BAC Information

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BAC

Clone NameB6Ng01-084D20
Chromosome17 (Build37)
Map Location 69,602,966 - 69,743,255
singlet/doubletdoublet
Overlap geneEpb4.1l3, 2410021H03Rik, Zfp161
Upstream geneD930040M24Rik, EG622645
Downstream geneC030034I22Rik, A930029G22Rik, A330050F15Rik, LOC100043623, LOC668720, LOC673535, LOC100043630, LOC623112
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084D20.bB6Ng01-084D20.g
ACCDH898259DH898260
length1,1281,107
definitionDH898259|Mus musculus domesticus DNA, BAC clone: B6Ng01-084D20, 5' end.DH898260|Mus musculus domesticus DNA, BAC clone: B6Ng01-084D20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(69,602,966 - 69,604,096)(69,742,143 - 69,743,255)
sequence
gaattccaagcactgtgggacacgggggattatgtccaaatgccttcgag
aatttgtcgtaggtttccccagcaaatattaaaaacaggttctcttcttt
gttaggctattctagtttttgttctttttaaaaacaactgcatacattaa
ctgaaaagacttttaaactcatattttaatgtagaatcaagatgcttcaa
actgtggtgaatacctctcctcccttgtgtcttgtcgttgtgtcctcctg
taaatatgggtgctccctcatgtcagtaacttcaggataacatgctatac
ggtataaggagtggattctgaatgtaaattatttatgtcttttatccatt
agagaaactaataaaagaataagaatggttaatactccttaagccacaat
ctacccaatgaacttgcatcttccttggtgatctttgagctgtcaaggtc
tgctgtttttcccttaaagaaaaaattaataaataactataattactcat
aggtgtgattaatatatgaaaggctctcagacctcaaagatccctgccca
tttgtgtctctgaacattttctggcatatcacagggatctctctcaagct
tacgtctctccactgaagtttcttggtggaaaaatcattcctcaaggcga
aaatgtaaggctggagagatggctctgcagttaagtgcactcgttgctct
agtagaggacccagattccattaccagcacccacacagtgactcacaaac
atctgtaactccatttccagaggataagctcccctcttccagacgtctcc
tcaggcaccaagcatgcaaatggtgtaatgcatacatgcagaccaaacat
gcatacatataaagtaagtctttagaaagtttaaaaattaaaatatatag
caagggtagaatatcatgtaaatttaaaataataattatctataatggca
cagtaaggaagcattccacatgattacacctgagattgtgagtttctaaa
gagacactttgaagatatatgatcacacgttaggcacatacattcctttg
aattcagtgaaaacttaacttcaaggtcctcccggaacaggctgcgccat
gtacacgtgaactgctcttttgctttgg
gaattcctggatttaggagaatggtgctcatatgctctgttcaattacgt
gtcaatacgctaacagtgaaccgtgatcaggctcaccaaatgctcgcctt
ctgtctttgacattctgtcaatgatacattatggcaattatatttaattc
caaggttacatttctttatattttttgaaataagaatgatataaagtgag
ccaggcgtggtggcgcacgcctttaatctcagcacttgggaggtagagga
aggcggatttctgagttcgaggccagcctggtctaagagtgtgttccaag
acagccaaggctatacagagaaaccctgtttcaaaaaaccaaaaaaaaaa
aaaaaaaaaaaaaaaccaaaaacccaaccaaccaaccaaccaaacaaacc
aaaacaaaacaaaagaatgatataaattgggcagggaatagggaatcaaa
catatatatatatttgttggtgtttcaagacagggtttctctgtgtaacc
ctggctggcctcgaacttgctctgtagagcaggctggtcttgaactcagg
gatcctcctgcctctgcctccctcattctgaggctaaaggcatgttgcca
tcctgcccagctgcaaattggagttacagtcagttgtgagctgctgggga
ttaaacctgtgacctccagaaaagcagccagtgctctgaacactgagcca
tctctctctggtctcaaaataaatttcgaccaaagcatttaaagaagatc
attcgagcagcagagctttgtgagggagagaagtagaacgcgaatctaag
aatctaagacttatactaaagagcgggggaagggccagcaggatctctaa
gcacagctgaccaacctcacagctgtttttggccccaaactgcatagact
ttggtattgtgggactttcctgggtcacttgtgagaaagctagttcatgg
catttggccagtgggcttccatgtttggggacatggtcctagaattacgc
aagacaggttagttcaagtttggatcctgacccacctcctagagacattc
cttgattttgtacacctaatgtgtgcattggtggtggatgcctagcatca
cgagtcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_69602966_69604096
seq2: B6Ng01-084D20.b_46_1173

