BAC Information

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BAC

Clone NameB6Ng01-129I10
Chromosome17 (Build37)
Map Location 40,337,662 - 40,338,381
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043300, EG668200, LOC672857, LOC627695, LOC634967
Downstream genePgk2, Crisp3, Crisp1, LOC668229, LOC100043756, EG433107, EG619517, Crisp2, Rhag, 9130008F23Rik, EG435528, Cenpq, Mut, Ldha-ps3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129I10.bB6Ng01-129I10.g
ACCDH931084DH931085
length7201,101
definitionDH931084|Mus musculus domesticus DNA, BAC clone: B6Ng01-129I10, 5' end.DH931085|Mus musculus domesticus DNA, BAC clone: B6Ng01-129I10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgagataaaattctgcagaaggttcatggaagcacagtgttta
aggtaaagttcaatgctttcaagttctgcccccaaggactctatcaggtg
tgcacagttaaaattgaagaatatgtcctattctttgcagctgaatttag
aattaaaaaaaaataaaattaatacctaaccaatcaataagtatttctgt
ttcttttttttctttttccaattttttattaagtattttcatcatttaca
tttcaaatgttatcctgaaagtcccctataccctcctgccctgctcccct
acccatccactcccccttcttagccctggtgttcccctgtactggggcat
ataaagtttgcaagaccaaggggcctctcttccctatgatgggcgactag
gccatcttctgctacatatgcagctagagacatgagctctgggggtactt
gttacttcatattgttgttccacttatagtgttgcagaccccttcagctc
cttaggtactttctctagctcctccattgtggaccctgtgttccatccaa
agcggactgtgagcatccacttctatgtttgccaggcactggcaaagcct
tacaagagacagttatctcagggtcctttcagcaaaatcttgctcgcata
tgcaatagtgtctgtgtttgttggctgattatgggatggatccccaggtg
cggcagtccctggatggtcc
gaattctcacctgaggaatactgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattggtggga
ttgcaggcttgtacaaccactctggaaatccgtctggcggttcctcagaa
aattggacataatactactggaggatccagcaatacctctcctgggcata
tatccagaagatgccccaactggtaagaaggacacatgctccactatgtt
catagcagccttatttataatagccagaagctggaaagaacccagatgcc
cctcaacagaggaatggatacagaaaatgtggtacatctacacaatggag
tactactcagctattaaaaagaatgaatttatgaaattcctaggcaaatg
gatggacctggagggcatcatcctgagtgaggtaacacattcacaaagga
actcacacaatatgtactcactgataagtggatattcgcccagaaactta
ggatacccaagatataagatacaatttcctaaacacatgaaactcaagaa
aaatgaagactgaagtgtggacactatgcccctccttagaagtgggaaca
aaacacccttggaaggagtacagagacaaagtttggagctgagatgaaag
gatggaccatgtagagaatgccttatccagggatccaccccataatcagc
atccaaacctgacaccattgcatacactagcaagattttatcgaaaggac
ccagatgtagctgtctcttggtaagatatgcaggggcctagcaaacacag
aagtgggatactcacaggtagcttattgtgatgggatcaatagggcccca
tggaggagcttgagaagttccaaggagcctaaaggggatctgcaccccta
taggtgggtcatcattatgaactaatcagtacccagagctcttgactctg
ctgcattagtatcaaaagaaaggtctagtctggcctactctgtaaaggaa
g
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_40337662_40338381
seq2: B6Ng01-129I10.b_45_764

seq1  GAATTCCTGAGATAAAATTCTGCAGAAGGTTCATGGAAGCACAGTGTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAGATAAAATTCTGCAGAAGGTTCATGGAAGCACAGTGTTTA  50

seq1  AGGTAAAGTTCAATGCTTTCAAGTTCTGCCCCCAAGGACTCTATCAGGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAAGTTCAATGCTTTCAAGTTCTGCCCCCAAGGACTCTATCAGGTG  100

seq1  TGCACAGTTAAAATTGAAGAATATGTCCTATTCTTTGCAGCTGAATTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACAGTTAAAATTGAAGAATATGTCCTATTCTTTGCAGCTGAATTTAG  150

seq1  AATTAAAAAAAAATAAAATTAATACCTAACCAATCAATAAGTATTTCTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAAAAAAAATAAAATTAATACCTAACCAATCAATAAGTATTTCTGT  200

seq1  TTCTTTTTTTTCTTTTTCCAATTTTTTATTAAGTATTTTCATCATTTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTTTTTCTTTTTCCAATTTTTTATTAAGTATTTTCATCATTTACA  250

seq1  TTTCAAATGTTATCCTGAAAGTCCCCTATACCCTCCTGCCCTGCTCCCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAAATGTTATCCTGAAAGTCCCCTATACCCTCCTGCCCTGCTCCCCT  300

seq1  ACCCATCCACTCCCCCTTCTTAGCCCTGGTGTTCCCCTGTACTGGGGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATCCACTCCCCCTTCTTAGCCCTGGTGTTCCCCTGTACTGGGGCAT  350

seq1  ATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCCCTATGATGGGCGACTAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTTTGCAAGACCAAGGGGCCTCTCTTCCCTATGATGGGCGACTAG  400

seq1  GCCATCTTCTGCTACATATGCAGCTAGAGACATGAGCTCTGGGGGTACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTTCTGCTACATATGCAGCTAGAGACATGAGCTCTGGGGGTACTT  450

seq1  GTTACTTCATATTGTTGTTCCACTTATAGTGTTGCAGACCCCTTCAGCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTTCATATTGTTGTTCCACTTATAGTGTTGCAGACCCCTTCAGCTC  500

seq1  CTTAGGTACTTTCTCTAGCTCCTCCATTGTGGACCCTGTGTTCCATCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGTACTTTCTCTAGCTCCTCCATTGTGGACCCTGTGTTCCATCCAA  550

seq1  AGCGGACTGTGAGCATCCACTTCTATGTTTGCCAGGCACTGGCAAAGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGGACTGTGAGCATCCACTTCTATGTTTGCCAGGCACTGGCAAAGCCT  600

seq1  TACAAGAGACAGTTATCTCAGGGTCCTTTCAGCAAAATCTTGCTCGCATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAGAGACAGTTATCTCAGGGTCCTTTCAGCAAAATCTTGCTCGCATA  650

seq1  TGCAATAGTGTCTGTGTTTGTTGGCTGATTATGGGATGGATCCCCAGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATAGTGTCTGTGTTTGTTGGCTGATTATGGGATGGATCCCCAGGTG  700

seq1  CGGCAGTCCCTGGATGGTCC  720
      ||||||||||||||||||||
seq2  CGGCAGTCCCTGGATGGTCC  720