BAC Information

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BAC

Clone NameB6Ng01-129A15
Chromosome17 (Build37)
Map Location 92,419,969 - 92,519,762
singlet/doubletdoublet
Overlap genenone
Upstream geneNrxn1, EG668871, LOC668872, LOC627235, LOC100043741, LOC100043742
Downstream geneEG640442, LOC627395, LOC676141, LOC668877, LOC100043746, LOC100043747, LOC100043748, LOC100043907
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129A15.bB6Ng01-129A15.g
ACCDH930730DH930731
length887785
definitionDH930730|Mus musculus domesticus DNA, BAC clone: B6Ng01-129A15, 5' end.DH930731|Mus musculus domesticus DNA, BAC clone: B6Ng01-129A15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,419,969 - 92,420,851)(92,518,972 - 92,519,762)
sequence
gaattcagactgttctttaaccagtagctctagaataataagagctcttc
agatggagataatatttcatgtgtatattctctttcacttgtgatttgtt
tgtttgtttggttgttttttttttgtttgtttttttttttgttttgtttt
gttttgttttgttttgttttttggtttttttgagacagggtttctctgta
tagccctggctgtcctggagctcactttgtagaccaggctggcctcgaac
tcagaaatctgcctgcctctgcctcccgagtgctgggattaaaggcgtgg
gccaccacgctcggcttgggatttgttttgtttcatttcgtgcaagtctt
cgctgtggtctcacataaatgtgagctgctatttgttttttctttctttc
tctctctctctctctctctctctctctctctctctctctttctttctttc
taagatttgattgtgatgttttaatattttgatatacaaaaatgcatatt
ccttattttgttttaatcaaaatatttcattatctccccttaacttttct
ccattttatatttctttaataaagaacttttatgaatatcacaaatagta
ctgaaagaacacacatttagaataaatgcaagctttgtaataaagtaatt
attatgacatcactaaacaagcactgtcttatatagagagaggttctctt
ccagttccttttgggaggtacttagagatatggggtttttcctattttct
actgctttcattggtcccataggtatttgtatgatggtgtcttcattttt
attaaatcctttaaagcctttaatttctttaattatttcttccttgacca
atgaatcaatgagtaaagtgttggtcagcctccatgt
gaattcttatttcagcaagagtctctctctctctctctctctctctctct
ctctctctctctctctctctcgaacgcggttgaaaaaaataaaggcagac
atccaagggtccccttgtgtccaggaatgagtaaacattaactcctaaac
acaccatttgacacatatttaaaataaataaataaataaattcccccaag
cacagaagatagttgttctgcttcagtctccattagattgtagcaatttc
tttttttaatctcctttacatctcaattcttcaataattgagtatttgct
gtataatgtattcttcattctatgtgtctttgtttggtttagatagttaa
tagtttcggtaatattttcctgtcaatttctaggttttattccatgagga
tctgataatacacagtaaagtatttcaaccttggtatttatcattgcctg
ctgttctatatacagatattattcttgtgattaaataccaagacaaaaag
caacatggtgaaggaagaggtgtttttcactaacacttcatcttcaaagc
aatgagggaagtcgagcaagtagacctggaatctggagggctatacagaa
acaagggaggggttgttgtttacttgatctcaacattatatctaaaagaa
cccaggctgggacccatagctgttcctactctcaatgtccggggctgtcc
cactcctacaccaattaattttttctagattgactttacctctttggaca
ttttttacttatgtcagctgaaataaaactatatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_92419969_92420851
seq2: B6Ng01-129A15.b_47_933

seq1  GAATTCAGACTGTTCTTTAACCAGTAGCTCTAGAATAATAAGAGCTCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGACTGTTCTTTAACCAGTAGCTCTAGAATAATAAGAGCTCTTC  50

seq1  AGATGGAGATAATATTTCATGTGTATATTCTCTTTCACTTGTGATTTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAGATAATATTTCATGTGTATATTCTCTTTCACTTGTGATTTGTT  100