seq1  GAATTCCAAGCACTGTGGGACACGGGGGATTATGTCCAAATGCCTTCGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCACTGTGGGACACGGGGGATTATGTCCAAATGCCTTCGAG  50

seq1  AATTTGTCGTAGGTTTCCCCAGCAAATATTAAAAACAGGTTCTCTTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTCGTAGGTTTCCCCAGCAAATATTAAAAACAGGTTCTCTTCTTT  100

seq1  GTTAGGCTATTCTAGTTTTTGTTCTTTTTAAAAACAACTGCATACATTAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGGCTATTCTAGTTTTTGTTCTTTTTAAAAACAACTGCATACATTAA  150

seq1  CTGAAAAGACTTTTAAACTCATATTTTAATGTAGAATCAAGATGCTTCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAGACTTTTAAACTCATATTTTAATGTAGAATCAAGATGCTTCAA  200

seq1  ACTGTGGTGAATACCTCTCCTCCCTTGTGTCTTGTCGTTGTGTCCTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGTGAATACCTCTCCTCCCTTGTGTCTTGTCGTTGTGTCCTCCTG  250

seq1  TAAATATGGGTGCTCCCTCATGTCAGTAACTTCAGGATAACATGCTATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATGGGTGCTCCCTCATGTCAGTAACTTCAGGATAACATGCTATAC  300

seq1  GGTATAAGGAGTGGATTCTGAATGTAAATTATTTATGTCTTTTATCCATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAAGGAGTGGATTCTGAATGTAAATTATTTATGTCTTTTATCCATT  350

seq1  AGAGAAACTAATAAAAGAATAAGAATGGTTAATACTCCTTAAGCCACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAACTAATAAAAGAATAAGAATGGTTAATACTCCTTAAGCCACAAT  400

seq1  CTACCCAATGAACTTGCATCTTCCTTGGTGATCTTTGAGCTGTCAAGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACCCAATGAACTTGCATCTTCCTTGGTGATCTTTGAGCTGTCAAGGTC  450

seq1  TGCTGTTTTTCCCTTAAAGAAAAAATTAATAAATAACTATAATTACTCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTTTTTCCCTTAAAGAAAAAATTAATAAATAACTATAATTACTCAT  500

seq1  AGGTGTGATTAATATATGAAAGGCTCTCAGACCTCAAAGATCCCTGCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGTGATTAATATATGAAAGGCTCTCAGACCTCAAAGATCCCTGCCCA  550

seq1  TTTGTGTCTCTGAACATTTTCTGGCATATCACAGGGATCTCTCTCAAGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTCTCTGAACATTTTCTGGCATATCACAGGGATCTCTCTCAAGCT  600

seq1  TACGTCTCTCCACTGAAGTTTCTTGGTGGAAAAATCATTCCTCAAGGCGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGTCTCTCCACTGAAGTTTCTTGGTGGAAAAATCATTCCTCAAGGCGA  650

seq1  AAATGTAAGGCTGGAGAGATGGCTCTGCAGTTAAGTGCACTCGTTGCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTAAGGCTGGAGAGATGGCTCTGCAGTTAAGTGCACTCGTTGCTCT  700

