BAC Information

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BAC

Clone NameB6Ng01-089P12
Chromosome17 (Build37)
Map Location 14,305,805 - 14,472,312
singlet/doubletdoublet
Overlap geneDact2, Smoc2
Upstream geneUnc93a, Smok2a, Smok2b, LOC667359, LOC100041352, LOC667372, LOC667384, Smok4a, Tcte2, Mllt4, LOC100041464, EG635895, EG664821, EG664831, 4930488N24Rik
Downstream geneLOC664856, Thbs2, LOC100041236, Wdr27, LOC664893, 1600012H06Rik, Phf10, LOC100041586, LOC100041574, LOC100041289, LOC100041639, LOC100041621, LOC100041301, 9030025P20Rik, Tcte3, C330048F19, LOC664953
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089P12.bB6Ng01-089P12.g
ACCDH902400DH902401
length1,1211,091
definitionDH902400|Mus musculus domesticus DNA, BAC clone: B6Ng01-089P12, 5' end.DH902401|Mus musculus domesticus DNA, BAC clone: B6Ng01-089P12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,471,181 - 14,472,312)(14,305,805 - 14,306,900)
sequence
gaattcctggctcatttcagatgccagcaaggaggctttgggtgtgggtc
taacactaactatgacccatctcaccatgctgtggagagtgtaacagttc
ctaagcagcgaatacaccaaaacattgtaaggcctgccaccctgtgcacc
acgctctggggacagcacagcaagccccacccctttatcagtttgaccac
actgaatttaatcctggaggcggatcagttgccaacactcctgcccccca
gttgaagtaaccagtgcccagatcaagaacactgcagcctctcgcctctc
agagacacaacacccgaagtcacccattcctctcctctacacagttactc
ctgggagccacaacctatgttgccattgtgtatcctgagcagatgcacca
gcttcagcacagcagctctggggacacgggtgactcctcctgtctttgcc
tccgcaaagcagggattacaatcatatgctgttattgctaactatgtgag
cactgggaactgaactcaggtcttcatgattctgagctgtctctttactg
agtgagccatctctttggatcagtaagtggtttaaatacagtctgtgttc
cctgaatagaaaaccatggatttgctgatttatccttttttttttttttt
ttttttttttggaattacttgtggattctctgtctaaaaggaaatataac
atgagcttcagctttgcaagcctctgctaggaaaacataaaaaccataag
ctattcctattacttgagccatcataaacattccagaaagcataaatttt
caagccaccagttttgtttcatccttggctcacagttccttaagcttttc
acattatccttgtgccaagccattttcaaacttgacaatctgtataatgg
gactctcattccaagttcattggctgggcacgtttcagctagtttgtctt
agaagacaattgctacaaacaaataaaacttgtggaaatccagtacagaa
aactaacatccctgatggcaagccacctgcctgccagtctcattcagact
ttactgaatttcttatcctaatcaagtcccacggggaactctgagcaggt
ctttgcgggtccaacttggaa
gaattcttttacttgtctcttgagttttcagtgatgaaattgagaaaaca
ggttaagcagagaatgaatgagcctctaatgtcctggtttggtgttcatc
ctgacaacccccgccccggtcaccctatgaccctgggcactgctctctgg
gttctgaatggggagtgtctccttggaacgctgaatggatgatcagatca
agtgaatctaaaggtcagaacgagggacagtcctaagtagtgaaggtcac
gggagtgcttggccttgacttagctactgatacacaaacacaagaaggca
atggatggccattattgaccccggctctttaactgaccatgacatcatat
tttcagtaaaaacaaaccaagacttaaccttcattctttatttggcccat
ccatcatgttttttaaagagtacactggattgtcttgaacaccagatgat
atccaaacaggagatacacacaatatctgtgtgcttggtttgagtggaga
tgcagtcttcacaaggcatggagaggtggggcctttctgagatggctggt
gctgagcctatgtcctaatgaatggctgagcctgagaggccttccagacc
ctgcctccacaggagggtccccagaagtgaccatttagaaggcacaggtc
ccctgcagacaccagagctgtgaagacgctaatctttcttccctgcacgc
tatgccgtttcttcactctggtacagcagaaggacgggcagcagaaaccc
agttctccctgcatctacattccattagaatctccgtggaagtgcgtgcg
gtcccggaaatgagcagcctgtaacccatatttggaggtcagccttcacc
ttcccgtgggctcatttacccaaagtgttcagctccctgctgctaccgtt
tacatttttaagcccactcttttctcttctgctgtgctttgccatcccac
tgcagaggagtccctaaccctaacctctcctggcttcagcagtgagcaga
acgactccgtatctcttgttttcttagaactctgattacccctctgggta
atgcatgccagtggggaagggggagctggatctgtacaagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_14471181_14472312
seq2: B6Ng01-089P12.b_50_1170 (reverse)

