BAC Information

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BAC

Clone NameB6Ng01-107E11
Chromosome17 (Build37)
Map Location 37,271,634 - 37,272,624
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC630294, LOC672718, ENSMUSG00000073403, LOC675325, LOC626268, EG667977, LOC625785, H2-T3, LOC100043127, EG667827, LOC435525, LOC677333, LOC100043134, LOC625881, Rpp21, Trim39, H2-M10.2, H2-M10.1, H2-M10.3, Gm318, LOC100043140, LOC674152, LOC383240, LOC224752, H2-M10.4, H2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973
Downstream geneOlfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107E11.bB6Ng01-107E11.g
ACCDH914787DH914788
length1,169977
definitionDH914787|Mus musculus domesticus DNA, BAC clone: B6Ng01-107E11, 5' end.DH914788|Mus musculus domesticus DNA, BAC clone: B6Ng01-107E11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctaaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagagactgccatatccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacccagatgtagctgtctcttgtgagactatgccggggcctagcaaac
acagaagtggatgctcacagtcagctaatggatggataacagggctccca
atggaggagctagagaagtagccaaggagctaaagggatctgcaccctat
aggtggaacaacattatgaactaaccagtaccccggagctctgactctag
ctgcaatatattcaaagatggcctagtcgccatcactgtaaggaagccat
tggacttgcaactttatatgccccagtaaaggaaaccagggccaaagggg
atgggtggcgaggagtggg
gaattcctgggtttgtactcagcatttcccccaaggactcactcaggaag
ggcataattaatttgggtggtacatatccatcagagtcatgaaaggtcag
atgactatgagagctaagaggaagaacatcaatttgcattttgtgtccca
attgaacctcaggacatctctggctgtcctggaattcactttgtagagca
ggctggctcaaagaccaacctgccttagctttctaagtattgggaataaa
attgtgggccattaccacctgtcccagaagaatcatttatttttgtgtac
tctgaaaatattggtatactgaataatacatcttctctatttgttgcccc
tgttgacaagagtttggatcatgtgtgtggtaagttaactaaaaaactta
ctgtttaattcatagtggggaatatagtttaaggaagtattttatggaga
tgtatttttaaagggcatatcacattccccaagtcttccttcaacctctc
tcatgtgttctagaccacagactttcctcctgtgaagtttgattcactta
atttccaaacattaagaataacccttacaggtgcttggcatcaaacactt
ttacttagcagtagaggagagattctacaaatcttttcttgtatctttga
ctataaagccaaaactaaatggtaaaagatggcaaattcttctagttgtt
gatgatagaatgtggccccagccttaaatacatctttaccaactttctgt
tcttaaagtttccttcacagtttagtttggctttactagaaattgtgtta
gatttgtttattctgcttatcgtagacaaaaccccaacaaacaaaaacaa
acaaacacaacaacaagaccaagtcttctatctcattaagactagactta
gggggctggagagatgactcagaggttaagagcactgactgctcatcaga
tgtcctgagtcaattccagcaacacat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37271634_37272624
seq2: B6Ng01-107E11.g_67_1043

seq1  GAATTCCTGGGTTTGTACTCAGCATTTCCCCCAAGGACTCACTCAGGAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGGTTTGTACTCAGCATTTCCCCCAAGGACTCACTCAGGAAG  50

seq1  GGCATAATTAATTTGGGTGGTACATATCCATCAGAGTCATGAAAGGTCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAATTAATTTGGGTGGTACATATCCATCAGAGTCATGAAAGGTCAG  100

seq1  ATGACTATGAGAGCTAAGAGGAAGAACATCAATTTGCATTTTGTGTCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTATGAGAGCTAAGAGGAAGAACATCAATTTGCATTTTGTGTCCCA  150

seq1  ATTGAACCTCAGGACATCTCTGGCTGTCCTGGAATTCACTTTGTAGAGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAACCTCAGGACATCTCTGGCTGTCCTGGAATTCACTTTGTAGAGCA  200