seq1  AGTAGAGGACCCAGATTCCATTACCAGCACCCACACAGTGACTCACAAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAGGACCCAGATTCCATTACCAGCACCCACACAGTGACTCACAAAC  750

seq1  ATCTGTAACTCCATTTCCAGAGGATAAGCTCCCCTCTTCCAGACGTCTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTAACTCCATTTCCAGAGGATAAGCTCCCCTCTTCCAGACGTCTCC  800

seq1  TCAGGCACCAAGCATGCAAATGGTGTAATGCATACATGCAGACCAAACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCACCAAGCATGCAAATGGTGTAATGCATACATGCAGACCAAACAT  850

seq1  GCATACATATAAAGTAAGTCTTTAGAAAGTTTAAAAATTAAAATATATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACATATAAAGTAAGTCTTTAGAAAGTTTAAAAATTAAAATATATAG  900

seq1  CAAGGGTAGAATATCATGTAAATTTAAAATAATAATTATCTATAATGGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGTAGAATATCATGTAAATTTAAAATAATAATTATCTATAATGGCA  950

seq1  CAGTAAGGAAGCATTCCACATGATTACACCTGAGATTGTGGAGTTTCTAA  1000
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAGTAAGGAAGCATTCCACATGATTACACCTGAGATTGT-GAGTTTCTAA  999

seq1  AGAGACACTTTGAAAGATTATATGATCAACACGTAAGGCACATACATTCC  1050
      |||||||||||| |||| ||||||||| |||||| |||||||||||||||
seq2  AGAGACACTTTG-AAGA-TATATGATC-ACACGTTAGGCACATACATTCC  1046

seq1  TTTGAATTCAGTGAAAACTTAACTTCAGGGTCCTCCCGGACAGGGCTGCG  1100
      ||||||||||||||||||||||||||| ||||||||||||   |||||||
seq2  TTTGAATTCAGTGAAAACTTAACTTCAAGGTCCTCCCGGAACAGGCTGCG  1096

seq1  -CATGTACACGTGACCTGCTCTTTTGCTTTGG  1131
       ||||||||||||| |||||||||||||||||
seq2  CCATGTACACGTGAACTGCTCTTTTGCTTTGG  1128

seq1: chr17_69742143_69743255
seq2: B6Ng01-084D20.g_68_1174 (reverse)

seq1  GGACTCCGTGATGCTATAGCATTCCCACACACACATGCACACAATAAGTG  50
      ||||| ||||||||||  ||||  |||| |||  ||||||||| || |||
seq2  GGACT-CGTGATGCTA-GGCAT--CCAC-CACCAATGCACACATTAGGTG  45

seq1  TAACAAAATTCAAGGAATGTCTCTTAGGCAGTGGGTCAGATTCCAAAC-T  99
      | |||||| |||||||||||||| ||||  |||||||||  ||||||| |
seq2  T-ACAAAA-TCAAGGAATGTCTC-TAGGAGGTGGGTCAGGATCCAAACTT  92

seq1  GACCTTACCTGTCTTGCGTAATTCTAGAACC-TGTCCCCAAACATGGAAG  148
      || || ||||||||||||||||||||| ||| ||||||||||||||||||
seq2  GAACTAACCTGTCTTGCGTAATTCTAGGACCATGTCCCCAAACATGGAAG  142

seq1  CCCACTGGCCAAATGCCATGAACTAGCTTTCTTCACAAGTGACCCAGGAA  198
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCCACTGGCCAAATGCCATGAACTAGCTTTC-TCACAAGTGACCCAGGAA  191

seq1  AGTCCCCACAATACCAAAGTCTATGCAGTTTGGGGCCAAAAACAGCTGTG  248
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGT-CCCACAATACCAAAGTCTATGCAGTTTGGGGCCAAAAACAGCTGTG  240

seq1  AGGTTGGTCAGCTGTGCTTAGAGATCCTGCTGG-CCTTCCCCCGCTCTTT  297
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  AGGTTGGTCAGCTGTGCTTAGAGATCCTGCTGGCCCTTCCCCCGCTCTTT  290

