BAC Information

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BAC

Clone NameB6Ng01-088M14
Chromosome17 (Build37)
Map Location 94,994,987 - 94,996,242
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneLOC668885, LOC668886, Mettl4, 2700099C18Rik, LOC100043754, LOC668888, LOC100038868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088M14.bB6Ng01-088M14.g
ACCDH901546DH901547
length1,1421,229
definitionDH901546|Mus musculus domesticus DNA, BAC clone: B6Ng01-088M14, 5' end.DH901547|Mus musculus domesticus DNA, BAC clone: B6Ng01-088M14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcatctgaaaaaatg
ctcagcatccttaatcatcagagaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatagctaagatcaaaaattcaggttatagc
agatgctggcgaggatgtggagaaagaggaacactccttcattgttggtg
ggattacaagcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactactggaggatcccacaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctctactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatg
gagaatgaatttatgaaattcctaggcaaatggttggacctggagggcat
catcctgagtgagataacacaatcacaaaagaactcaaatgatatgtact
cactgataagtggatattagcccataaacttagtatacccgagatataag
agacaatttgtaaaacacatgaaactgaagaagaacgaagaccaaagtgt
ggacactttgccccttcttagaattggaaacaatcacccatgaaaggagt
tacagagacaaagtttggagctgagacaaaaggatggaccatctagagac
tgccatatctagggatccatcccaaaattagcctccaaacgatgacacaa
ttgcatacaccagcaagcctttgctgaaaggaccctgatatagctgtcaa
gagactaggccggggcctagcaaacacataagcggatgctcacagtcagc
tattggatggatcacagggcccccaatggagagctagagaaagtaaccaa
ggaactaaagagatctgtaccctgtagtgcacacattatgactaaccagt
accctgagctcttgacttagctgcatatgtatcaaaagatgtctagtagc
catcactgaagagaggcccatgaccacaaactttatatgctcagtatggg
gaccacaggcattaagtgggatgggtgggttaggggagtggc
gaattcatggtaaaaaagagaaaaatgtacagaacaaactgtgcttaatt
attaagcaatgtaatgtgttcctcagttgacagcagatgtggatgatggc
ataataaacttggtaattatttgccaatgctgaatgtaaaaaccagagtc
ctaatcaaactttaactagccactaaatatataacagcccagaaaacata
caggaagtataaagacttctatatccagtctaagtggtatcatgatctgt
tagatactggagaagctttgaactaagcccatgttggtgataagataggc
ttagagaccagggagtattgaataggattccaagcttagatcaaaagctt
gataattgcctctagaagttgtattcatttaaagcacttttgataacaag
gtaaacatgccactttaagtagttaacagagtaaaccaagtatagtgtgt
atgggattatctctaagtttacaccccttaagaggaaatgtttaggacag
gaaatgtctgtggccttgtagactgtttatagctagagccttagtaccat
gggaactctccatggcaaggggacaaaatggaccttctttgtgttctttg
caccttagaatgtagcagagatttctgcataaggagttcatgtagagttg
tttaggctagctagatacaaactgttccaacagttagggaacaaaggagc
ctgcattttagaatgaagcaaggattcactgtctatcaataggtgaagga
gctttgacaggttctatttccaagacaatcatggtgtgagacagtacagc
acacctggtgcctctcaggaagatggtgccacacagaccttagctgacac
tgtgctattagtcacatcggtggcatatgtttgccagtgtattcagatga
cttgaatgtcaattctagaacctcattgcttattatttgctttatatgat
gctctgggcctgtgaatgtggcttgagtcattctcaatgggtaccttggc
ctactcatggctcttgactgaaagaaccaccctgagagtttctaaataat
tatgtgggctagtagacttgagtgtctggatatttctgaagattctgact
tatgatgctatattaaaaggctgctatctgttcgaagcacttttagctca
ctgtccggagactagtagagcctgcgttacatcatctgtaacatgttctg
aatcacaatccactaggtatcactcaaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_94994987_94996242
seq2: B6Ng01-088M14.g_69_1297 (reverse)

seq1  ATTAGAGTGAAACCTA-TGGATATGTGATCTAAGAACATGTTATCAAGAT  49
      ||| |||||| ||||| ||||| |||||| | |||||||||||   ||| 
seq2  ATTTGAGTGATACCTAGTGGAT-TGTGAT-TCAGAACATGTTA--CAGA-  45

seq1  GTGATGTACAGCAAGGACTCTAACCACTATGTCTCGGGGACTAGTGAGCT  99
       |||||||  |||  | ||||    |||| |||||  |||| ||||||||
seq2  -TGATGTAACGCA--GGCTCT----ACTA-GTCTC-CGGAC-AGTGAGCT  85

seq1  ATAAGTTGCTTCTGAAACAGATAGCAGCCCTTCTAATATAGCATCCAATA  149
      | ||| ||||||   |||||||||||| |||| ||||||||||||  |||
seq2  AAAAG-TGCTTC--GAACAGATAGCAG-CCTTTTAATATAGCATC--ATA  129

