BAC Information

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BAC

Clone NameB6Ng01-101M03
Chromosome17 (Build37)
Map Location 61,220,795 - 61,221,841
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043549
Downstream geneLOC433129, EG620725, LOC100043560
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101M03.bB6Ng01-101M03.g
ACCDH910843DH910844
length1,0461,054
definitionDH910843|Mus musculus domesticus DNA, BAC clone: B6Ng01-101M03, 5' end.DH910844|Mus musculus domesticus DNA, BAC clone: B6Ng01-101M03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgaaaccaacacaagctaccagaagatggaagccaaaggaaca
cacaggaagactcatgttgtatagacatccttccttcagacatctggtct
ctgggccatttgggaaaaaaatcagtctttaaattaatgatatcttgtta
gagcagcaaagaggaaaataagacagaatatataggctcccatgcagtta
cacataggcacctatgcagccacacagcttagtggcttttttttttttaa
ttagatagtttctttatttacatttcaaatgttatcccctttcctggttc
ccctccgaaaacccaactattccatcgccatgcccctgctcactaagcca
cccactcctgcctccctatcctggcatttccctatactggggtattgagc
cttctcaggcccaagggcctctcctgatgtcccacaagtccatcttctgt
tacatatgtggctggaacattaagtatctccatgtgtacgctttggttgt
tggtttagtccctgggagctctgcaggtattctttggttcatattgttgt
tcctcctatggggctgtaaaccccttcagctccttgggtactttctctag
ctcctccgttggggactctactcagtccaatggatgactgtgagcaccca
cttctgtaattgtcaggtactgacaaagtctatcagaagacagctatatc
aggctcctgtcagcaagcacttgttggcatccacaatagtgtctgggttt
ggcaaatatatatgagatggatccccaagtgggacagtcactggatggcc
tttgcttcagtttctgctccgaacttttttctctgtatctactccctttg
gtattttgataccccttcttagaaggatctaagtctgttttttttttttt
aatagttcaatgtacctgaaattttggtaaagagcaataatgacttcttc
agagattctgataaaatatgctgggagtcttgagtaggagtctaaactcc
agttacaaacctccacagcattttatatagcactcatactatcatg
gaattctctgtttagctctgtaccctatttttaatagggttattttgttc
tctgaagtcttcttgagctctttgtatatattggaatattagccctcttt
ctggtgtaggattggtaaagatcttttcctgttggttgcctttttgtcct
attgacagtcctttgcctttgcaattttatgggatcccatttgccaatcc
cttttcccagtacataaaccattgctgttctgttcaggaaaatttcccct
gtgcccatgtgtttgaggcttttccccactttctcttctactagattcag
tgtatctgattttatatgaaggcccttgattcacttggatttgagctttg
tacagagaggtaaaaatggatcaatttgcattcttctacatattcattgc
cagttgaaccagcaccatttgttgaaaatgctgtctttattccactggat
gattttagttcctttgtcaacgatcaagtgaccatagatgtgtgggttca
tttctgggtcttcaattctattccattgatttacctgcctgtcactgtac
caatatcatgcagtttttatcacagttgctctgtagtataacttgaggtc
agggatggtgattccacgagaagtttcttttattgttgagaatagttttt
cactatgctgggttcattgtttattacaaatgaattttagaattgccttt
ttctaactctatgattgagttgggaatttttaatggggtttgcattgaat
ctgtagacaagtaaaaacttcaaatgcattgatttatagtagtggcagtg
taagatcattaattttctactataatgatcatttaatgtcattgttaaat
aattataatcttaaattttgacacattgctttctcctagaagcagcggaa
ttatataacttagatgattcaagaaatagttgaattaccactgagaatcg
tcagtgctgtaactccaagattaatttattggagttctagcaacaagatc
tagttagtgagggacagtctcatgaagaatacttacgtgcactggaagct
tata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_61220795_61221841
seq2: B6Ng01-101M03.b_44_1089

seq1  GAATTCCTGAAACCAACACAAGCTACCAGAAGATGGAAGCCAAAGGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAAACCAACACAAGCTACCAGAAGATGGAAGCCAAAGGAACA  50

seq1  CACAGGAAGACTCATGTTGTATAGACATCCTTCCTTCAGACATCTGGTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGAAGACTCATGTTGTATAGACATCCTTCCTTCAGACATCTGGTCT  100

seq1  CTGGGCCATTTGGGAAAAAAATCAGTCTTTAAATTAATGATATCTTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCATTTGGGAAAAAAATCAGTCTTTAAATTAATGATATCTTGTTA  150

