BAC Information

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BAC

Clone NameB6Ng01-128L15
Chromosome17 (Build37)
Map Location 22,130,121 - 22,282,297
singlet/doubletdoublet
Overlap gene4930432O21Rik, LOC674332, LOC631010, EG665844, EG210853
Upstream geneV1rf5, Zfp160, LOC627912, LOC435509, EG627924, 4933430A09, EG665654, EG665662, LOC665666, EG665669, V1rf1, V1rf2, V1rf4, V1rf3, A830058L05Rik, Zfp54, Zfp51, Zfp53, LOC100042508, Zfp52, BC049807, Zfp760, BC043476, 4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, LOC665820, LOC665825
Downstream geneLOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185, ENSMUSG00000046088, EG383218, EG433078, LOC100042679, A630033E08Rik, LOC671128, LOC665961, EG434701, LOC665976, LOC100042225, LOC100042234, EG665988
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128L15.bB6Ng01-128L15.g
ACCDH930500DH930501
length1,2351,011
definitionDH930500|Mus musculus domesticus DNA, BAC clone: B6Ng01-128L15, 5' end.DH930501|Mus musculus domesticus DNA, BAC clone: B6Ng01-128L15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,130,121 - 22,131,021)(22,281,280 - 22,282,297)
sequence
gaattcatacaggagagaaaccttacaaatgtactgaatgcaccaaatgc
tttacacgcaaaggagatcttattattcatcatagaattcatacaggaga
gaaaccttacaaatgtaatgaatgtgaaaaatgctttactgtcaaaagtg
accttggaattcatcaacggattcatacaggagggaaaccttacaaatgt
agtgaatgtgttaaatcttttacacagaaaggcaatcttagaagacatca
gagaatacatacaggagagaaaccttacaaatgtagtgaatgtaacaaat
gtttcacccagaaagacattcttagaagacatcagagaattcatacagga
gagaaaccttacaaatgtagtgaatgtgacaaatgtttcactcagaaagg
cgaccttagaagacatcagagaattcatacaggagagaaaccttataagt
gtagtgaatgtgacaaatgttttgccctgaaaagtgagcttagaattcat
cagcgaattcatataggaggtaaattatacaattgtagtgaatgcgacaa
atgttttacccaaaaatgcagtcttggtattcatcagagaacacatgcag
cagagaaactgtataaatatggtgaatgtgataaattcctaaccccgaaa
tgtaatcttaacattcatcattaacattcatacagtagagaaacactaca
aattaggtgaatgatacaaatctgttacaaagaaaaatcattttagaagt
catcagagagtatgtacaggagagagaccttacaaatgtagtaaatgggc
aaatccttcactgttgacttatctcttagaagacatcagagaacacatag
aggagagaaaccatgcagaaactctgtatgaggaaattcttttccagaat
ctcagtctgaaaaagtatcttgtattcatggtggggaaaagtttccactt
tgaaagtctggtatatgctttatgcagcgtatttttgtgcacttcagctc
tgcactagagaattgttatgaatataagaaacttgtaaaaccattatgta
atgttcaaacttataactatcaatcacgtatgctacaagatctcttgaaa
tgtgaaaggaagaatttttctttaatttttacttgcccacctcttccaaa
tagtcataataaaatccagtgggaagccggaaatgtattctatagaagtc
ctggactggaatccttacaaggaattacccactga
gaattcatacaagagagaagccttacaaatataatgaatgtgacaaatgc
ttcagccaaaaacaatctcagctcttatcagagaatgcctacagtagaca
ctttcacaaatgaagtgaatgagaaaaacccgtttccaaggaagatcatc
ttagaattcatcagagactatatataggagaaggaaattataaatgtact
aaatgttcaaatccttcagtgttggttcaccatttaaaatacatcaaaga
atgcattcaggattaaaaaaaaacttatgaatttgatatatgaggaaagg
tctttacccaaatctcagacctaagaaaatacctggttatttatattcag
aaaaaagtgtccactggaaaactatggcatgtgctttattccagcagtat
tgttggcaacacttgaagctccacgctagagaatattatatattcgagga
agttggaaaaacattgaaataatcctcaaatcttaggagcgacccagggt
ttatgctcagagaaactgaaaatgcagcaatgaaggaaatctttcattaa
aagtttttacttgttcacttttaaatatgtcatgatggagaagctaaaag
aatatggagttgtataatttttcctggagactgaaatgatctatttcaaa
gagaagctgtgaaatacatgcctcaaaacagctaatgaaactgacagcat
tctgtatttttaactcaaatgaacatactccaattatacttcttaaaaga
agatttgacaaactgagccacatatataagatgctgcttatcctgttcag
atgcctacagataatcggtttgcttccaatgtccactacttattatctgt
ttcttatgctggttttaagtttcagatagcaattgtctttcagtcccttg
tgctctcatttactaactgcttccctaagtgctgtatgtaactacataaa
tctcactggtttacagttgaacttggctgttccattttacagttgggata
gtagatgaatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_22130121_22131021
seq2: B6Ng01-128L15.b_418_1283

