BAC Information

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BAC

Clone NameB6Ng01-106M02
Chromosome17 (Build37)
Map Location 59,803,991 - 59,934,047
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC668648, 2610034M16Rik, Nudt12, 4930505H01Rik, LOC100043537, LOC100043542
Downstream geneLOC100043549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-106M02.bB6Ng01-106M02.g
ACCDH914405DH914406
length4621,138
definitionDH914405|Mus musculus domesticus DNA, BAC clone: B6Ng01-106M02, 5' end.DH914406|Mus musculus domesticus DNA, BAC clone: B6Ng01-106M02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,933,587 - 59,934,047)(59,803,991 - 59,805,002)
sequence
gaattcacatgtgttttcaaagtatgtccgtgcagtgttttagtttgaaa
cactagcatgttcacattcacaatgagaaacatatactaacacttttaaa
agtgcttcactcacagtttgaaagaatccggggcattcattcgttcactt
tgttatgttccttgctgtaatttaaaacggaaatgatttccaaattagat
caagcttctaattatgaaatgcacaagaggttctttgttgtttttatttt
aatatgctatttccaccaggaaatggattgaaagcacatgtgtgttgggt
gtagaatgtacagcaaacttaataattaatgacatttcatactaaattac
ttatttaaaaatcatgagtatgctacagatactagaagaattacattgta
tgatgactattccattatttttatccagtcaaatgagaaaaatgtgtgtg
tgtgtgtgtgtg
gaattcttcagttgaggttccctcttcctttgttaacaattaaaaattaa
attgaaaagtaataagcataagtgtgcaaatatctttgtagaaggatata
aaatcctttggcatgagcccaggaatggtatagatgggtcatatgatagt
tacattccaatttcttttcaggataattttaattgatttcaatgtagata
cagtaatttccctcccaccagcaatgtgtaagagcagaagcaataatatt
gaggtaataataatgtatatattaaaaaaagtcacaaagaaaaggctcag
agtctaatggattcactgccaagttcttaaagaacttgattgaactgaga
gtagtactatttaaattattccataaaacagagagagaaagtcttcagaa
gtggttttacaaaacccgtattaaactgaaaacaaaaccacttaaagaca
gcaactacaagaaaagaaaatggacctaaggagaatctattactattttt
ttttaatcaacttagcttcgcatcaaactgcctcctaaataattaccttt
atacgctcagattagactacctctcaatccacataagagacatttctttg
gacagtggatggtggttactacagagattcacaatttgccaagcccccaa
ggctcagggagtacagaggcagagggagtagtaaaactggaaaacaagag
caatgaaatggtaatttggggacagtccccacagctgcggttgcttgcac
aacctattcgaaggcaacactagtcaaccagatagcatggtcaaatcatt
tgcaatgttgtgaggaacattttcattaatttctactgtgcctcctttaa
tttccacaacagtatataagtattgtacccattatgctctatatatctta
actggatatgtcattgttttactaaagataaccatgtagacatagacgag
aaggtatttaaacatagttttgatgcatttccccgaaaaaaatgtaaata
atataagcatattaatgtttttggcttttgtacttccaggaaattgttgc
tactacatttatacatcattgcttgatttattcttatgcaaatcattttc
tgggcttatgttcctcattggtatcctcctttattaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_59933587_59934047
seq2: B6Ng01-106M02.b_35_496 (reverse)

seq1  CACACACACACACACACACATTTTTCTCATTTGACTGGATAAAAATAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACATTTTTCTCATTTGACTGGATAAAAATAATG  50

seq1  GAATAGTCATCATACAATGTAATTCTTCTAGTATCTGTAGCATACTCATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGTCATCATACAATGTAATTCTTCTAGTATCTGTAGCATACTCATG  100

seq1  ATTTTTAAATAAGTAATTTAGTATGAAATGTCATTAATTATTAAGTTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTAAATAAGTAATTTAGTATGAAATGTCATTAATTATTAAGTTTGC  150

seq1  TGTACATTCTACACCCAACACACATGTGCTTTCAATCCATTTCCTGGTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACATTCTACACCCAACACACATGTGCTTTCAATCCATTTCCTGGTGG  200

seq1  AAATAGCATATTAAAATAAAAACAACAAAGAACCTCTTGTGCATTTCATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCATATTAAAATAAAAACAACAAAGAACCTCTTGTGCATTTCATA  250

seq1  ATTAGAAGCTTGATCTAATTTGGAAATCATTTCCGTTTTAAATTACAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAAGCTTGATCTAATTTGGAAATCATTTCCGTTTTAAATTACAGCA  300

seq1  AGGAACATAACAAAGTGAACGAATGAATGCCCCGGATTCTTTCAAACTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACATAACAAAGTGAACGAATGAATGCCCCGGATTCTTTCAAACTGT  350

seq1  GAGTGAAGCACTTTTAAAAGTGTTAGTATATGTTTCTCATTGTGAATGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGAAGCACTTTTAAAAGTGTTAGTATATGTTTCTCATTGTGAATGTG  400

seq1  AACATGCTAGTGTTTCAAACTAAAACACTGCAC-CACATACTTTGAAAAC  449
      |||||||||||||||||||||||||||||||||  |||||||||||||||
seq2  AACATGCTAGTGTTTCAAACTAAAACACTGCACGGACATACTTTGAAAAC  450