seq1  TGTTTGTTTGGTTGTTTTTTTTTTGTTTGTTTTTTTTTTTGTTTTGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTTGGTTGTTTTTTTTTTGTTTGTTTTTTTTTTTGTTTTGTTTT  150

seq1  GTTTTGTTTTGTTTTGTTTTTTGGTTTTTTTGAGACAGGGTTTCTCTGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTTTTGTTTTGTTTTTTGGTTTTTTTGAGACAGGGTTTCTCTGTA  200

seq1  TAGCCCTGGCTGTCCTGGAGCTCACTTTGTAGACCAGGCTGGCCTCGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCTGGCTGTCCTGGAGCTCACTTTGTAGACCAGGCTGGCCTCGAAC  250

seq1  TCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAATCTGCCTGCCTCTGCCTCCCGAGTGCTGGGATTAAAGGCGTGG  300

seq1  GCCACCACGCTCGGCTTGGGATTTGTTTTGTTTCATTTCGTGCAAGTCTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCACGCTCGGCTTGGGATTTGTTTTGTTTCATTTCGTGCAAGTCTT  350

seq1  CGCTGTGGTCTCACATAAATGTGAGCTGCTATTTGTTTTTTCTTTCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||  
seq2  CGCTGTGGTCTCACATAAATGTGAGCTGCTATTTGTTTTTTCTTTCTT--  398

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTC  450
        ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  --TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTTTC  446

seq1  TTTCTAAGATTTGATTGTGATGTTTTAATATTTTGATATACAAAAATGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAAGATTTGATTGTGATGTTTTAATATTTTGATATACAAAAATGCA  496

seq1  TATTCCTTATTTTGTTTTAATCAAAATATTTCATTATCTCCCCTTAACTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCCTTATTTTGTTTTAATCAAAATATTTCATTATCTCCCCTTAACTT  546

seq1  TTCTCCATTTTATATTTCTTTAATAAAGAAC-TTTATGAATATCACAAAT  599
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TTCTCCATTTTATATTTCTTTAATAAAGAACTTTTATGAATATCACAAAT  596

seq1  AGTACTGAAAGAACACACA-TTAGAATAAATGCAAGC-TTGTAATAAAGT  647
      ||||||||||||||||||| ||||||||||||||||| ||||||||||||
seq2  AGTACTGAAAGAACACACATTTAGAATAAATGCAAGCTTTGTAATAAAGT  646

seq1  AATTATTATGACATCACT-AACAAGCACTGTCTTATATAGAGAGAGGTTC  696
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  AATTATTATGACATCACTAAACAAGCACTGTCTTATATAGAGAGAGGTTC  696

seq1  TC-TCCAGTTCCTTTTTGGAGGTACTTAGAGATATGGG--TTTTCCTA-T  742
      || ||||||||||||| |||||||||||||||||||||  |||||||| |
seq2  TCTTCCAGTTCCTTTTGGGAGGTACTTAGAGATATGGGGTTTTTCCTATT  746

seq1  TTCTACTGCTTTCATTGTGTCCCATAGGTATTTGTATGAT-GTGTCTTCA  791
      ||||||||||||||||| |||||||||||||||||||||| |||||||||
seq2  TTCTACTGCTTTCATTG-GTCCCATAGGTATTTGTATGATGGTGTCTTCA  795

seq1  TTTTTATTAAATCCTTAAAAGCCTTTAATTTCTTTAATTATTTCTTCCTT  841
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  TTTTTATTAAATCCTTTAAAGCCTTTAATTTCTTTAATTATTTCTTCCTT  845

seq1  GACCAATGTATCATTGAGTAGAGTGTTGTTCAGCTTCCATGT  883
      |||||||| |||| |||||| ||||||| ||||| |||||||
seq2  GACCAATGAATCAATGAGTAAAGTGTTGGTCAGCCTCCATGT  887

seq1: chr17_92518972_92519762
seq2: B6Ng01-129A15.g_67_850 (reverse)

seq1  ATATAGTTTTATTTCAGCTTGACATAAGCTAAAAATGTCCAAAGAGGTAA  50
      |||||||||||||||||| |||||||||  ||||||||||||||||||||
seq2  ATATAGTTTTATTTCAGC-TGACATAAGTAAAAAATGTCCAAAGAGGTAA  49

