BAC Information

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BAC

Clone NameB6Ng01-128O09
Chromosome17 (Build37)
Map Location 82,719,319 - 82,899,363
singlet/doubletdoublet
Overlap geneLOC668836, EG433141
Upstream geneLOC100043704, Slc8a1, EG668832, LOC100043707, LOC625467
Downstream geneEG625514, LOC100043711, LOC100043900, AW548124, EG545226, Eml4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128O09.bB6Ng01-128O09.g
ACCDH930629DH930630
length1,1181,135
definitionDH930629|Mus musculus domesticus DNA, BAC clone: B6Ng01-128O09, 5' end.DH930630|Mus musculus domesticus DNA, BAC clone: B6Ng01-128O09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(82,898,230 - 82,899,363)(82,719,319 - 82,720,458)
sequence
gaattccccaacccacacaaaatcatcagaagtattcagtcacttccagt
tcatcgatcaccatgactgatgcatctgtattgacttcagaaactgagta
gtgactctcatagccacaaagctcggctattttaccactcctgttactga
gagatctgtggaagtgtgcagggatctagaaacatgccactgtgaaagcc
aaagtattccataaaaagcaaggctaaatcaaacaaaaataaaatagaac
aaaaaaaccctctatatatggcgggaagaataatatctgaaactcaagaa
ttgtttgggcaaacttttctcattttaacagaggggatcatttttctaga
ccacacaaatctttaaaattggaatgtttctgagtgataagtaaaagtat
taattaataaattaataattaaatgttttgttattaaagaaataatccat
tcactttacattaatcagcctgacactggattttctgttacatttttcac
cagtgatgtctcagctcatgtcacttttatgataaggagatgtcatcttc
ctagctggtttgaaaatgtacattctctcatacctatatatcttcaagtc
tagaaagtacagaggaatattaaagacaaatagcaagtaggtttgtgtgt
gtgtgtgtttccctgcagaacaaaccagacttcttcctatcctaagcaag
cattctaccagtgaggtaggtgcttttccaattttagaaatggccactta
tctacagtaatgcaaattgtgatttttattaagtaaaaatagagggttac
atttacaaactcagagcatcatcaagatgtgatgttttgaatataagtgg
tgcctataggctcatatatttgaatgtttagtcactctggaatggaactc
tctaataagagtagatgggctagaagtttggcctttatggaggacacata
tcactggtgagatttgtgattttaaagcacatgcagctctaggtctctgt
aagctatttaaaaaacaaacaaaacctagtttataaggcacttaaatttt
taaccaccttctattccaccactgatcaaaatgtgaaaaaaaaggttaat
aaggccaagaagatgtga
gaattccttttaatttaattaagctataatttggttagtatccagcctcc
actcattactagatgtgaatattaaataggttgcttaataatcatgtgtc
ttgagtttcccacttaactgggaatattgatataaatgtcatataattgt
tatgaatgtggagaaaattattacatctctagtgaatcatttatcatagc
atctgaaattcaagaaattcaaaagtattttgttatcaatattttataga
aagcttaatgcatttcaatacatcaccatactttctgcatactgaaagca
ctttaaaatttaatattgttcaatatatcagatattttaagacattttga
tgggttgatttactttctacatttattaaaaaatacccttttggtttcga
tgttggacttcttcaaaaatgttcattgagatatagaagtcagacaaatt
tatttatttggatcagctgtcttctatgagatggtttaatgacacccttc
tatgtcagcagaacacaactgagcatttaacttagacatctctcatgcca
gtgattacattcagtacttcactgtatctattggttattttatgatttac
attgcatcatagattcctataatgtatagctggtactgatccatgccagc
atgccagtctaacattagaatctattggaggtcaaaggacagtgtggcta
aagagttaccaccaattttgatctaagtaagaagttttctttagaaacag
ctattacacaaatgaagcatgtttttaactcttgttttgtggcattgtgc
taaagggaaccaattggctttcagaaatgatgacatatgaaaagactcta
ttcttgcatgagtcagtgttcttcatatttcttggttctcaaatgtgtag
tcatgcgtgtgtaaaaggtatatatgagtatctatcaatatcataattac
atgaagacgctgtattgcatttgattctgtgcgttatatgaagttattaa
ctacaacatcaaattagggccttttagtttctcatagaatatactacagt
cactaccattgtgctagagcatcttatcttgacttgcttgtgtaagatat
ggcataactccttggttttgacatgtgttggaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_82898230_82899363
seq2: B6Ng01-128O09.b_47_1164 (reverse)

