BAC Information

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BAC

Clone NameB6Ng01-125N03
Chromosome17 (Build37)
Map Location 37,905,654 - 37,906,760
singlet/doubletsinglet
Overlap genenone
Upstream geneH2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121
Downstream geneOlfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125N03.bB6Ng01-125N03.g
ACCDH928349DH928350
length1,2621,084
definitionDH928349|Mus musculus domesticus DNA, BAC clone: B6Ng01-125N03, 5' end.DH928350|Mus musculus domesticus DNA, BAC clone: B6Ng01-125N03, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctaagaggaaaactcatagctctgagtgccgccaaaaagaagct
agagagagtatacaccagcagcttgacagcacacttaaaagctcaatcaa
aagaaagcaaattcacccaagaggtgtagacagcaggaaataatcaaact
tagggctgaaatcaaccaagtggaaacaaaaagaactatacaaagaatca
accaaccccggagctgtttttcttttgagaaaatcaacaagatagataaa
accttagccaaactaactagagggcacaggaacagtatggtaattaacaa
aatcagaaataaaaaaggagacataacaacagaacatgaggaaatccaaa
acatcatcagatcctactacaaaaggctatactcaacaaaactggaaacc
ttggatgcaatggacaattttgtagacagataccaggtaccatagttaaa
tcaggatcagattaacaatctaaacaggcccatttcccctaaagaaataa
aagctgtcattaatcatctccctaccaaaagaatatcccaggaccagatg
ggtttagtgcagagttctatcagaccttcagagaagacctatttgcaata
ctcctcaaactattccacaaaataaaaagagaaggtactctacccaattc
attctatgaagccacattactctgatacctaaaccacaaaaagacccaac
aaagaaagagaacttcagaccaatttcccttatgaacatccatgcaaaaa
taataaaattctcacaaaccgaatccaagaacacatcaaaatgatcatcc
aacatgatcaagtaggcttcatcccagggatgcacggatggtttaatata
tggaaatctatcaacgcaatccagtatataaacaaacgcaaagacaaaac
ccacatgatcatctcatagatgatgagaaaccatttgacaaaattcaaca
cccattcatgataaaagtcttggaaagatcagaaattcaaggctcatatc
taaacatataaaagcattatgcagcaaaccagtagtcacatcaaagtaaa
tggaaagaagctgttagcatcccacttaaaattaaggactagacagctgc
ccactttcttcctttctattcaattatgaacttgagcttaattggcagat
tgtgggattttcttgtctttaatttatggggggaaaccaggtaagttgta
cattctaagcaatagacctgtgttttgtagaaataatacctggaatagta
ggagctcataga
gaattccacttgagattcataccagaaagttctattttcataatgaccca
tgaaaggagaatggtgtctcatgtactgtatatagacaaatatatgtcca
catacagatatgaaggcttttcagaaagatggaagtatcagaataggctg
aaaaggataagccactgtctcaaatcttaaagtaattttcttcaagtaaa
atttcacattcatcattttgagctgtttcagactaaagctgcaaatactt
tggagcccaatgtgaatacatagtaaaatgttcattgaagtgcaaaagtg
cctgcgctgagaagcctcttgtggaggaagttaggtgcatcatgtggcta
tcctctgcagtcacccatctagtaacagaatgaagccattcacatagagg
tgcaatataatattttacataacgattatgtgttctgtctattacataga
tcttcagtgttataaagattccatgtgtagtaaacactggtcagctttaa
aagattagaaatgtgcattggtggactggattccttattttattctctgt
ctgtctgtctgtctgtctctctctcataaatgtttttttaatcttctgtt
agcagatggaaagcatgaaacactattaattctctttctgaaacgcatca
gtgtctgtgcagaaattctcaggaaaatgttcattatcaccacaatgtag
tcactatttctaaaattctataatagtacacatggtttatgtagattgtt
aggaaaagattatttggatgctcatgccccacaataactcaccaaaggac
catgtgtcaccagctgagtgacactttagcccgacacaatagaaattgtt
agattacttactagattaaggtgcactatgtaatgagagtctccagtctc
agcattgcattgtgttgatttcccatggacttaagctattttctgagaag
aaagagccatgatctgagtgactgttacatccctgagatgagaaaaataa
attacagcagactcaaagtgtttgaggtcagtgttcattttacacttagt
cacttctctagtcagattggcaccttactgtagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37905654_37906760
seq2: B6Ng01-125N03.g_69_1152 (reverse)

seq1  GCTACAGCTAAGTTGCCAATACTGGACTTAGAGAAAGTGAACTAAAGTGT  50
      ||||||| |||| ||||||| || ||| ||||| ||||| ||| ||||||
seq2  GCTACAG-TAAGGTGCCAAT-CT-GAC-TAGAG-AAGTG-ACT-AAGTGT  43

