BAC Information

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BAC

Clone NameB6Ng01-119G03
Chromosome17 (Build37)
Map Location 71,985,146 - 72,092,380
singlet/doubletdoublet
Overlap geneWdr43, 4632412N22Rik
Upstream geneDlgap1, Tgif1, LOC668724, LOC546695, LOC240156, Mylc2b, 2900073G15Rik, Myom1, Lpin2, Emilin2, LOC100043644, Smchd1, LOC100043879, Ndc80, LOC668740, Spdya, LOC623451
Downstream geneBC027072, Clip4, Alk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-119G03.bB6Ng01-119G03.g
ACCDH923610DH923611
length5341,116
definitionDH923610|Mus musculus domesticus DNA, BAC clone: B6Ng01-119G03, 5' end.DH923611|Mus musculus domesticus DNA, BAC clone: B6Ng01-119G03, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,091,839 - 72,092,380)(71,985,146 - 71,986,262)
sequence
tcacccacgggtacagctaaagaggctgaacttagcagatctgctgcaaa
gctgacgttttaagttgagaagatcatagacctctaattgtctcctcctc
ctcctcctcctcctcctcttcttcttctcctccctcctcctcctcctctt
ctccctcctcctccttcttcatttcttcttctcgtcttttcttattaaca
tcttctcctcctcctcctcttcctctcttcctcctcttcttcttcttcct
cttcttcctcttcttcctcttcctcttctaccccgttccacccccaaact
cctcctcttgcttgctggatttaaagacgagggtgagggggagcattttg
tgtgttgggtgccgggagggaaaactaaggtcgtgctatcccctccaggg
ttatcttgtaagacgaacaccaagaataacactgaattatcacgccatca
atacgtaagtggaagggatagtcacaggaatgaggaaggaactccattgg
gaaagtaagcgaccaggaggtgccatgctcaccc
gaattcttttaatttttttgaacgatacaaatggcaagatgttggttact
aaatattaagaaagattttgtcaggaagtttcagaacttcagttcagttc
tctgcacaggaagctgatagcaaaagtgtgatggacgggagtcccagacc
agggggccagaggagccagtgcgcccacctcctctatggatgcgaagctg
tgttttcatcagtcctgactgctgggactgggacattccagagtcattca
ttctctagtttaccttggaggctgctttgtgcctatgccaccttcttggc
ctaaacattattttccagtcttgacaagaacaacagttaatttgtaagag
agacagatttcgttaaagaattgtgtgagtcaagtaaagtgtgaaggtgt
gcccttttaatccagcactccagaggcataggctagcctgctctacgata
gttctaggatggtctgggctatccaccctcccaagtttgtttgcttgtat
gcatctgtgtgttcagaggacagttttatagtcagttctctccattttta
tatagattttggtcggctaaactaaagttgctgtccttgtataacaaatg
tctacctgttgcctgagccatctgtctggccccggatagtggtttttatt
ctagttactaaggagttagggcaagagttccgtgttcacgagctaacctg
aagactggttagatagctgcctagaattaatcaaccgtgtttctctttta
gcctgtcaagttagctgttgtttgcagagatggtcaagttcatctttttg
aacacatattaaatgggtaagtaagaggtttttaaattagagtttaaaag
cctgcttgtttctgtgttctttgtgttataatccaacctcccgctttgca
ttgtattcctgcttgttctgttagattattgtgaaaacattcttggttgc
acattcatatgactatgtgaagaactcagttgtggggggtgatgggctgt
gtcttttctttgttgttaaggagagcgcctttttcgtggggtgcaaatat
agtggatgccggtaataataataagttttgggagggactgcttgttcctc
cgtggttatttgcctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_72091839_72092380
seq2: B6Ng01-119G03.b_42_581 (reverse)

seq1  GGGTGAGCATGGCACCTCTTGGTCATTTATTTAGTCAATGGTGACTCTGG  50
      |||||||||||||||||| |||||  ||| ||   |||||| |  ||   
seq2  GGGTGAGCATGGCACCTCCTGGTCGCTTACTTTCCCAATGGAG-TTCCTT  49