seq1  GGCTGGCTCAAAGACCAACCTGCCTTAGCTTTCTAAGTATTGGGAATAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCTCAAAGACCAACCTGCCTTAGCTTTCTAAGTATTGGGAATAAA  250

seq1  ATTGTGGGCCATTACCACCTGTCCCAGAAGAATCATTTATTTTTGTGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTGGGCCATTACCACCTGTCCCAGAAGAATCATTTATTTTTGTGTAC  300

seq1  TCTGAAAATATTGGTATACTGAATAATACATCTTCTCTATTTGTTGCCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAATATTGGTATACTGAATAATACATCTTCTCTATTTGTTGCCCC  350

seq1  TGTTGACAAGAGTTTGGATCATGTGTGTGGTAAGTTAACTAAAAAACTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACAAGAGTTTGGATCATGTGTGTGGTAAGTTAACTAAAAAACTTA  400

seq1  CTGTTTAATTCATAGTGGGGAATATAGTTTAAGGAAGTATTTTATGGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTAATTCATAGTGGGGAATATAGTTTAAGGAAGTATTTTATGGAGA  450

seq1  TGTATTTTTAAAGGGCATATCACATTCCCCAAGTCTTCCTTCAACCTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTTAAAGGGCATATCACATTCCCCAAGTCTTCCTTCAACCTCTC  500

seq1  TCATGTGTTCTAGACCACAGACTTTCCTCCTGTGAAGTTTGATTCACTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGTTCTAGACCACAGACTTTCCTCCTGTGAAGTTTGATTCACTTA  550

seq1  ATTTCCAAACATTAAGAATAACCCTTACAGGTGCTTGGCATCAAACACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAAACATTAAGAATAACCCTTACAGGTGCTTGGCATCAAACACTT  600

seq1  TTACTTAGCAGTAGAGGAGAGATTCTACAAATCTTTTCTTGTATCTTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTAGCAGTAGAGGAGAGATTCTACAAATCTTTTCTTGTATCTTTGA  650

seq1  CTATAAAGCCAAAACTAAATGGTAAAAGATGGCAAATTCTTCTAGTTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAAAGCCAAAACTAAATGGTAAAAGATGGCAAATTCTTCTAGTTGTT  700

seq1  GATGATAGAATGTGGCCCCAGCCTTCAAATACATCTTTACCAACTTTCTG  750
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GATGATAGAATGTGGCCCCAGCCTT-AAATACATCTTTACCAACTTTCTG  749

seq1  TTCTTAAAAGTTTCCTTCACAGTTTAAGTTTGGCTTTACTAGAAATTGTG  800
      ||||| ||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTCTT-AAAGTTTCCTTCACAGTTT-AGTTTGGCTTTACTAGAAATTGTG  797

seq1  TTAGAATTGTTTATTCTGCTTATCGTTAGACAAAACCCCAAACAAACAAA  850
      ||||| ||||||||||||||||||| ||||||||||||| ||||||||||
seq2  TTAGATTTGTTTATTCTGCTTATCG-TAGACAAAACCCC-AACAAACAAA  845

seq1  AACAAAACAAAACAACAACAACAAGAACAAAGTCTTCTATCTCATTAAGA  900
      ||| |||||||   ||||||||||| || |||||||||||||||||||| 
seq2  AAC-AAACAAA--CACAACAACAAG-ACCAAGTCTTCTATCTCATTAAG-  890

seq1  ACTAGACTTAGGGGGCTGGAGAGATGACTCAGAGGTTAAGAGCACTGACT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGACTTAGGGGGCTGGAGAGATGACTCAGAGGTTAAGAGCACTGACT  940

seq1  GCTCATCCAGAGGTCCTGAGTTCAATTCCCAGCAACCACAT  991
      |||||| |||| |||||||| |||||| ||||||| |||||
seq2  GCTCAT-CAGATGTCCTGAG-TCAATT-CCAGCAA-CACAT  977