seq1  AATGTCAGAATCTTCAGAAATATCAAGAACACTCAATGTCTACCTAGCCC  199
      |  ||||||||||||||||||||| || |||||||| ||||| |||||||
seq2  A--GTCAGAATCTTCAGAAATATCCAG-ACACTCAA-GTCTA-CTAGCCC  174

seq1  ACATAATTAATTTAGAAACTCTCAGGGTGGTTCTTTCAGTCAAGAGCCAT  249
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ACATAATT-ATTTAGAAACTCTCAGGGTGGTTCTTTCAGTCAAGAGCCAT  223

seq1  GAGTAGGCCAAGGTACCCATTGAGAATGACTCAAGCCACATTCACAGGCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAGGCCAAGGTACCCATTGAGAATGACTCAAGCCACATTCACAGGCC  273

seq1  AAGAGCATCATATAAAAGCAAATAATAAGCAATGAGGTTCTAGAATTGAC  349
       |||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CAGAGCATCATAT-AAAGCAAATAATAAGCAATGAGGTTCTAGAATTGAC  322

seq1  ATTCAAGTCATCTGAATACACTGGCAAACATATGCCACCGATGTGACTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGTCATCTGAATACACTGGCAAACATATGCCACCGATGTGACTAA  372

seq1  TAGCACAGTGTCAGCTAAGGTCTGTGTGGCACCATCTTCCTGAGAGGCAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCACAGTGTCAGCTAAGGTCTGTGTGGCACCATCTTCCTGAGAGGCAC  422

seq1  CAGGTGTGCTGTACTGTCTCACACCATGATTGTCTTGGAAATAGAACCTG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTGCTGTACTGTCTCACACCATGATTGTCTTGGAAATAGAACCTG  472

seq1  TCAAAGCTCCTTCACCTATTGATAGACAGTGAATCCTTGCTTCATTCTAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGCTCCTTCACCTATTGATAGACAGTGAATCCTTGCTTCATTCTAA  522

seq1  AATGCAGGCTCCTTTGTTCCCTAACTGTTGGAACAGTTTGTATCTAGCTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAGGCTCCTTTGTTCCCTAACTGTTGGAACAGTTTGTATCTAGCTA  572

seq1  GCCTAAACAACTCTACATGAACTCCTTATGCAGAAATCTCTGCTACATTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAACAACTCTACATGAACTCCTTATGCAGAAATCTCTGCTACATTC  622

seq1  TAAGGTGCAAAGAACACAAAGAAGGTCCATTTTGTCCCCTTGCCATGGAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTGCAAAGAACACAAAGAAGGTCCATTTTGTCCCCTTGCCATGGAG  672

seq1  AGTTCCCATGGTACTAAGGCTCTAGCTATAAACAGTCTACAAGGCCACAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCATGGTACTAAGGCTCTAGCTATAAACAGTCTACAAGGCCACAG  722

seq1  ACATTTCCTGTCCTAAACATTTCCTCTTAAGGGGTGTAAACTTAGAGATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCCTGTCCTAAACATTTCCTCTTAAGGGGTGTAAACTTAGAGATA  772

seq1  ATCCCATACACACTATACTTGGTTTACTCTGTTAACTACTTAAAGTGGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCATACACACTATACTTGGTTTACTCTGTTAACTACTTAAAGTGGCA  822

seq1  TGTTTACCTTGTTATCAAAAGTGCTTTAAATGAATACAACTTCTAGAGGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTACCTTGTTATCAAAAGTGCTTTAAATGAATACAACTTCTAGAGGC  872

seq1  AATTATCAAGCTTTTGATCTAAGCTTGGAATCCTATTCAATACTCCCTGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATCAAGCTTTTGATCTAAGCTTGGAATCCTATTCAATACTCCCTGG  922

seq1  TCTCTAAGCCTATCTTATCACCAACATGGGCTTAGTTCAAAGCTTCTCCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTAAGCCTATCTTATCACCAACATGGGCTTAGTTCAAAGCTTCTCCA  972

seq1  GTATCTAACAGATCATGATACCACTTAGACTGGATATAGAAGTCTTTATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCTAACAGATCATGATACCACTTAGACTGGATATAGAAGTCTTTATA  1022

seq1  CTTCCTGTATGTTTTCTGGGCTGTTATATATTTAGTGGCTAGTTAAAGTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGTATGTTTTCTGGGCTGTTATATATTTAGTGGCTAGTTAAAGTT  1072

seq1  TGATTAGGACTCTGGTTTTTACATTCAGCATTGGCAAATAATTACCAAGT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTAGGACTCTGGTTTTTACATTCAGCATTGGCAAATAATTACCAAGT  1122

seq1  TTATTATGCCATCATCCACATCTGCTGTCAACTGAGGAACACATTACATT  1199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTATGCCATCATCCACATCTGCTGTCAACTGAGGAACACATTACATT  1172

seq1  GCTTAATAATTAAGCACAGTTTGTTCTGTACATTTTTCTCTTTTTTACCA  1249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAATAATTAAGCACAGTTTGTTCTGTACATTTTTCTCTTTTTTACCA  1222

seq1  TGAATTC  1256
      |||||||
seq2  TGAATTC  1229