seq1  TCACATCTTCTTTTGCCCTATTAACCTTTCTTTTCTACTATTTTTGGTCA  50
      |||||||||| || ||| ||||||||||| ||||| ||   ||||| |||
seq2  TCACATCTTC-TTGGCCTTATTAACCTTTTTTTTC-AC--ATTTTGATCA  46

seq1  GTGGTGGATTAGAAGGTTGGTTAAAATATTTAAGTGCCCTTATTAAACTA  100
      |||||||| ||||||| ||||||||| ||||||||| ||||| |||||||
seq2  GTGGTGGAATAGAAGG-TGGTTAAAA-ATTTAAGTG-CCTTA-TAAACTA  92

seq1  GGTTTTGTTTTGTTTTTTAATATAAGCCTACAGAGAACCTAGAGCTTGCA  150
      ||||||| |||||||||||| || ||| ||||||| ||||||||| ||||
seq2  GGTTTTG-TTTGTTTTTTAA-AT-AGCTTACAGAG-ACCTAGAGC-TGCA  137

seq1  TGTGCTTTTAAAATCACAAATCTCACCAGTGATATGTGTCCTCCATAAAG  200
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGC-TTTAAAATCACAAATCTCACCAGTGATATGTGTCCTCCATAAAG  186

seq1  GCCAAACTTCCTAGCCCATCTACTCTTATTAGAGAGTTCCATTCCAGAGT  250
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCCAAACTT-CTAGCCCATCTACTCTTATTAGAGAGTTCCATTCCAGAGT  235

seq1  GACTAAACATTCAAATATATGAGCCTATAGGCACCACTTATATTCAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTAAACATTCAAATATATGAGCCTATAGGCACCACTTATATTCAAAAC  285

seq1  ATCACATCTTGATGATGCTCTGAGTTTGTAAATGTAACCCTCTATTTTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACATCTTGATGATGCTCTGAGTTTGTAAATGTAACCCTCTATTTTTA  335

seq1  CTTTAATAAAAATCACAATTTGCATTACTGTAGATAAGTGGCCATTTCTA  400
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  C-TTAATAAAAATCACAATTTGCATTACTGTAGATAAGTGGCCATTTCTA  384

seq1  AAATTGGAAAAGCACCTACCTCACTGGTAGAATGCTTGCTTAGGATAGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGGAAAAGCACCTACCTCACTGGTAGAATGCTTGCTTAGGATAGGA  434

seq1  AGAAGTCTGGTTTGTTCTGCAGGGAAACACACACACACACAAACCTACTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCTGGTTTGTTCTGCAGGGAAACACACACACACACAAACCTACTT  484

seq1  GCTATTTGTCTTTAATATTCCTCTGTACTTTCTAGACTTGAAGATATATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATTTGTCTTTAATATTCCTCTGTACTTTCTAGACTTGAAGATATATA  534

seq1  GGTATGAGAGAATGTACATTTTCAAACCAGCTAGGAAGATGACATCTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATGAGAGAATGTACATTTTCAAACCAGCTAGGAAGATGACATCTCCT  584

seq1  TATCATAAAAGTGACATGAGCTGAGACATCACTGGTGAAAAATGTAACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATAAAAGTGACATGAGCTGAGACATCACTGGTGAAAAATGTAACAG  634