seq1  AGTCAATTTAGAAAAAAATTAATTTGTGATAGATGTGGGACAGCCCAGAC  100
      ||||||| ||| |||||||||||| ||| |||  |||||||||||| |  
seq2  AGTCAATCTAG-AAAAAATTAATTGGTG-TAGGAGTGGGACAGCCCCGGA  97

seq1  CATTGAGAGTAGGATCAGCTCTGGGTTCCTAGCCTTGGGTTCTTTTAGAT  150
      |||||||||||||| ||||| |||| ||| |||| |||||||||||||||
seq2  CATTGAGAGTAGGAACAGCTATGGG-TCCCAGCC-TGGGTTCTTTTAGAT  145

seq1  ATAATGCTGAGTATCAAGTAAACAGCAACCCCTCCATTGTTTCTGTATAG  200
      |||||| |||| |||||||||||| |||||||||| ||||||||||||||
seq2  ATAATGTTGAG-ATCAAGTAAACAACAACCCCTCCCTTGTTTCTGTATAG  194

seq1  CCCTCCAGGTTCCAGGTCTACTTGCTCGACTTCCCTCATTGCTTTTGAAG  250
      |||||||| ||||||||||||||||||||||||||||||||| |||||||
seq2  CCCTCCAGATTCCAGGTCTACTTGCTCGACTTCCCTCATTGC-TTTGAAG  243

seq1  ATGAAGTGTTAGTGAAAAACACCTCTTCCTTCACCATGTTGCTTTTTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTGTTAGTGAAAAACACCTCTTCCTTCACCATGTTGCTTTTTGTC  293

seq1  TTGGTATTTAATCACAAGAATAATAACTGTAACTAGAACAGCATGCAATG  350
      ||||||||||||||||||||||||| |||||  |||||||||| ||||||
seq2  TTGGTATTTAATCACAAGAATAATATCTGTATATAGAACAGCAGGCAATG  343

seq1  ATAAATACCAAGGTTGAAATACTTTACTGTGTATTATCAGATCCTCATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATACCAAGGTTGAAATACTTTACTGTGTATTATCAGATCCTCATGG  393

seq1  AATAAAACCTAGAAATTGACAGGAAAATATTACCGAAACTATTAACTATC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACCTAGAAATTGACAGGAAAATATTACCGAAACTATTAACTATC  443

seq1  TAAACCAAACAAAGACACATAGAATGAAGAATACATTATACAGCAAATAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCAAACAAAGACACATAGAATGAAGAATACATTATACAGCAAATAC  493

seq1  TCAATTATTGAAGAATTGAGATGTAAAGGAGATTAAAAAAAGAAATTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTATTGAAGAATTGAGATGTAAAGGAGATTAAAAAAAGAAATTGCT  543

seq1  ACAATCTAATGGAGACTGAAGCAGAACAACTATCTTCTGTGCTTGGGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATCTAATGGAGACTGAAGCAGAACAACTATCTTCTGTGCTTGGGGGA  593

seq1  ATTTATTTATTTATTTATTTTAAATATGTGTCAAATGGTGTGTTTAGGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTTATTTATTTATTTTAAATATGTGTCAAATGGTGTGTTTAGGAG  643

seq1  TTTATGTTTACTCATTCCTGGGCACAAGGGGAACATTGGATGTCTGCCTT  700
      || |||||||||||||||||| |||||||||| | |||||||||||||||
seq2  TTAATGTTTACTCATTCCTGGACACAAGGGGACCCTTGGATGTCTGCCTT  693

seq1  TATTTCTCTCAACCGCCTTCCTGAGAGAGAGAGAGAGAGAGAGAGAGAGA  750
      ||||| | |||||||| |||  ||||||||||||||||||||||||||||
seq2  TATTTTTTTCAACCGCGTTCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA  743

seq1  GAGAGAGAGAGAGAGAGAGACTCTTGCTGAAATAAGAATTC  791
      |||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGACTCTTGCTGAAATAAGAATTC  784