BAC Information

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BAC

Clone NameB6Ng01-129G16
Chromosome17 (Build37)
Map Location 84,305,624 - 84,478,691
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043711, LOC100043900, AW548124, EG545226, Eml4, Cox7a2l, Kcng3, Mta3, Haao
Downstream geneZfp36l2, Thada, Plekhh2, Dync2li1, Abcg5, Abcg8, Lrpprc, LOC668848, 1110020A21Rik, Ppm1b, Slc3a1, Prepl
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129G16.bB6Ng01-129G16.g
ACCDH931004DH931005
length2071,016
definitionDH931004|Mus musculus domesticus DNA, BAC clone: B6Ng01-129G16, 5' end.DH931005|Mus musculus domesticus DNA, BAC clone: B6Ng01-129G16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,478,481 - 84,478,691)(84,305,624 - 84,306,654)
sequence
gaattcatatctgagatccaggaaagagactctgatagtgttcactcaag
gaagtgtatggtgggaagggcagggtttaggctgggagttcagagtgggc
cagaggagcaggagctgtggccttcagagagagagagagaaagagagaga
gagagagagagagagagagagagagagagagagagaatgtgtatatgtgt
gtatgtg
gaattcataccctgatgtccattctgggatcaagctgaaggccagccctt
acggaggagtaagagtagaggggtggtagagatgagaacagcattggttc
tttctacatgtgcacgtgttctaacagcattggccaaagccagttgactg
ggcaaagcaggtgccttctccacgaggtatcccaagtccccagggtttgg
aatagggatggataaccttcttgcaggcatggagggtgtgtgtgggatac
tcacaagaacaacagcctattacagcagtgatgcctgccttccagcaggg
cttctgagcttccatgcctctctctgactttcccaatcctagagaaagaa
ggacaaggatttgtttagaggctatggcccagagaaccctgacaagactc
cggtgggatgaccagcttagcccaggtagtaaatgagaagcagctgtgtt
tcttgtcactacagagaggtctggaagacgctgtggctcccagccatggc
cagaagttagaggatcaagagctgagggactgcctgctgtctgtctcctt
gaccaatttcctgtgcagtggtagaaggagctttatctacaaagtcaagc
tgttcctcacctcacagctattttcaaagaactttgttgttttctaaaga
tattatctatctgtctgtctgtctgtctgtctgtctgcctatcatctacc
tacctatctcccagctagtatcacgatctgcagctttgactgggacttgc
tatctaggccagactagtcttgaactcataatgatcgttctgtctctgac
tcccaagtcaaagccttttttttttataagacaacttactactcgatccc
tccatgaactgacagagatagtaagacaaggactaattcgtcgctatcaa
atagagaaccaagcttggagacaaagatgcatctgagaccacgcaacagt
tgtcagcaagatcgcagagccaagtcttttctctgggctagtattctcgg
actgggctgggctgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_84478481_84478691
seq2: B6Ng01-129G16.b_44_250 (reverse)

seq1  CACATACACACATATACACATTCTCTCTCTCTCTCTCTCTCTCTCTCTCT  50
      |||||||||||||||||||||    |||||||||||||||||||||||||
seq2  CACATACACACATATACACAT----TCTCTCTCTCTCTCTCTCTCTCTCT  46

seq1  CTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTGAAGGCCACAGCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCTCTCTGAAGGCCACAGCTC  96

seq1  CTGCTCCTCTGGCCCACTCTGAACTCCCAGCCTAAACCCTGCCCTTCCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCCTCTGGCCCACTCTGAACTCCCAGCCTAAACCCTGCCCTTCCCA  146

seq1  CCATACACTTCCTTGAGTGAACACTATCAGAGTCTCTTTCCTGGATCTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATACACTTCCTTGAGTGAACACTATCAGAGTCTCTTTCCTGGATCTCA  196

seq1  GATATGAATTC  211
      |||||||||||
seq2  GATATGAATTC  207

seq1: chr17_84305624_84306654
seq2: B6Ng01-129G16.g_67_1082

seq1  GAATTCATACCCTGATGTCCATTCTGGGATCAAGCTGAAGGCCAGCCCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATACCCTGATGTCCATTCTGGGATCAAGCTGAAGGCCAGCCCTT  50

seq1  ACGGAGGAGTAAGAGTAGAGGGGTGGTAGAGATGAGAACAGCATTGGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAGGAGTAAGAGTAGAGGGGTGGTAGAGATGAGAACAGCATTGGTTC  100