seq1  AGTATAAGTCTTAGATTCTTAGATTCGCGTTCTACTTCTCTCCCTCAC-A  346
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGTATAAGTCTTAGATTCTTAGATTCGCGTTCTACTTCTCTCCCTCACAA  340

seq1  AGCTCTGCTGCTCGAATGATCTTCTTTAAATGCTTTGGTCGAAATTTATT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGCTGCTCGAATGATCTTCTTTAAATGCTTTGGTCGAAATTTATT  390

seq1  TTGAGACCAGAGAGAGATGGCTCAGTGTTCAGAGCACTGGCTGCTTTTCT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGACCAGAGAGAGATGGCTCAGTGTTCAGAGCACTGGCTGCTTTTCT  440

seq1  GGAGGTCACAGGTTTAATCCCCAGCAGCTCACAACTGACTGTAACTCCAA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTCACAGGTTTAATCCCCAGCAGCTCACAACTGACTGTAACTCCAA  490

seq1  TTTGCAGCTGGGCAGGATGGCAACATGCCTTTAGCCTCAGAATGAGGGAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAGCTGGGCAGGATGGCAACATGCCTTTAGCCTCAGAATGAGGGAG  540

seq1  GCAGAGGCAGGAGGATCCCTGAGTTCAAGACCAGCCTGCTCTACAGAGCA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCAGGAGGATCCCTGAGTTCAAGACCAGCCTGCTCTACAGAGCA  590

seq1  AGTTCGAGGCCAGCCAGGGTTACACAGAGAAACCCTGTCTTGAAACACCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCGAGGCCAGCCAGGGTTACACAGAGAAACCCTGTCTTGAAACACCA  640

seq1  ACAAATATATATATATGTTTGATTCCCTATTCCCTGCCCAATTTATATCA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATATATATATATGTTTGATTCCCTATTCCCTGCCCAATTTATATCA  690

seq1  TTCTTTTGTTTTGTTTTGGTTTGTTTGGTTGGTTGGTTGGTTGGGTTTTT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTGTTTTGTTTTGGTTTGTTTGGTTGGTTGGTTGGTTGGGTTTTT  740

seq1  GGTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTTGAAACAGGGTTTCTC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTTTTTTTTTTTTTTTTTTTTTTGGTTTTTTGAAACAGGGTTTCTC  790

seq1  TGTATAGCCTTGGCTGTCTTGGAACACACTCTTAGACCAGGCTGGCCTCG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAGCCTTGGCTGTCTTGGAACACACTCTTAGACCAGGCTGGCCTCG  840

seq1  AACTCAGAAATCCGCCTTCCTCTACCTCCCAAGTGCTGAGATTAAAGGCG  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCAGAAATCCGCCTTCCTCTACCTCCCAAGTGCTGAGATTAAAGGCG  890

seq1  TGCGCCACCACGCCTGGCTCACTTTATATCATTCTTATTTCAAAAAATAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGCCACCACGCCTGGCTCACTTTATATCATTCTTATTTCAAAAAATAT  940

seq1  AAAGAAATGTAACCTTGGAATTAAATATAATTGCCATAATGTATCATTGA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAATGTAACCTTGGAATTAAATATAATTGCCATAATGTATCATTGA  990

seq1  CAGAATGTCAAAGACAGAAGGCGAGCATTTGGTGAGCCTGATCACGGTTC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGTCAAAGACAGAAGGCGAGCATTTGGTGAGCCTGATCACGGTTC  1040

seq1  ACTGTTAGCGTATTGACACGTAATTGAACAGAGCATATGAGCACCATTCT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTAGCGTATTGACACGTAATTGAACAGAGCATATGAGCACCATTCT  1090

seq1  CCTAAATCCAGGAATTC  1113
      |||||||||||||||||
seq2  CCTAAATCCAGGAATTC  1107