCAATGCACATGAAA  299
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CACG-CCTCACACAGACATGCATGCAAGCAGAACACCAATGCACATGAAA  275

seq1  TAAAAATAAATTATTTTTTAAAACTGGTACTGTTGTTATGTAAGCACTAG  349
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAAATTA-TTTTTAAAACTGGTACTGTTGTTATGTAAGCACTAG  324

seq1  AAGAGAATTCAAAAATTGTAAAGTAATTCCCTAATAAGAGAATATAAATA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAATTCAAAAATTGTAAAGTAATTCCCTAATAAGAGAATATAAATA  374

seq1  TGTGTAGTTATTTGAGCCCACAAAAATAAATCTACTTTTATAAGTTGAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGTTATTTGAGCCCACAAAAATAAATCTACTTTTATAAGTTGAGG  424

seq1  AATTTCTATAAATTATTTTCATCGTATCTGCAAAACTCCTTACTTTCTAA  499
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AATTTCTATAAATTA-TTTCATCGTATCTGCAAAACTCCTTACTTTCTAA  473

seq1  GTACAATAGCTTACAACAAATAGCCACTGCTAAAAACAAAATATGGACTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAATAGCTTACAACAAATAGCCACTGCTAAAAACAAAATATGGACTA  523

seq1  CGGTATAGCACTCAAACAGAACTAAAGAACCAGAACCAGACTCCTGTCCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTATAGCACTCAAACAGAACTAAAGAACCAGAACCAGACTCCTGTCCT  573

seq1  AGCTATGTTGTGGGAAGGGATGATCAATAGCAATTTCCCAGGAAACCAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATGTTGTGGGAAGGGATGATCAATAGCAATTTCCCAGGAAACCAAA  623

seq1  GCAGCTCCCCTGCAAAGCTGAAGTGGACTCCCACTACTGCAGTGTCCTTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTCCCCTGCAAAGCTGAAGTGGACTCCCACTACTGCAGTGTCCTTC  673

seq1  CACTGCACACACACCTGGGGAACCGGGCACGTAGCCAAAGCCACTGTAAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGCACACACACCTGGGGAACCGGGCACGTAGCCAAAGCCACTGTAAT  723

seq1  TAACTTCCAATGCGCCCGAGCACCATGAAATAAGGAACATACCATGGGAC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTCCAATGCGCCCGAGCACCATGAAATAAGGAACATACCATGGGAC  773

seq1  AGTGCTTCAGAGCACAGCAAGCAGCGTGTCATGAACTAAAGGCTCTAGGT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTCAGAGCACAGCAAGCAGCGTGTCATGAACTAAAGGCTCTAGGT  823

seq1  ACCCAGGACAGTAACATCACTTAACGCCATCTGCAATTCCACAGACTTTA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGACAGTAACATCACTTAACGCCATCTGCAATTCCACAGACTTTA  873

seq1  AAATATCAGTTCTACCCTCACGGTTTAGTTCGAAGCTTGATTTCAATAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCAGTTCTACCCTCACGGTTTAGTTCGAAGCTTGATTTCAATAGT  923

seq1  TAAACTCAAAAATTGGAAAAGGCTTCCAATTAAAAGGTTTATACCAACCT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTCAAAAATTGGAAAAGGCTTCCAATTAAAAGGTTTATACCAACCT  973

seq1  AGATCATGGAAAACACTTTATTATATTGTTTTTTCTTCTCCATCTTTCAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCATGGAAAACACTTTATTATATTGTTTTTTCTTCTCCATCTTTCAA  1023

seq1  GTTTCAATTCACTAAAATTGAACGAGCAACAACTGAATGTCTATTTTGGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAATTCACTAAAATTGAACGAGCAACAACTGAATGTCTATTTTGGC  1073

seq1  CCATATTCAAATAAATTTCAAATAAAAAAATCTCAAAAAGAATTC  1144
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTCAAATAAATTTCAAATAAAAAAATCTCAAAAAGAATTC  1118