seq1  AAAATCCAGTGTCAGGCTGATTAATGTAAAGTGAATGGATTATTTCTTTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATCCAGTGTCAGGCTGATTAATGTAAAGTGAATGGATTATTTCTTTA  684

seq1  ATAACAAAACATTTAATTATTAATTTATTAATTAATACTTTTACTTATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAAAACATTTAATTATTAATTTATTAATTAATACTTTTACTTATCA  734

seq1  CTCAGAAACATTCCAATTTTAAAGATTTGTGTGGTCTAGAAAAATGATCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGAAACATTCCAATTTTAAAGATTTGTGTGGTCTAGAAAAATGATCC  784

seq1  CCTCTGTTAAAATGAGAAAAGTTTGCCCAAACAATTCTTGAGTTTCAGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGTTAAAATGAGAAAAGTTTGCCCAAACAATTCTTGAGTTTCAGAT  834

seq1  ATTATTCTTCCCGCCATATATAGAGGGTTTTTTTGTTCTATTTTATTTTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCTTCCCGCCATATATAGAGGGTTTTTTTGTTCTATTTTATTTTT  884

seq1  GTTTGATTTAGCCTTGCTTTTTATGGAATACTTTGGCTTTCACAGTGGCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGATTTAGCCTTGCTTTTTATGGAATACTTTGGCTTTCACAGTGGCA  934

seq1  TGTTTCTAGATCCCTGCACACTTCCACAGATCTCTCAGTAACAGGAGTGG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTAGATCCCTGCACACTTCCACAGATCTCTCAGTAACAGGAGTGG  984

seq1  TAAAATAGCCGAGCTTTGTGGCTATGAGAGTCACTACTCAGTTTCTGAAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATAGCCGAGCTTTGTGGCTATGAGAGTCACTACTCAGTTTCTGAAG  1034

seq1  TCAATACAGATGCATCAGTCATGGTGATCGATGAACTGGAAGTGACTGAA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACAGATGCATCAGTCATGGTGATCGATGAACTGGAAGTGACTGAA  1084

seq1  TACTTCTGATGATTTTGTGTGGGTTGGGGAATTC  1134
      ||||||||||||||||||||||||||||||||||
seq2  TACTTCTGATGATTTTGTGTGGGTTGGGGAATTC  1118

seq1: chr17_82719319_82720458
seq2: B6Ng01-128O09.g_68_1202

seq1  GAATTCCTTTTAATTTAATTAAGCTATAATTTGGTTAGTATCCAGCCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTTAATTTAATTAAGCTATAATTTGGTTAGTATCCAGCCTCC  50

seq1  ACTCATTACTAGATGTGAATATTAAATAGGTTGCTTAATAATCATGTGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATTACTAGATGTGAATATTAAATAGGTTGCTTAATAATCATGTGTC  100

seq1  TTGAGTTTCCCACTTAACTGGGAATATTGATATAAATGTCATATAATTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTTCCCACTTAACTGGGAATATTGATATAAATGTCATATAATTGT  150

seq1  TATGAATGTGGAGAAAATTATTACATCTCTAGTGAATCATTTATCATAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAATGTGGAGAAAATTATTACATCTCTAGTGAATCATTTATCATAGC  200

seq1  ATCTGAAATTCAAGAAATTCAAAAGTATTTTGTTATCAATATTTTATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAAATTCAAGAAATTCAAAAGTATTTTGTTATCAATATTTTATAGA  250

seq1  AAGCTTAATGCATTTCAATACATCACCATACTTTCTGCATACTGAAAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTAATGCATTTCAATACATCACCATACTTTCTGCATACTGAAAGCA  300

seq1  CTTTAAAATTTAATATTGTTCAATATATCAGATATTTTAAGACATTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAAATTTAATATTGTTCAATATATCAGATATTTTAAGACATTTTGA  350