seq1  TTTCTACATGTGCACGTGTTCTAACAGCATTGGCCAAAGCCAGTTGACTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACATGTGCACGTGTTCTAACAGCATTGGCCAAAGCCAGTTGACTG  150

seq1  GGCAAAGCAGGTGCCTTCTCCACGAGGTATCCCAAGTCCCCAGGGTTTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAAGCAGGTGCCTTCTCCACGAGGTATCCCAAGTCCCCAGGGTTTGG  200

seq1  AATAGGGATGGATAACCTTCTTGCAGGCATGGAGGGTGTGTGTGGGATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGGATGGATAACCTTCTTGCAGGCATGGAGGGTGTGTGTGGGATAC  250

seq1  TCACAAGAACAACAGCCTATTACAGCAGTGATGCCTGCCTTCCAGCAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAAGAACAACAGCCTATTACAGCAGTGATGCCTGCCTTCCAGCAGGG  300

seq1  CTTCTGAGCTTCCATGCCTCTCTCTGACTTTCCCAATCCTAGAGAAAGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTGAGCTTCCATGCCTCTCTCTGACTTTCCCAATCCTAGAGAAAGAA  350

seq1  GGACAAGGATTTGTTTAGAGGCTATGGCCCAGAGAACCCTGACAAGACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACAAGGATTTGTTTAGAGGCTATGGCCCAGAGAACCCTGACAAGACTC  400

seq1  CGGTGGGATGACCAGCTTAGCCCAGGTAGTAAATGAGAAGCAGCTGTGTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGGGATGACCAGCTTAGCCCAGGTAGTAAATGAGAAGCAGCTGTGTT  450

seq1  TCTTGTCACTACAGAGAGGTCTGGAAGACGCTGTGGCTCCCAGCCATGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTCACTACAGAGAGGTCTGGAAGACGCTGTGGCTCCCAGCCATGGC  500

seq1  CAGAAGTTAGAGGATCAAGAGCTGAGGGACTGCCTGCTGTCTGTCTCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGTTAGAGGATCAAGAGCTGAGGGACTGCCTGCTGTCTGTCTCCTT  550

seq1  GACCAATTTCCTGTGCAGTGGTAGAAGGAGCTTTATCTACAAAGTCAAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATTTCCTGTGCAGTGGTAGAAGGAGCTTTATCTACAAAGTCAAGC  600

seq1  TGTTCCTCACCTCACAGCTATTTTCAAAGAACTTTGTTGTTTTCTAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTCACCTCACAGCTATTTTCAAAGAACTTTGTTGTTTTCTAAAGA  650

seq1  TATTATCTATCTGTCTGTCTGTCTGTCTGTCTGTCTGCCTATCATCTACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCTATCTGTCTGTCTGTCTGTCTGTCTGTCTGCCTATCATCTACC  700

seq1  TACCTATCTCCCAGCTAGTATCACGATCTGCAGCTTTGACTGGGACTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTATCTCCCAGCTAGTATCACGATCTGCAGCTTTGACTGGGACTTGC  750

seq1  TATCTAGGCCAGACTAGTCTTGAACTCATAATGATCGTTCTGTCTCTGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAGGCCAGACTAGTCTTGAACTCATAATGATCGTTCTGTCTCTGAC  800

seq1  TCCCAAGTCAAAGCCTTTTTTTTATATAAGACAACTTACTACTCGATCCC  850
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCCCAAGTCAAAGCCTTTTTTTTTTATAAGACAACTTACTACTCGATCCC  850

seq1  TCCATGAACTGACAGAGATAGAAAGACAAGGACTAATTCGTCGCTATCAA  900
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TCCATGAACTGACAGAGATAGTAAGACAAGGACTAATTCGTCGCTATCAA  900

seq1  ATAGAGAAACCAAGGCTTGGGAGAACAAAGGATGCATCTGAGACCACGCA  950
      |||||| |||||| |||| |||| ||||| ||||||||||||||||||||
seq2  ATAGAG-AACCAA-GCTT-GGAG-ACAAA-GATGCATCTGAGACCACGCA  945

seq1  ACCAGTTGTCAGCAGAGATCGCAGGAGCCAAGTTCTTTTTCTCTGGGCTA  1000
      | |||||||||||| |||||||| |||||||||   ||||||||||||||
seq2  A-CAGTTGTCAGCA-AGATCGCA-GAGCCAAGT--CTTTTCTCTGGGCTA  990

seq1  GGTATTCTCCGTGACTTGGGCTGGGGCTGCA  1031
       ||||||||   ||| |||||| ||||||||
seq2  -GTATTCTC--GGAC-TGGGCT-GGGCTGCA  1016