seq1  AAAAATGAACAACTGACACTCAAAACACTTTTGAGTTCTTGCTGTTATTT  100
       ||||||||| |||||| ||| |||||| |||||||   ||||| || ||
seq2  -AAAATGAAC-ACTGAC-CTC-AAACAC-TTTGAGT--CTGCTG-TAATT  85

seq1  TATTTTATCTCCATCTCAGGGAATGTAACAGTCAACTCAGAATCATGGCT  150
      |||||| ||| |||||||||| ||||||||||| |||||| |||||||| 
seq2  TATTTT-TCT-CATCTCAGGG-ATGTAACAGTC-ACTCAG-ATCATGGC-  129

seq1  TCTTTCTTTCTCAGAAAATAGCTTAAGTCCATGGGAAATCAACACAATGC  200
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTC-TTCTCAGAAAATAGCTTAAGTCCATGGGAAATCAACACAATGC  178

seq1  AATGCTGAGACTGGAGACTCTCATTACATAGTGCACCTTAATCTAGTTAA  250
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AATGCTGAGACTGGAGACTCTCATTACATAGTGCACCTTAATCTAG-TAA  227

seq1  GTAATCTAACAATTTCTATTGTGTCGGGCTAAAGTGTCACTCAGCTGGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATCTAACAATTTCTATTGTGTCGGGCTAAAGTGTCACTCAGCTGGTG  277

seq1  ACACATGGTCCTTTGGTGAGTTATTGTGGGGCATGAGCATCCAAATAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGGTCCTTTGGTGAGTTATTGTGGGGCATGAGCATCCAAATAATC  327

seq1  TTTTCCTAACAATCTACATAAACCATGTGTACTATTATAGAATTTTAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTAACAATCTACATAAACCATGTGTACTATTATAGAATTTTAGAA  377

seq1  ATAGTGACTACATTGTGGTGATAATGAACATTTTCCTGAGAATTTCTGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTGACTACATTGTGGTGATAATGAACATTTTCCTGAGAATTTCTGCA  427

seq1  CAGACACTGATGCGTTTCAGAAAGAGAATTAATAGTGTTTCATGCTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACACTGATGCGTTTCAGAAAGAGAATTAATAGTGTTTCATGCTTTCC  477

seq1  ATCTGCTAACAGAAGATTAAAAAAACATTTATGAGAGAGAGACAGACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTAACAGAAGATTAAAAAAACATTTATGAGAGAGAGACAGACAGA  527

seq1  CAGACAGACAGAGAATAAAATAAGGAATCCAGTCCACCAATGCACATTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACAGACAGAGAATAAAATAAGGAATCCAGTCCACCAATGCACATTTC  577

seq1  TAATCTTTTAAAGCTGACCAGTGTTTACTACACATGGAATCTTTATAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCTTTTAAAGCTGACCAGTGTTTACTACACATGGAATCTTTATAACA  627

seq1  CTGAAGATCTATGTAATAGACAGAACACATAATCGTTATGTAAAATATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGATCTATGTAATAGACAGAACACATAATCGTTATGTAAAATATTA  677

seq1  TATTGCACCTCTATGTGAATGGCTTCATTCTGTTACTAGATGGGTGACTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCACCTCTATGTGAATGGCTTCATTCTGTTACTAGATGGGTGACTG  727

seq1  CAGAGGATAGCCACATGATGCACCTAACTTCCTCCACAAGAGGCTTCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGATAGCCACATGATGCACCTAACTTCCTCCACAAGAGGCTTCTCA  777

seq1  GCGCAGGCACTTTTGCACTTCAATGAACATTTTACTATGTATTCACATTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCAGGCACTTTTGCACTTCAATGAACATTTTACTATGTATTCACATTG  827

seq1  GGCTCCAAAGTATTTGCAGCTTTAGTCTGAAACAGCTCAAAATGATGAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCAAAGTATTTGCAGCTTTAGTCTGAAACAGCTCAAAATGATGAAT  877

seq1  GTGAAATTTTACTTGAAGAAAATTACTTTAAGATTTGAGACAGTGGCTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAATTTTACTTGAAGAAAATTACTTTAAGATTTGAGACAGTGGCTTA  927

seq1  TCCTTTTCAGCCTATTCTGATACTTCCATCTTTCTGAAAAGCCTTCATAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTTTCAGCCTATTCTGATACTTCCATCTTTCTGAAAAGCCTTCATAT  977

seq1  CTGTATGTGGACATATATTTGTCTATATACAGTACATGAGACACCATTCT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGTGGACATATATTTGTCTATATACAGTACATGAGACACCATTCT  1027

seq1  CCTTTCATGGGTCATTATGAAAATAGAACTTTCTGGTATGAATCTCAAGT  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCATGGGTCATTATGAAAATAGAACTTTCTGGTATGAATCTCAAGT  1077

seq1  GGAATTC  1107
      |||||||
seq2  GGAATTC  1084