seq1  GTGAATGTGACAAATGTTTCACTCAGAAAGGCGACCTTAGAAGACATCAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGTGACAAATGTTTCACTCAGAAAGGCGACCTTAGAAGACATCAG  50

seq1  AGAATTCATACAGGAGAGAAACCTTATAAGTGTAGTGAATGTGACAAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTCATACAGGAGAGAAACCTTATAAGTGTAGTGAATGTGACAAATG  100

seq1  TTTTGCCCTGAAAAGTGAGCTTAGAATTCATCAGCGAATTCATATAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGCCCTGAAAAGTGAGCTTAGAATTCATCAGCGAATTCATATAGGAG  150

seq1  GTAAATTATACAATTGTAGTGAATGCGACAAATGTTTTACCCAAAAATGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATTATACAATTGTAGTGAATGCGACAAATGTTTTACCCAAAAATGC  200

seq1  AGTCTTGGTATTCATCAGAGAACACATGCAGCAGAGAAACTGTATAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTGGTATTCATCAGAGAACACATGCAGCAGAGAAACTGTATAAATA  250

seq1  TGGTGAATGTGATAAATTCCTAACCCCGAAATGTAATCTTAACATTCATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAATGTGATAAATTCCTAACCCCGAAATGTAATCTTAACATTCATC  300

seq1  ATTAACATTCATACAGTAGAGAAACACTACAAATTAGGTGAATGATACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACATTCATACAGTAGAGAAACACTACAAATTAGGTGAATGATACAA  350

seq1  ATCTGTTACAAAGAAAAATCATTTTAGAAGTCATCAGAGAGTATGTACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTTACAAAGAAAAATCATTTTAGAAGTCATCAGAGAGTATGTACAG  400

seq1  GAGAGAGACCTTACAAATGTAGTAAATGGGCAAATCCTTCACTGTTGACT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGACCTTACAAATGTAGTAAATGGGCAAATCCTTCACTGTTGACT  450

seq1  TATCTCTTAGAAGACATCAGAGAACACATAGAGGAGAGAAACCATGCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTTAGAAGACATCAGAGAACACATAGAGGAGAGAAACCATGCAGA  500

seq1  AACTCTGTATGAGGAAAATTCTTTTCCAGAATCTCAGGTCTGAAAAAAGT  550
      |||||||||||||| ||||||||||||||||||||| ||||| |||||||
seq2  AACTCTGTATGAGG-AAATTCTTTTCCAGAATCTCA-GTCTG-AAAAAGT  547

seq1  ATCTTGTATTCATGGTGGGGAAAAAGTTTCCACTTTGAAAAGTCTGGTAT  600
      |||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  ATCTTGTATTCATGGTGGGG-AAAAGTTTCCACTTTG-AAAGTCTGGTAT  595

seq1  ATGCTTTATGCAAGCGGTATTTTTGTGGCACTTCAGGCTCTGCACTAGAG  650
      ||||||||||| ||| |||||||||| |||||||| ||||||||||||||
seq2  ATGCTTTATGC-AGC-GTATTTTTGT-GCACTTCA-GCTCTGCACTAGAG  641

seq1  AATTGTTATGAATATAAGAAACTTGTAAAAACCATTATGTAAATGTTCAA  700
      |||||||||||||||||||||||||| ||||||||||||| ||||||| |
seq2  AATTGTTATGAATATAAGAAACTTGT-AAAACCATTATGT-AATGTTC-A  688

seq1  AACTTATAACTATCAATCACGTATGCTAACAGAATCTCTTGAAATGTGAC  750
      ||||||||||||||||||||||||||| |||  |||||||||||||||  
seq2  AACTTATAACTATCAATCACGTATGCT-ACAAGATCTCTTGAAATGTG--  735

seq1  AATGAAAGAATTTTTTCTTTAAATTTTTTTACTTGCTCA-CTCTT-CAAA  798
      || | ||||| |||||||||||   ||||||||||| || ||||| ||||
seq2  AAAGGAAGAA-TTTTTCTTTAA---TTTTTACTTGCCCACCTCTTCCAAA  781

seq1  TAGTTCATAATAAAATTCAAGTGGGGAAGCCAGAAAAAATGTGATATTCT  848
      ||| ||||||||||| || ||| |||||||| ||||     || ||||||
seq2  TAG-TCATAATAAAA-TCCAGT-GGGAAGCCGGAAA-----TG-TATTCT  822

seq1  ATGACAGTTCCTTGGAAACTGAAATATCCATTACAAAGGGAATTACCCAC  898
      ||   |||  | |||  |||| |||   | ||||||  ||||||||||||
seq2  ATAGAAGT--CCTGG--ACTGGAAT---CCTTACAA--GGAATTACCCAC  863