seq1  TTCCAAGTGTGGACCCCGCAAAGACCCTGCCTCCAGAGTGTCTCCCCGGT  50
      |||||||| |||| |||||||||| |||||   ||||||   ||||||  
seq2  TTCCAAGT-TGGA-CCCGCAAAGA-CCTGC--TCAGAGT---TCCCCGTG  42

seq1  GGAGACCTTGA-TAAGATAAGAATTCCAGTAAAGTCTGGAATGAGACATG  99
      |||   ||||| || |||||||| | ||||||||||| ||||||||| ||
seq2  GGA---CTTGATTAGGATAAGAAATTCAGTAAAGTCT-GAATGAGAC-TG  87

seq1  GCAGGCAGGTGGCTTGCCATCAGGGGATGGTAGTTATCTGATACTTGGAT  149
      |||||||||||||||||||||| |||||| ||||| |||| ||| |||||
seq2  GCAGGCAGGTGGCTTGCCATCA-GGGATGTTAGTTTTCTG-TAC-TGGAT  134

seq1  TT-CACAGATTTTATTTGTTTGTTGCCATTGTCTCCTAAGACAAACTAGC  198
      || ||||  |||||||||||||| || ||||||| |||||||||||||| 
seq2  TTCCACAAGTTTTATTTGTTTGTAGCAATTGTCTTCTAAGACAAACTAG-  183

seq1  CTGGAACGTG-CCAGCC-ATGAACTTGGAATGAGAGTCCCATTATACAGA  246
      ||| |||||| |||||| ||||||||||||||||||||||||||||||||
seq2  CTGAAACGTGCCCAGCCAATGAACTTGGAATGAGAGTCCCATTATACAGA  233

seq1  TTGTCAAGTTTGAAAATGGCTTGGC-CAAGG-TAATGTGAAAGCTTTAAG  294
      ||||||||||||||||||||||||| ||||| ||||||||||   |||||
seq2  TTGTCAAGTTTGAAAATGGCTTGGCACAAGGATAATGTGAAAAGCTTAAG  283

seq1  GAACTGTGAGCCAAGGATGAAACAAAACTTGTTGCTTGAAAATTTATGCT  344
      ||||||||||||||||||||||||||||| || |||||||||||||||||
seq2  GAACTGTGAGCCAAGGATGAAACAAAACTGGTGGCTTGAAAATTTATGCT  333

seq1  CTTCTGGAATGTTTATGATGGCTCAAGTAATAGGAATAGCTTATGG-TTT  393
       ||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  -TTCTGGAATGTTTATGATGGCTCAAGTAATAGGAATAGCTTATGGTTTT  382

seq1  TATGTTTTCCCTAGCAGAGGCTTGC-AAGCTGAAGCTCATGTTATATTTC  442
      |||||||| |||||||||||||||| ||||||||||||||||||||||||
seq2  TATGTTTT-CCTAGCAGAGGCTTGCAAAGCTGAAGCTCATGTTATATTTC  431

seq1  CTTTTAGACAGAGAATCCACAAGTAATTCCAAAAAAAAAAAAAAAAAAAA  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGACAGAGAATCCACAAGTAATTCCAAAAAAAAAAAAAAAAAAAA  481

seq1  AAAAAGGATAAATCAGCAAATCCATGGTTTTCTATTCAGGGAACACAGAC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGGATAAATCAGCAAATCCATGGTTTTCTATTCAGGGAACACAGAC  531

seq1  TGTATTTAAACCACTTACTGATCCAAAGAGATGGCTCACTCAGTAAAGAG  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTAAACCACTTACTGATCCAAAGAGATGGCTCACTCAGTAAAGAG  581

