BAC Information

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BAC

Clone NameB6Ng01-128B11
Chromosome17 (Build37)18 (Build37)
Map Location 61,853,686 - 61,853,96887,129,721 - 87,130,764
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC433129, EG620725
Downstream geneLOC100043560
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128B11.bB6Ng01-128B11.g
ACCDH930035DH930036
length2561,032
definitionDH930035|Mus musculus domesticus DNA, BAC clone: B6Ng01-128B11, 5' end.DH930036|Mus musculus domesticus DNA, BAC clone: B6Ng01-128B11, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(61,853,686 - 61,853,968)(87,129,721 - 87,130,764)
sequence
cagttcaaactggaatcagtatggaggttttatggaaaaaaatagaaatg
gatttacaaaatgacaaaggcatctacacaaaggatttcaaatcctgctg
cagaaacacctgtgtacttgtgttcattgttattctatttacaatagcga
agaaatttaaccaaactaaatgttcatcaaccagggaatagattacaaat
atgatatatgtatatgtatatgtatatgcatatgtgtgtgtgtgtgtgtg
tgtgtg
gaattcctaccccataggaaaaacactatcaactaaccagactacccaga
gctcccagtaactaaaccaccaaccaaagaatatatatgaagagatacat
ggctccagagaaagtggcaggtggcagagagagcaagctagacatgggtg
aagacagaacaagacagagaatgaggaggagcaagaagattaggccagga
agagcaattcattaattgagaagttgagagaagccagattaaagcagtca
tcatggaagatgacattttatgaagggtagaagtttccaggcctgggcca
agggatagaggaggaaccactttgtctcagcccaaaccatatcttcagat
agctcgtgtatgacaatcatctcatcctaccatctaaggaaataaaaatg
aaatttacatttaatggcaatgcactgccttgaagccaagacttgttgta
tagaatagcaaatatcaattttgagaaaactctgcaaaataaaatattat
cttactatcctgatgaataaagggaatattttaagaacgatttagtaagc
agagcatagagctacttgatgtacccaagtatgaaaattacagcagttac
atggtgttcattaaatacaacaacactcaaagcaatcaacacattattag
gttaaaaaataagaaagagagagagacagagagagagagagagagataga
gagagagagagaaagagagagacagagagagagacagagagagagacaga
gagagacagagagagactgagagactagagactgagagacggagagacag
agagagaaagtgagaaatgattggtggcttcctgaactaagggaactttc
ccagatgtttccaagcaagttatgtaatgtggttatatgtagtggcaaaa
tgcactaaaataacccagaaagaaaaccccaaattaagaaaatataacaa
atgatggtcatttgaaagtaaggacaagaatgaacaaatacaatacaaat
cataacgtgataagcagaaacattattttttc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_61853686_61853968
seq2: B6Ng01-128B11.b_252_309 (reverse)

seq1  CACACACACACACACACACACATATATATATATATATATATGTATATATA  50
      |||||||||||||||||||||| ||||  ||||| |||||  |||| |||
seq2  CACACACACACACACACACACACATATGCATATACATATACATATACATA  50

seq1  TAT-ATATATATATATATATAATACTGTATATAGTATAGTTGTACCATCT  99
      ||| ||||                                          
seq2  TATCATAT------------------------------------------  58

seq1  TTTAGAGACAAAATTATATATTGTAGTTGTATGCATATTAAACTAGAATT  149
                                                        
seq2  --------------------------------------------------  58

seq1  TTTTAAAAAAACAAACTGTAATTATATACATATATGCACACACACACATC  199
                                                        
seq2  --------------------------------------------------  58

seq1  TTATACTTTTTGTTAGGGATTTTATGTGCACATATGCATACATATGCATA  249
                                                        
seq2  --------------------------------------------------  58

seq1  TATATGTTGTACATATATATGTACATATACATAT  283
                                        
seq2  ----------------------------------  58

seq1: chr18_87129721_87130764
seq2: B6Ng01-128B11.g_67_1098 (reverse)

seq1  GAAAAAATAATGTTTCCTTGCTTATCACGTTATGGAATTTGTAATTTGTA  50
      ||||||||||||||||  ||||||||||||||||  |||||||  |||| 
seq2  GAAAAAATAATGTTTC--TGCTTATCACGTTATG--ATTTGTA--TTGT-  43

seq1  ATTTGTTCAATTCTTGTCTGTACTTTCAAATGACCATCAATTTTGTTATA  100
      |||||||| |||||||||  |||||||||||||||||||  |||||||||
seq2  ATTTGTTC-ATTCTTGTCCTTACTTTCAAATGACCATCA--TTTGTTATA  90