seq1  GAGCAGCAAAGAGGAAAATAAGACAGAATATATAGGCTCCCATGCAGTTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGCAAAGAGGAAAATAAGACAGAATATATAGGCTCCCATGCAGTTA  200

seq1  CACATAGGCACCTATGCAGCCACACAGCTTAGTGGCTTTTTTTTTTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGGCACCTATGCAGCCACACAGCTTAGTGGCTTTTTTTTTTTTAA  250

seq1  TTAGATAGTTTCTTTATTTACATTTCAAATGTTATCCCCTTTCCTGGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAGTTTCTTTATTTACATTTCAAATGTTATCCCCTTTCCTGGTTC  300

seq1  CCCTCCGAAAACCCAACTATTCCATCGCCATGCCCCTGCTCACTAAGCCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCGAAAACCCAACTATTCCATCGCCATGCCCCTGCTCACTAAGCCA  350

seq1  CCCACTCCTGCCTCCCTATCCTGGCATTTCCCTATACTGGGGTATTGAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTCCTGCCTCCCTATCCTGGCATTTCCCTATACTGGGGTATTGAGC  400

seq1  CTTCTCAGGCCCAAGGGCCTCTCCTGATGTCCCACAAGTCCATCTTCTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCAGGCCCAAGGGCCTCTCCTGATGTCCCACAAGTCCATCTTCTGT  450

seq1  TACATATGTGGCTGGAACATTAAGTATCTCCATGTGTACGCTTTGGTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATGTGGCTGGAACATTAAGTATCTCCATGTGTACGCTTTGGTTGT  500

seq1  TGGTTTAGTCCCTGGGAGCTCTGCAGGTATTCTTTGGTTCATATTGTTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTTAGTCCCTGGGAGCTCTGCAGGTATTCTTTGGTTCATATTGTTGT  550

seq1  TCCTCCTATGGGGCTGTAAACCCCTTCAGCTCCTTGGGTACTTTCTCTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTATGGGGCTGTAAACCCCTTCAGCTCCTTGGGTACTTTCTCTAG  600

seq1  CTCCTCCGTTGGGGACTCTACTCAGTCCAATGGATGACTGTGAGCACCCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCCGTTGGGGACTCTACTCAGTCCAATGGATGACTGTGAGCACCCA  650

seq1  CTTCTGTAATTGTCAGGTACTGACAAAGTCTATCAGAAGACAGCTATATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGTAATTGTCAGGTACTGACAAAGTCTATCAGAAGACAGCTATATC  700

seq1  AGGCTCCTGTCAGCAAGCACTTGTTGGCATCCACAATAGTGTCTGGGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCCTGTCAGCAAGCACTTGTTGGCATCCACAATAGTGTCTGGGTTT  750

seq1  GGCAAATATATATGAGATGGATCCCCAAGTGGGACAGTCACTGGATGGCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAATATATATGAGATGGATCCCCAAGTGGGACAGTCACTGGATGGCC  800

seq1  TTTGCTTCAGTTTCTGCTCCGAAC-TTTTTCTCTGTATCTACTCCCATTG  849
      |||||||||||||||||||||||| ||||||||||||||||||||| |||
seq2  TTTGCTTCAGTTTCTGCTCCGAACTTTTTTCTCTGTATCTACTCCCTTTG  850

seq1  GTATTTTGATACCCCTTCTAAGAAGGATCTAAGTCTGTTTTTTTTCTTTT  899
      ||||||||||||||||||| ||||||||||||||||||||||||| ||||
seq2  GTATTTTGATACCCCTTCTTAGAAGGATCTAAGTCTGTTTTTTTT-TTTT  899

seq1  TAATAGTTCAATGTACCTGAAATTTTGGTAAAAGAGCAAATAATGACTTC  949
      ||||||||||||||||||||||||||||| ||||||| ||||||||||||
seq2  TAATAGTTCAATGTACCTGAAATTTTGGT-AAAGAGC-AATAATGACTTC  947

seq1  TTCAGAGAATTCTGATAAATAGTGCT-GGAGTCCTGAGTAGGAGTCTAAA  998
      ||||||| |||||||||||   |||| |||||| ||||||||||||||||
seq2  TTCAGAG-ATTCTGATAAAATATGCTGGGAGTCTTGAGTAGGAGTCTAAA  996

seq1  CT-CAGTTACAAA-CTCCACAGCATTTTATATAGCACTCATACTAATCAT  1046
      || |||||||||| |||||||||||||||||||||||||||||| |||||
seq2  CTCCAGTTACAAACCTCCACAGCATTTTATATAGCACTCATACT-ATCAT  1045

seq1  G  1047
      |
seq2  G  1046