seq1  ACAGCTCAGAATCATGAAGACCTGAGTTCAGTTCCCAGTGCTCACATAGT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCAGAATCATGAAGACCTGAGTTCAGTTCCCAGTGCTCACATAGT  631

seq1  TAGCAATAACAGCATATGATTGTAATCCCTGCTTTGCGGAGGCAAAGACA  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAATAACAGCATATGATTGTAATCCCTGCTTTGCGGAGGCAAAGACA  681

seq1  GGAGGAGTCACCCGTGTCCCCAGAGCTGCTGTGCTGAAGCTGGTGCATCT  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAGTCACCCGTGTCCCCAGAGCTGCTGTGCTGAAGCTGGTGCATCT  731

seq1  GCTCAGGATACACAATGGCAACATAGGTTGTGGCTCCCAGGAGTAACTGT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGATACACAATGGCAACATAGGTTGTGGCTCCCAGGAGTAACTGT  781

seq1  GTAGAGGAGAGGAATGGGTGACTTCGGGTGTTGTGTCTCTGAGAGGCGAG  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGAGAGGAATGGGTGACTTCGGGTGTTGTGTCTCTGAGAGGCGAG  831

seq1  AGGCTGCAGTGTTCTTGATCTGGGCACTGGTTACTTCAACTGGGGGGCAG  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTGCAGTGTTCTTGATCTGGGCACTGGTTACTTCAACTGGGGGGCAG  881

seq1  GAGTGTTGGCAACTGATCCGCCTCCAGGATTAAATTCAGTGTGGTCAAAC  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTGGCAACTGATCCGCCTCCAGGATTAAATTCAGTGTGGTCAAAC  931

seq1  TGATAAAGGGGTGGGGCTTGCTGTGCTGTCCCCAGAGCGTGGTGCACAGG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAAGGGGTGGGGCTTGCTGTGCTGTCCCCAGAGCGTGGTGCACAGG  981

seq1  GTGGCAGGCCTTACAATGTTTTGGTGTATTCGCTGCTTAGGAACTGTTAC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAGGCCTTACAATGTTTTGGTGTATTCGCTGCTTAGGAACTGTTAC  1031

seq1  ACTCTCCACAGCATGGTGAGATGGGTCATAGTTAGTGTTAGACCCACACC  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCCACAGCATGGTGAGATGGGTCATAGTTAGTGTTAGACCCACACC  1081

seq1  CAAAGCCTCCTTGCTGGCATCTGAAATGAGCCAGGAATTC  1132
      ||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCCTCCTTGCTGGCATCTGAAATGAGCCAGGAATTC  1121

seq1: chr17_14305805_14306900
seq2: B6Ng01-089P12.g_72_1162

seq1  GAATTCTTTGACTTGTCTCTTGAGTTTTCAGTGATGAAATTGAGAAAACA  50
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTACTTGTCTCTTGAGTTTTCAGTGATGAAATTGAGAAAACA  50

seq1  GGTTAAGCAGAGAATGAATGAGCCTCTAATGTCCTGGTTTGGTGTTCATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAGCAGAGAATGAATGAGCCTCTAATGTCCTGGTTTGGTGTTCATC  100

seq1  CTGACAACCCCCGCCCCGGTCACCCTATGACCCTGGGCACTGCTCTCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAACCCCCGCCCCGGTCACCCTATGACCCTGGGCACTGCTCTCTGG  150

seq1  GTTCTGAATGGGGAGTGTCTCCTTGGAACGCTGAATGGATGATCAGATCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGAATGGGGAGTGTCTCCTTGGAACGCTGAATGGATGATCAGATCA  200

seq1  AGTGAATCTAAAGGTCAGAACGAGGGACAGTCCTAAGTAGTGAAGGTCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAATCTAAAGGTCAGAACGAGGGACAGTCCTAAGTAGTGAAGGTCAC  250

seq1  GGGAGTGCTTGGCCTTGACTTAGCTACTGATACACAAACACAAGAAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTGCTTGGCCTTGACTTAGCTACTGATACACAAACACAAGAAGGCA  300

seq1  ATGGATGGCCATTATTGACCCCGGCTCTTTAACTGACCATGACATCATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATGGCCATTATTGACCCCGGCTCTTTAACTGACCATGACATCATAT  350