seq1  TGTCATTGAAGAGATCAGCCCTGCCACTCTCATTTTAATAACATGATAAT  100
        |||||   | ||  | |||| |||||  | | || ||  | |||||||
seq2  CCTCATTCCTGTGACTATCCCTTCCACTTACGTATTGATGGCGTGATAAT  99

seq1  TCATGTGAGATTCATCTAGTTAGAGTTACAAGTCTGTCCCTGG-GGTGAG  149
      ||| |||  |||| |   ||| |  |||||||  |  |||||| || || 
seq2  TCA-GTGTTATTCTTGGTGTTCGTCTTACAAG-ATAACCCTGGAGGGGAT  147

seq1  AACAAGAGGTAGCTGGAGGCTCCAGG-ACCCAGTATAACATGTGCTCGAG  198
      | || ||  |   |     |||| || |||||  | |  |  |||||   
seq2  AGCACGACCTTAGTTTTCCCTCCCGGCACCCAACACACAAAATGCTCCCC  197

seq1  GCCACAATCTATTTTAACTACAGCAAGAAGGAGGAGGAGGAGGGGGGAGG  248
        |||  ||   ||||| | ||||||| | |||||||||   ||||| ||
seq2  CTCACCCTCGTCTTTAAATCCAGCAAGCAAGAGGAGGAGTTTGGGGGTGG  247

seq1  AAAGGGGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGA  298
      || |||| |||||| ||||| |||||||| |||||||| |||||||||||
seq2  AACGGGGTAGAAGAGGAAGAGGAAGAAGAGGAAGAAGAGGAAGAAGAAGA  297

seq1  AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAAG--GAGGAGGA  346
      ||| || ||||    ||| ||||| || || || ||||||  |   |  |
seq2  AGAGGAGGAAG----AGAGGAAGAGGAGGAGGAGGAGAAGATGTTAATAA  343

seq1  GGAAGGGAAAGGGGAGGAAGGGGA-AAGGAGGAAGGGGGAAGTGAGGAGG  395
      | || |   ||  || |||  | | |||||||| | ||||   |||||||
seq2  GAAAAGACGAGAAGAAGAAATGAAGAAGGAGGAGGAGGGAGAAGAGGAGG  393

seq1  AGGAGGA-GGAGGAGGAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGA  444
      ||||||| |||||| |||||||||||||||||||||||||||||||||||
seq2  AGGAGGAGGGAGGA-GAAGAAGAAGAGGAGGAGGAGGAGGAGGAGGAGGA  442

seq1  GACAATTAGAGGTCTATGATCTTCTCAACTTAAAACGTCAGCTTTGCAGC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTAGAGGTCTATGATCTTCTCAACTTAAAACGTCAGCTTTGCAGC  492

seq1  AGATCTGCTAAGTTCAGCCTCTTTAGCTGTACCCGTGGGTGAGAATTC  542
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGCTAAGTTCAGCCTCTTTAGCTGTACCCGTGGGTGAGAATTC  540

seq1: chr17_71985146_71986262
seq2: B6Ng01-119G03.g_67_1182

seq1  GAATTCTTTTAATTTTTTTGAACGATACAAATGGCAAGATGTTGGTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAATTTTTTTGAACGATACAAATGGCAAGATGTTGGTTACT  50

seq1  AAATATTAAGAAAGATTTTGTCAGGAAGTTTCAGAACTTCAGTTCAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAAGAAAGATTTTGTCAGGAAGTTTCAGAACTTCAGTTCAGTTC  100

seq1  TCTGCACAGGAAGCTGATAGCAAAAGTGTGATGGACGGGAGTCCCAGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACAGGAAGCTGATAGCAAAAGTGTGATGGACGGGAGTCCCAGACC  150

seq1  AGGGGGCCAGAGGAGCCAGTGCGCCCACCTCCTCTATGGATGCGAAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGCCAGAGGAGCCAGTGCGCCCACCTCCTCTATGGATGCGAAGCTG  200

seq1  TGTTTTCATCAGTCCTGACTGCTGGGACTGGGACATTCCAGAGTCATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCATCAGTCCTGACTGCTGGGACTGGGACATTCCAGAGTCATTCA  250

seq1  TTCTCTAGTTTACCTTGGAGGCTGCTTTGTGCCTATGCCACCTTCTTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAGTTTACCTTGGAGGCTGCTTTGTGCCTATGCCACCTTCTTGGC  300

