BAC Information

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BAC

Clone NameB6Ng01-107F15
Chromosome17 (Build37)
Map Location 22,017,606 - 22,018,838
singlet/doubletsinglet
Overlap genenone
Upstream geneV1re7, V1re4, LOC627884, Ppp2r1a, V1rf5, Zfp160, LOC627912, LOC435509, EG627924, 4933430A09, EG665654, EG665662, LOC665666, EG665669, V1rf1, V1rf2, V1rf4, V1rf3, A830058L05Rik, Zfp54, Zfp51, Zfp53, LOC100042508, Zfp52, BC049807, Zfp760, BC043476, 4930515G13Rik, 2610036F08Rik
Downstream geneLOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185, ENSMUSG00000046088, EG383218, EG433078, LOC100042679, A630033E08Rik, LOC671128
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-107F15.bB6Ng01-107F15.g
ACCDH914841DH914842
length1,2141,218
definitionDH914841|Mus musculus domesticus DNA, BAC clone: B6Ng01-107F15, 5' end.DH914842|Mus musculus domesticus DNA, BAC clone: B6Ng01-107F15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgatgttttctaaaccagcatttctgggcaaaacatttggca
cattcactacatttgtaaggtttctttccacttttggtttgtttcaacat
gaggacttctttagattcaaaaaccttatcaagctttgtaccattgtatt
ctttctttcctatgttgattccttgatttagactaatggtagagcacaaa
tttaaacagtttgcatggtttttatatttgcaagttaatctgttgttttc
agtttcatgtctgcttaggtttgatgattcaacagatgtagccctgaggt
tagttttagaaggtgtactttcagtggattcatgaatgattttgccaagc
tcatgacattcataagatttcacttggatatttacatgctcgtggacaat
atgctgtaggtcttgatccaacatgtcctcaaatttaggacacatgcaat
gattctctgaaaaaaaaaatgcatttagagatgacagggattagtggatg
agtaagacaaaatgtcatgtttcctgaagttttctaatgtaaattagtga
ttctcaaggatggaactctcaaaagtggactttcttgtttcacaatcatt
acatggatacttagaacaatctcaaaattcatgcatcaaatgacaggaaa
caatagccttctatttcttatttaccactatgcttggcagaaagtaaaaa
gaataggtgatgtagaagtaaaggactttgagaatggacctccctgaatg
accatgtaaagaaagtttctctattttcttgtttatgttttgtgatcgag
taacaaagtatagcttgggtcagctaggaattcattatgtaatccacatt
ggcatggaactcatgatgtaaaagccatgctgtaccaggactaaacatag
aaaccacaagtcaaaaactaaataaataagtaacaacaaattcacacaag
caacagctctttctctatttagaactttcctgattttaaaattcataaac
aactgaagactttaatgaaacagtaaaattactacagtgtagcaatatat
tttctgctctgactatcagtggtttttatatttgaagtttgataaagtag
atactatgtttgggggattaccagatttatactgatcctctttcaaagaa
tggaaagagaatgtaaaggaaagcatggagaccttctcgttgtaaccgga
ttcttattctggga
gaattcatacaggacagaagccttacaaatgtagtgaatgtgacaaatgc
tttacccgaaaatgtaatcttattattcatcaaaaaattcatacaggaga
aaaaccatataaatgtagtgagtgtgacaaatgctttacccacaaaggcg
gtcttagtattcatcagataactcatacaggagagaagccttacaaatgt
agtgaatgcaacaaatgcttcactcacaaaggtgatcttagacgtcatca
gagaattcattctggagagaaaccttataaatgtagtgaatgtgacaaat
gctttacccgcaaattcagtcttagaagtcatcagagaattcatacatga
gagcagccttacaaatgtagtgaatgcgacaaatgctttacctttaaaaa
ttgatcttagaattcatcagagaattcatatgggagagaaaccatacaaa
tgtagtgaatgtgaaaaatcttttacccagaaaagcaatcttagaattca
tcagagaattcatacaggagagaaaccttttaagtgtagtgaatgtgaca
aatgtgttaatcacaaaggtgattagcaatcatcagagaattcatatagg
agataagccttataaatgcagtgaatgtggcaaatgtgttgttaacaaat
acagtcttagtattcattatggaattcatacagaagagaaaccttataca
cgtaatgaatgtgatgaattctttagacataaatgtagtcttagcactca
tctgaaaatgtacacattagagaatttttacaaatgaagcaaatgagaca
aacccttcaccaagaaagatcatcttagaagtcatcaaagaatacataca
ggagagtgacctttcaatgttcatgttcaaatcctttattcttagcttat
ctcacagtacatcagagatttgtacaggagagaaacctcacaaatgtaac
acgaggaaggactttacctgaaaaatagtttcttccggaaaacatgtgca
tatatttacccagcggaattcttacacacttgacgctcacactagagtat
tatgaatatagactgtgaaagcatttagtgtttaatctagaactatgagc
atgatgctgaaaattcttgaattggacatgagaaatttcaatgttcagca
attctataagcaagtagaagccgagatcgttaaccttctatgggaagctg
atcatccaattggaggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_22017606_22018838
seq2: B6Ng01-107F15.b_42_1255

seq1  GAATTCTCTGATGTTTTCTAAACCAGCATTTCTGGGCAAAACATTTGGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGATGTTTTCTAAACCAGCATTTCTGGGCAAAACATTTGGCA  50

seq1  CATTCACTACATTTGTAAGGTTTCTTTCCACTTTTGGTTTGTTTCAACAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACTACATTTGTAAGGTTTCTTTCCACTTTTGGTTTGTTTCAACAT  100