seq1  TTTCAGTAAAAACAAACCAAGACTTAACCTTCATTCTTTATTTGGCCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTAAAAACAAACCAAGACTTAACCTTCATTCTTTATTTGGCCCAT  400

seq1  CCATCATGTTTTTTAAAGAGTACACTGGATTGTCTTGAACACCAGATGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCATGTTTTTTAAAGAGTACACTGGATTGTCTTGAACACCAGATGAT  450

seq1  ATCCAAACAGGAGATACACACAATATCTGTGTGCTTGGTTTGAGTGGAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAACAGGAGATACACACAATATCTGTGTGCTTGGTTTGAGTGGAGA  500

seq1  TGCAGTCTTCACAAGGCATGGAGAGGTGGGGCCTTTCTGAGATGGCTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTCTTCACAAGGCATGGAGAGGTGGGGCCTTTCTGAGATGGCTGGT  550

seq1  GCTGAGCCTATGTCCTAATGAATGGCTGAGCCTGAGAGGCCTTCCAGACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAGCCTATGTCCTAATGAATGGCTGAGCCTGAGAGGCCTTCCAGACC  600

seq1  CTGCCTCCACAGGAGGGTCCCCAGAAGTGACCATTTAGAAGGCACAGGTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTCCACAGGAGGGTCCCCAGAAGTGACCATTTAGAAGGCACAGGTC  650

seq1  CCCTGCAGACACCAGAGCTGTGAAGACGCTAATCTTTCTTCCCTGCACGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGCAGACACCAGAGCTGTGAAGACGCTAATCTTTCTTCCCTGCACGC  700

seq1  TATGCCG-TTCTTCACTCTGGTACAGCAGAAGGACGGGCAGCAGAAACCC  749
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCGTTTCTTCACTCTGGTACAGCAGAAGGACGGGCAGCAGAAACCC  750

seq1  AGTTCTCCCTGCATCTACATTCCATTAGAATCTCCGTGGAAGTGCGTGCG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTCCCTGCATCTACATTCCATTAGAATCTCCGTGGAAGTGCGTGCG  800

seq1  GTCCCGGAAATGAGCAGCCTGTAACCCATATTTGGAGGTCAGGCCTCACC  849
      |||||||||||||||||||||||||||||||||||||||||| | |||||
seq2  GTCCCGGAAATGAGCAGCCTGTAACCCATATTTGGAGGTCAGCCTTCACC  850

seq1  TTCCCGTGGGCTCA-TTACCAAAGGTGTTCAGCTCCCTGCTGCTACCGGT  898
      |||||||||||||| ||||| || ||||||||||||||||||||||| ||
seq2  TTCCCGTGGGCTCATTTACCCAAAGTGTTCAGCTCCCTGCTGCTACC-GT  899

seq1  TCACATTTTTAAGCCCACTCTTTTCTCTTCTGCTGTGCTTTGTCAT-CCA  947
      | |||||||||||||||||||||||||||||||||||||||| ||| |||
seq2  TTACATTTTTAAGCCCACTCTTTTCTCTTCTGCTGTGCTTTGCCATCCCA  949

seq1  CTGCAGGAGGAGTCCCTAACCCTAACC-CTCCCGGCCTCCAGCAGGTGAG  996
      ||||| ||||||||||||||||||||| |||| || || ||||| |||||
seq2  CTGCA-GAGGAGTCCCTAACCCTAACCTCTCCTGG-CTTCAGCA-GTGAG  996

seq1  CAGACAGACTCCTTATCTCTTGTTTTCTCAGAACCTTCTGAATTACCCCT  1046
      ||||  |||||| ||||||||||||||| |||||  |||| |||||||||
seq2  CAGAACGACTCCGTATCTCTTGTTTTCTTAGAAC--TCTG-ATTACCCCT  1043

seq1  CTGGGGTATTGCATTGCCAGTGGGGGAGGGGGAGCCTGGATCTG-ACAAG  1095
      || ||||| |||| ||||||||||| |||||||| ||||||||| |||||
seq2  CT-GGGTAATGCA-TGCCAGTGGGGAAGGGGGAG-CTGGATCTGTACAAG  1090

seq1  G  1096
      |
seq2  G  1091