seq1  CTAAACATTATTTTCCAGTCTTGACAAGAACAACAGTTAATTTGTAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACATTATTTTCCAGTCTTGACAAGAACAACAGTTAATTTGTAAGAG  350

seq1  AGACAGATTTCGTTAAAGAATTGTGTGAGTCAAGTAAAGTGTGAAGGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGATTTCGTTAAAGAATTGTGTGAGTCAAGTAAAGTGTGAAGGTGT  400

seq1  GCCCTTTTAATCCAGCACTCCAGAGGCATAGGCTAGCCTGCTCTACGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTTAATCCAGCACTCCAGAGGCATAGGCTAGCCTGCTCTACGATA  450

seq1  GTTCTAGGATGGTCTGGGCTATCCACCCTCCCAAGTTTGTTTGCTTGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGGATGGTCTGGGCTATCCACCCTCCCAAGTTTGTTTGCTTGTAT  500

seq1  GCATCTGTGTGTTCAGAGGACAGTTTTATAGTCAGTTCTCTCCATTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGTGTGTTCAGAGGACAGTTTTATAGTCAGTTCTCTCCATTTTTA  550

seq1  TATAGATTTTGGTCGGCTAAACTAAAGTTGCTGTCCTTGTATAACAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATTTTGGTCGGCTAAACTAAAGTTGCTGTCCTTGTATAACAAATG  600

seq1  TCTACCTGTTGCCTGAGCCATCTGTCTGGCCCCGGATAGTGGTTTTTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTGTTGCCTGAGCCATCTGTCTGGCCCCGGATAGTGGTTTTTATT  650

seq1  CTAGTTACTAAGGAGTTAGGGCAAGAGTTCCGTGTTCACGAGCTAACCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTACTAAGGAGTTAGGGCAAGAGTTCCGTGTTCACGAGCTAACCTG  700

seq1  AAGACTGGTTAGATAGCTGCCTAGAATTAATCAACCGTGTTTCTCTTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGGTTAGATAGCTGCCTAGAATTAATCAACCGTGTTTCTCTTTTA  750

seq1  GCCTGTCAAGTTAGCTGTTGTTTGCAGAGATGGTCAAGTTCATCTTTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCAAGTTAGCTGTTGTTTGCAGAGATGGTCAAGTTCATCTTTTTG  800

seq1  AACACATATTAAATGGGTAAGTAAGAGGTTTTTAAATTAGAGTTTAAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATATTAAATGGGTAAGTAAGAGGTTTTTAAATTAGAGTTTAAAAG  850

seq1  CCTGCTTGTTTCTGTGTTCTTTTGTGTTATAATCCAACCTCCCGCTTTGC  900
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCTGCTTGTTTCTGTGTTC-TTTGTGTTATAATCCAACCTCCCGCTTTGC  899

seq1  ATTGTATTCCTGCTTGTTCTGTTAGATTATTGTGAAAACATTCTTGGTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATTCCTGCTTGTTCTGTTAGATTATTGTGAAAACATTCTTGGTTG  949

seq1  CACATTCATATGACTATGTGAAGAACTCAAGTGT-GGGGGTGATGGGCTG  999
      |||||||||||||||||||||||||||||  ||| |||||||||||||||
seq2  CACATTCATATGACTATGTGAAGAACTCAGTTGTGGGGGGTGATGGGCTG  999

seq1  TGTCTTTTCTTTGTGGTT-AGGAGAGCGGC-TTTTCGTGGGGTGCATATA  1047
      |||||||||||||| ||| ||||||||| | ||||||||||||||| |||
seq2  TGTCTTTTCTTTGTTGTTAAGGAGAGCGCCTTTTTCGTGGGGTGCAAATA  1049

seq1  TAGTGAATGCCGGTAATAATAATAAG-TTTGGGAGGGACTTGCTTGTTTT  1096
      ||||| |||||||||||||||||||| |||||||||||| ||||||  ||
seq2  TAGTGGATGCCGGTAATAATAATAAGTTTTGGGAGGGAC-TGCTTG--TT  1096

seq1  CTCCCGTGGTTTATTTGCCTG  1117
      |  |||||| |||||||||||
seq2  CCTCCGTGG-TTATTTGCCTG  1116