seq1  TTTTCTTAATTTGGGGTTATCCTTTCTGGG-TATTTTAGTGCAATTTTGC  149
      |||||||||||||||||| | ||||||||| |||||||||||| |||  |
seq2  TTTTCTTAATTTGGGGTT-TTCTTTCTGGGTTATTTTAGTGCATTTTGCC  139

seq1  ACTACATATAAAACACAAATACATAACTTGCTTGGAAACATCTGGGAAAG  199
      ||||||||| || ||| | |||||||||||||||||||||||||||||||
seq2  ACTACATAT-AACCAC-ATTACATAACTTGCTTGGAAACATCTGGGAAAG  187

seq1  TTTCCTTAGTTCAGGAAGCCACCAATCATTTCTCACTTTCTCTCTCTGTC  249
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTAGTTCAGGAAGCCACCAATCATTTCTCACTTTCTCTCTCTGTC  237

seq1  TCTCTGTCTCTCTGTCTCTCTGTCTCTCTGTCTCTCTCTGTCTCTCTCTG  299
      |||| ||||||| ||||||  ||||||| |||||||||||||||||||||
seq2  TCTCCGTCTCTCAGTCTCT-AGTCTCTCAGTCTCTCTCTGTCTCTCTCTG  286

seq1  TCTCTCTCTCTGTCTCTCTCTCTGTCTCTCTCTTTCTCTCTCTCTCTCTA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTGTCTCTCTCTCTGTCTCTCTCTTTCTCTCTCTCTCTCTA  336

seq1  TCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTTTCTTA-TTTTTAACCTAA  398
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTGTCTCTCTCTCTTTCTTATTTTTTAACCTAA  386

seq1  TAATGTGTTGATTGCTTTGAGTGTTGTTGTATTTAATGAACACCATGTAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGTGTTGATTGCTTTGAGTGTTGTTGTATTTAATGAACACCATGTAA  436

seq1  CTGCTGTAATTTTCATACTTGGGTACATCAAGTAGCTCTATGCTCTGCTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTGTAATTTTCATACTTGGGTACATCAAGTAGCTCTATGCTCTGCTT  486

seq1  ACTAAATCGTTCTTAAAATATTCCCTTTATTCATCAGGATAGTAAGATAA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAATCGTTCTTAAAATATTCCCTTTATTCATCAGGATAGTAAGATAA  536

seq1  TATTTTATTTTGCAGAGTTTTCTCAAAATTGATATTTGCTATTCTATACA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTTTGCAGAGTTTTCTCAAAATTGATATTTGCTATTCTATACA  586

seq1  ACAAGTCTTGGCTTCAAGGCAGTGCATTGCCATTAAATGTAAATTTCATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTCTTGGCTTCAAGGCAGTGCATTGCCATTAAATGTAAATTTCATT  636

seq1  TTTATTTCCTTAGATGGTAGGATGAGATGATTGTCATACACGAGCTATCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCCTTAGATGGTAGGATGAGATGATTGTCATACACGAGCTATCT  686

seq1  GAAGATATGGTTTGGGCTGAGACAAAGTGGTTCCTCCTCTATCCCTTGGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATATGGTTTGGGCTGAGACAAAGTGGTTCCTCCTCTATCCCTTGGC  736

seq1  CCAGGCCTGGAAACTTCTACCCTTCATAAAATGTCATCTTCCATGATGAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGCCTGGAAACTTCTACCCTTCATAAAATGTCATCTTCCATGATGAC  786

seq1  TGCTTTAATCTGGCTTCTCTCAACTTCTCAATTAATGAATTGCTCTTCCT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTAATCTGGCTTCTCTCAACTTCTCAATTAATGAATTGCTCTTCCT  836

seq1  GGCCTAATCTTCTTGCTCCTCCTCATTCTCTGTCTTGTTCTGTCTTCACC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAATCTTCTTGCTCCTCCTCATTCTCTGTCTTGTTCTGTCTTCACC  886

seq1  CATGTCTAGCTTGCTCTCTCTGCCACCTGCCACTTTCTCTGGAGCCATGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTCTAGCTTGCTCTCTCTGCCACCTGCCACTTTCTCTGGAGCCATGT  936

seq1  ATCTCTTCATATATATTCTTTGGTTGGTGGTTTAGTTACTGGGAGCTCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTTCATATATATTCTTTGGTTGGTGGTTTAGTTACTGGGAGCTCTG  986

seq1  GGTAGTCTGGTTAGTTGATAGTGTTTTTCCTATGGGGTAGGAATTC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTCTGGTTAGTTGATAGTGTTTTTCCTATGGGGTAGGAATTC  1032