seq1  GAGGACTTCTTTAGATTCAAAAACCTTATCAAGCTTTGTACCATTGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTTCTTTAGATTCAAAAACCTTATCAAGCTTTGTACCATTGTATT  150

seq1  CTTTCTTTCCTATGTTGATTCCTTGATTTAGACTAATGGTAGAGCACAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTCCTATGTTGATTCCTTGATTTAGACTAATGGTAGAGCACAAA  200

seq1  TTTAAACAGTTTGCATGGTTTTTATATTTGCAAGTTAATCTGTTGTTTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACAGTTTGCATGGTTTTTATATTTGCAAGTTAATCTGTTGTTTTC  250

seq1  AGTTTCATGTCTGCTTAGGTTTGATGATTCAACAGATGTAGCCCTGAGGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCATGTCTGCTTAGGTTTGATGATTCAACAGATGTAGCCCTGAGGT  300

seq1  TAGTTTTAGAAGGTGTACTTTCAGTGGATTCATGAATGATTTTGCCAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTTAGAAGGTGTACTTTCAGTGGATTCATGAATGATTTTGCCAAGC  350

seq1  TCATGACATTCATAAGATTTCACTTGGATATTTACATGCTCGTGGACAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGACATTCATAAGATTTCACTTGGATATTTACATGCTCGTGGACAAT  400

seq1  ATGCTGTAGGTCTTGATCCAACATGTCCTCAAATTTAGGACACATGCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGTAGGTCTTGATCCAACATGTCCTCAAATTTAGGACACATGCAAT  450

seq1  GATTCTCTGAAAAAAAAAATGCATTTAGAGATGACAGGGATTAGTGGATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCTCTGAAAAAAAAAATGCATTTAGAGATGACAGGGATTAGTGGATG  500

seq1  AGTAAGACAAAATGTCATGTTTCCTGAAGTTTTCTAATGTAAATTAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAAGACAAAATGTCATGTTTCCTGAAGTTTTCTAATGTAAATTAGTGA  550

seq1  TTCTCAAGGATGGAACTCTCAAAAGTGGACTTTCTTGTTTCACAATCATT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAAGGATGGAACTCTCAAAAGTGGACTTTCTTGTTTCACAATCATT  600

seq1  ACATGGATACTTAGAACAATCTCAAAATTCATGCATCAAATGACAGGAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGATACTTAGAACAATCTCAAAATTCATGCATCAAATGACAGGAAA  650

seq1  CAATAGCCTTCTATTTCTTATTTACCACTATGCTTGGCAGAAAGTAAAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAGCCTTCTATTTCTTATTTACCACTATGCTTGGCAGAAAGTAAAAA  700

seq1  GAATAGGTGATGTAGAAGTAAAGGACTTTGAGAATGGACCTCCCTGAATG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGGTGATGTAGAAGTAAAGGACTTTGAGAATGGACCTCCCTGAATG  750

seq1  ACCATGTAAAGAAAGTTTCTCTATTTTCTTGTTTATGTTTTGTGATCGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTAAAGAAAGTTTCTCTATTTTCTTGTTTATGTTTTGTGATCGAG  800

seq1  TAACAAAGTATAGCTTGGGTCAGCTAGGAATTCATTATGTAATCCACATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAAAGTATAGCTTGGGTCAGCTAGGAATTCATTATGTAATCCACATT  850

seq1  GGCATGGAACTCATGATGTAAAAGCCATGCTGTACCAGGACTAAACATAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATGGAACTCATGATGTAAAAGCCATGCTGTACCAGGACTAAACATAG  900

seq1  AAACCACAAGTCAAAAACTAAATAAATAAGTAACAACAAAATTCACACAA  950
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAACCACAAGTCAAAAACTAAATAAATAAGTAACAAC-AAATTCACACAA  949

seq1  GCAACAGCTCTTTCTCTATTTAGAACTTTCCTGATTTTAAAAATTCATAA  1000
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCAACAGCTCTTTCTCTATTTAGAACTTTCCTGATTTT-AAAATTCATAA  998

seq1  ACAACTGAAGACTTTAATGAAACAGTAAAATTACTACAGTTGTAGCAATA  1050
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ACAACTGAAGACTTTAATGAAACAGTAAAATTACTACAG-TGTAGCAATA  1047

seq1  TATTTTCTTGCTCTGACTATTCAGTGGTTTTTATATTTTGAAGTTTTGAT  1100
      ||||||| ||||||||||| ||||||||||||||| ||||||| ||||||
seq2  TATTTTC-TGCTCTGACTA-TCAGTGGTTTTTATA-TTTGAAG-TTTGAT  1093

seq1  TAAAAGTAGATACTATGTTTTGAGAGATTACACAGAATATAATACTGGAT  1150
        ||||||||||||||| |||| | |||||| ||||   | ||||| |||
seq2  --AAAGTAGATACTATG-TTTGGGGGATTAC-CAGA--TTTATACT-GAT  1136

seq1  CCTCTTCCAAAGAATGAAGAGA-AATGTAAAGGAAAAGCAATGAAGACCT  1199
      |||||| ||||||||| | ||| |||||||||| ||||| ||| ||||||
seq2  CCTCTTTCAAAGAATGGAAAGAGAATGTAAAGG-AAAGC-ATGGAGACCT  1184

seq1  TCTGTTGGTAACCAGGATTTCCTTTATTCTGGGA  1233
      |||  | |||||| |||||    |||||||||||
seq2  TCTCGTTGTAACC-GGATT---CTTATTCTGGGA  1214