seq1  TGA  901
      |||
seq2  TGA  866

seq1: chr17_22281280_22282297
seq2: B6Ng01-128L15.g_66_1076 (reverse)

seq1  CATTCATCTACCTATCCCAACTGTAAAATGGAAACAGCCAAGTTCAACTT  50
      |||||||||| |||||||||||||||||||| ||||||||||||||||| 
seq2  CATTCATCTA-CTATCCCAACTGTAAAATGG-AACAGCCAAGTTCAACT-  47

seq1  GTTAAACCAGTGAGATTTATTGTAGTTACATACAGCACTTAGGGGAAGCA  100
        ||||||||||||||||| ||||||||||||||||||||| ||||||||
seq2  -GTAAACCAGTGAGATTTA-TGTAGTTACATACAGCACTTA-GGGAAGCA  94

seq1  GTTAGTAAATGAGAGCACAAGGGACTGAAAGACAATTGCTATCCTGAAAC  150
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  GTTAGTAAATGAGAGCACAAGGGACTGAAAGACAATTGCTAT-CTGAAAC  143

seq1  TTAAAACCAGCATAAGAAACAGATAATAAGTAGTGGACATTGGAAGCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAACCAGCATAAGAAACAGATAATAAGTAGTGGACATTGGAAGCAAA  193

seq1  CCGATTATCTGTAGGCATCTGAACAGGATAAGCAGCATCTTATATATGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGATTATCTGTAGGCATCTGAACAGGATAAGCAGCATCTTATATATGTG  243

seq1  GCTCAGTTTGTCAAATCTTCTTTTAAGAAGTATAATTGGAGTATGTTCAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGTTTGTCAAATCTTCTTTTAAGAAGTATAATTGGAGTATGTTCAT  293

seq1  TTGAGTTAAAAATACAGAATGCTGTCAGTTTCATTAGCTGTTTTGAGGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTAAAAATACAGAATGCTGTCAGTTTCATTAGCTGTTTTGAGGCA  343

seq1  TGTATTTCACAGCTTCTCTTTGAAATAGATCATTTCAGTCTCCAGGAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTCACAGCTTCTCTTTGAAATAGATCATTTCAGTCTCCAGGAAAA  393

seq1  ATTATACAACTCCATATTCTTTTAGCTTCTCCATCATGACATATTTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATACAACTCCATATTCTTTTAGCTTCTCCATCATGACATATTTAAAA  443

seq1  GTGAACAAGTAAAAACTTTTAATGAAAGATTTCCTTCATTGCTGCATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAACAAGTAAAAACTTTTAATGAAAGATTTCCTTCATTGCTGCATTTT  493

seq1  CAGTTTCTCTGAGCATAAACCCTGGGTCGCTCCTAAGATTTGAGGATTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTCTCTGAGCATAAACCCTGGGTCGCTCCTAAGATTTGAGGATTAT  543

seq1  TTCAATGTTTTTCCAACTTCCTCGAATATATAATATTCTCTAGCGTGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGTTTTTCCAACTTCCTCGAATATATAATATTCTCTAGCGTGGAG  593

seq1  CTTCAAGTGTTGCCAACAATACTGCTGGAATAAAGCACATGCCATAGTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAGTGTTGCCAACAATACTGCTGGAATAAAGCACATGCCATAGTTT  643

seq1  TCCAGTGGACACTTTTTTCTGAATATAAATAACCAGGTATTTTCTTAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGTGGACACTTTTTTCTGAATATAAATAACCAGGTATTTTCTTAGGT  693

seq1  CTGAGATTTGGGTAAAGACCTTTCCTCATATATCAAATTCATAAGTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATTTGGGTAAAGACCTTTCCTCATATATCAAATTCATAAGTTTTT  743

seq1  TTTTAATCCTGAATGCATTCTTTGATGTATTTTAAATGGTGAACCAACAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATCCTGAATGCATTCTTTGATGTATTTTAAATGGTGAACCAACAC  793

seq1  TGAAGGATTTGAACATTTAGTACATTTATAATTTCCTTCTCCTATATATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGATTTGAACATTTAGTACATTTATAATTTCCTTCTCCTATATATA  843

seq1  GTCTCTGATGAATTCTAAGATGATCTTCCTTGGAAACGGGTTTTTCTCAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTGATGAATTCTAAGATGATCTTCCTTGGAAACGGGTTTTTCTCAT  893

seq1  TCACTTCATTTGTGAAAGTGTCTACTGTAGGCATTCTCTGATAAGAGCTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTTCATTTGTGAAAGTGTCTACTGTAGGCATTCTCTGATAAGAGCTG  943

seq1  AGATTGTTTTTGGCTGAAGCATTTGTCACATTCATTATATTTGTAAGGCT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTGTTTTTGGCTGAAGCATTTGTCACATTCATTATATTTGTAAGGCT  993

seq1  TCTCTCTTGTATGAATTC  1018
      ||||||||||||||||||
seq2  TCTCTCTTGTATGAATTC  1011