seq1  TGGGTTGATTTACTTTCTACATTTATTAAAAAATACCCTTTTGGTTTCGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTTGATTTACTTTCTACATTTATTAAAAAATACCCTTTTGGTTTCGA  400

seq1  TGTTGGACTTCTTCAAAAATGTTCATTGAGATATAGAAGTCAGACAAATT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGACTTCTTCAAAAATGTTCATTGAGATATAGAAGTCAGACAAATT  450

seq1  TATTTATTTGGATCAGCTGTCTTCTATGAGATGGTTTAATGACACCCTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTATTTGGATCAGCTGTCTTCTATGAGATGGTTTAATGACACCCTTC  500

seq1  TATGTCAGCAGAACACAACTGAGCATTTAACTTAGACATCTCTCATGCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCAGCAGAACACAACTGAGCATTTAACTTAGACATCTCTCATGCCA  550

seq1  GTGATTACATTCAGTACTTCACTGTATCTATTGGTTATTTTATGATTTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTACATTCAGTACTTCACTGTATCTATTGGTTATTTTATGATTTAC  600

seq1  ATTGCATCATAGATTCCTATAATGTATAGCTGGTACTGATCCATGCCAGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATCATAGATTCCTATAATGTATAGCTGGTACTGATCCATGCCAGC  650

seq1  ATGCCAGTCTAACATTAGAATCTATTGGAGGTCAAAGGACAGTGTGGCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCAGTCTAACATTAGAATCTATTGGAGGTCAAAGGACAGTGTGGCTA  700

seq1  AAGAGTTACCACCAATTTTGATCTAAGTAAGAAGTTTTCTTTAGAAACAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTTACCACCAATTTTGATCTAAGTAAGAAGTTTTCTTTAGAAACAG  750

seq1  CTATTACACAAATGAAGCATGTTTTTAACTCTTGTTTTGTGGCATTGTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACACAAATGAAGCATGTTTTTAACTCTTGTTTTGTGGCATTGTGC  800

seq1  TAAAGGGAACCAATTGGCTTTCAGAAATGATGACATATGAAAAGACTCTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGGAACCAATTGGCTTTCAGAAATGATGACATATGAAAAGACTCTA  850

seq1  TTCTTGCATGAGTCAGTGTTCTTCATATTTCTTGGTTCTCAAATGTGTAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGCATGAGTCAGTGTTCTTCATATTTCTTGGTTCTCAAATGTGTAG  900

seq1  TCATGCGTGTGTAAAAAGGTATATATGAGTATCTATCAAATATCATAATT  950
      |||||||||||| |||||||||||||||||||||||| ||||||||||||
seq2  TCATGCGTGTGT-AAAAGGTATATATGAGTATCTATC-AATATCATAATT  948

seq1  ACATGAAGACGCTGTATTGCATTTGATTCTGTGCGTTATATGAAGTTAAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  ACATGAAGACGCTGTATTGCATTTGATTCTGTGCGTTATATGAAGTT-AT  997

seq1  TAACTACAACATCAAATTAGGGCCTTTTAGTGTCTCATAAGAATTATACC  1050
      ||||||||||||||||||||||||||||||| |||||| |||| |||| |
seq2  TAACTACAACATCAAATTAGGGCCTTTTAGTTTCTCAT-AGAA-TATA-C  1044

seq1  TACAGTCACTACCATTGTTGCTAGAGGCATC-TATCTTGACTTGCTT-TG  1098
      ||||||||||||||||| ||||||| ||||| ||||||||||||||| ||
seq2  TACAGTCACTACCATTG-TGCTAGA-GCATCTTATCTTGACTTGCTTGTG  1092

seq1  TAAAGATATGGCATAACTC--TTGTTTTGACAAGTGTTGGAAGA  1140
      | |||||||||||||||||  | ||||||||| |||||||||||
seq2  T-AAGATATGGCATAACTCCTTGGTTTTGACATGTGTTGGAAGA  1135