seq1  ACATGTGAATTC  461
      ||||||||||||
seq2  ACATGTGAATTC  462

seq1: chr17_59803991_59805002
seq2: B6Ng01-106M02.g_214_1206

seq1  ATAGTTACATTCCAATTTCTTTTCAGGATAATTTTAATTGATTTCAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTTACATTCCAATTTCTTTTCAGGATAATTTTAATTGATTTCAATGT  50

seq1  AGATACAGTAATTTCCCTCCCACCAGCAATGTGTAAGAGCAGAAGCAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACAGTAATTTCCCTCCCACCAGCAATGTGTAAGAGCAGAAGCAATA  100

seq1  ATATTGAGGTAATAATAATGTATATATTAAAAAAAGTCACAAAGAAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGAGGTAATAATAATGTATATATTAAAAAAAGTCACAAAGAAAAGG  150

seq1  CTCAGAGTCTAATGGATTCACTGCCAAGTTCTTAAAGAACTTGATTGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAGTCTAATGGATTCACTGCCAAGTTCTTAAAGAACTTGATTGAAC  200

seq1  TGAGAGTAGTACTATTTAAATTATTCCATAAAACAGAGAGAGAAAGTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAGTAGTACTATTTAAATTATTCCATAAAACAGAGAGAGAAAGTCTT  250

seq1  CAGAAGTGGTTTTACAAAACCCGTATTAAACTGAAAACAAAACCACTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTGGTTTTACAAAACCCGTATTAAACTGAAAACAAAACCACTTAA  300

seq1  AGACAGCAACTACAAGAAAAGAAAATGGACCTAAGGAGAATCTATTACTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGCAACTACAAGAAAAGAAAATGGACCTAAGGAGAATCTATTACTA  350

seq1  TTTTTTTTTAATCAACTTAGCTTCGCATCAAACTGCCTCCTAAATAATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTAATCAACTTAGCTTCGCATCAAACTGCCTCCTAAATAATTA  400

seq1  CCTTTATACGCTCAGATTAGACTACCTCTCAATCCACATAAGAGACATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTATACGCTCAGATTAGACTACCTCTCAATCCACATAAGAGACATTT  450

seq1  CTTTGGACAGTGGATGGTGGTTACTACAGAGATTCACAATTTGCCAAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGACAGTGGATGGTGGTTACTACAGAGATTCACAATTTGCCAAGCC  500

seq1  CCCAAGGCTCAGGGAGTACAGAGGCAGAGGGAGTAGTAAAACTGGAAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAGGCTCAGGGAGTACAGAGGCAGAGGGAGTAGTAAAACTGGAAAAC  550

seq1  AAGAGCAATGAAATGGTAATTTGGGGACAGTCCCCACAGCTGCGGTTGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAATGAAATGGTAATTTGGGGACAGTCCCCACAGCTGCGGTTGCT  600

seq1  TGCACAACCTATTCGAAGGCAACACTAGTCAACCAGATAGCATGGTCAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAACCTATTCGAAGGCAACACTAGTCAACCAGATAGCATGGTCAAA  650

seq1  TCATTTGCAATGTTGTGAGGAACATTTTCATTAATTTCTACTGTGCCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGCAATGTTGTGAGGAACATTTTCATTAATTTCTACTGTGCCTCC  700

seq1  TTTAATTTCCACAAACAGTATATAAGTATTGTACCCATTATGCTCTATAT  750
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTCCAC-AACAGTATATAAGTATTGTACCCATTATGCTCTATAT  749

seq1  ATCTTTAACTGGATATGTCATTGTTTTACTAAAGATAACCATGTAGACAT  800
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATC-TTAACTGGATATGTCATTGTTTTACTAAAGATAACCATGTAGACAT  798

seq1  AGACGAGAAGGTATTTAAACATAGTTTTGATTGCATTTCCCCGAAAAAAA  850
      |||||||||||||||||||||||||||||| |||||||||||| ||||||
seq2  AGACGAGAAGGTATTTAAACATAGTTTTGA-TGCATTTCCCCG-AAAAAA  846

seq1  ATGTTAAATATATTAAAGCATATTTATGTATTTTGGGCTTTTTGTACTTC  900
      |||| ||  ||||  ||||||||| |||| ||||||   |||||||||||
seq2  ATGTAAATAATAT--AAGCATATTAATGT-TTTTGG--CTTTTGTACTTC  891

seq1  CAGGGAAATTGTTTGCTTACTACATTTATACATTCATTGCTTGTATTTAT  950
      || |||||||| |||| ||||||||||||||| |||||||||| ||||||
seq2  CA-GGAAATTG-TTGC-TACTACATTTATACA-TCATTGCTTG-ATTTAT  936

seq1  TCTTATGGCAAATCATTTTCTGGTCTTTATGTTCTTCATGTGGTGATCCT  1000
      |||||| |||||||||||||||| | |||||||| |||| |||| |||||
seq2  TCTTAT-GCAAATCATTTTCTGGGC-TTATGTTCCTCAT-TGGT-ATCCT  982

seq1  CCTTTTATTAAA  1012
      || |||||||||
seq2  CC-TTTATTAAA  993