BAC Information

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BAC

Clone NameB6Ng01-129O01
Chromosome17 (Build37)
Map Location 76,899,816 - 77,073,830
singlet/doubletdoublet
Overlap genenone
Upstream geneRasgrp3, 2810405J04Rik, LOC668787, LOC100043885, LOC100043886
Downstream geneEG624348, LOC545234
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129O01.bB6Ng01-129O01.g
ACCDH931348DH931349
length1,168864
definitionDH931348|Mus musculus domesticus DNA, BAC clone: B6Ng01-129O01, 5' end.DH931349|Mus musculus domesticus DNA, BAC clone: B6Ng01-129O01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,899,816 - 76,900,846)(77,072,967 - 77,073,830)
sequence
gaattccaagctcctattctagctccattctttgtaatgcctaattagtt
tcactgtctctactagaagtaaatttgaatgttactgaataggtaacctt
ctcactgaattcctagtgaattccaagctcgtaggcttcaaggattttct
aggacgttggaacactggtggaggctcacttatgttaaaattcaatcttt
aaaggcacttataataaaacaatactgaagagagcatgtggatccatata
ccagactaacacggaaatagggcttgagtatacaggttatgagaatgcca
agatccaggaggcatagtatccttgaaacactttgcctcatcagtgcttc
caggcctcttggcctgtcaagtagacttcactggagtgggcgtagcaggg
ggctcaaacaaccctttaacagcagttggatatcagatatcatgactatc
agatatttacattataagtcattactagcaaaattacagttgtaaattaa
taccaaaataattttatggtgggagttcaccacagcatgaggaactgtat
taaagatattaaagagtccagcattagggaggttgagaaccactgattta
tactatcctgaaaatcttatattgcgtgcttcaattgttttctcaatcaa
gagcatttgtttacagcttcctatggatattagctagatacataattgat
aaagtatcttgcttgtctcctgttgaataatatttccttttccaattcta
attctgaaaaaatgcctcatatgtactagtccaattgcttgctacctggt
cagttactgcaggtgacttcacatgtcatctatcaagcatgaaatcttta
ggtctatccatactcaatatgtatttggtcataatgtatcctatttcaaa
aattcaatagttttcttattataaagggaaacaccaaactgttttgcttg
atacatctctccatccatacttcaataagcaaatagtacttttcttttgg
aaggactcatctttacacaactttgtctaagttcccatttctgaagccca
tgtgcttctggggaatttaggtctgaacattgacattctcttacacaata
aaactctggggcttaattccataaggactaaatacatcacgtactgctcc
atttctatcaattccttt
gaattcagaaattctcctgcctctgcctcccaagtgctgggattaaaggc
atgcaccaccatgcctggctctaaagttttcttatttaccatacacatag
gagctttttctgtcttggagtattagaactatttgaatattgttttttca
acttctcgacttatattcatctgctttatttttgttactgactaaataga
ttttaaaatttgactttaaaaacctgcatacttcatggttataaaaataa
ctttatatacgcatgggagcaattggcatatatcatatttttgtggatgg
ctcaaatatgacatctctgcctcttaacctcaaaacagaaatatctttat
ggagtatattttatgatatattattgagttgggcatggcattgtctcact
aattgttgtttctttatcctttacatatattacttattaacaagaaagaa
ggcagccactggacatcatagtgcatatttgtaaatgccagcacttgaga
aacttgtaacaagaaaatcatgactggatttgaggtcagcctgggcctta
tattgaactcaagtcaagtctaggacacagaggaaattctctaactaccc
aataaaacagaatacaaacaaaaatatcaaaatattatgtttcaggtatt
aaaatgtttgattaagatgcacccctttaatctcagcacttgggaggcag
agacaggtggatttcggagttcgaggtcagcctggtctacagagtgagtt
ccaggacagtcagggctatacagagaaatcctgtcttgaaaaaaaaaaaa
aatttatatatatatatatatatctatgtatatttttatatctccggatg
tgctgggaaagact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76899816_76900846
seq2: B6Ng01-129O01.b_187_1212

seq1  GATTTTCTAGGACGTTGGAACACTGGTGGAGGCTCACTTATGTTAAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCTAGGACGTTGGAACACTGGTGGAGGCTCACTTATGTTAAAATT  50

seq1  CAATCTTTAAAGGCACTTATAATAAAACAATACTGAAGAGAGCATGTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTTAAAGGCACTTATAATAAAACAATACTGAAGAGAGCATGTGGA  100

seq1  TCCATATACCAGACTAACACGGAAATAGGGCTTGAGTATACAGGTTATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATACCAGACTAACACGGAAATAGGGCTTGAGTATACAGGTTATGA  150

seq1  GAATGCCAAGATCCAGGAGGCATAGTATCCTTGAAACACTTTGCCTCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCCAAGATCCAGGAGGCATAGTATCCTTGAAACACTTTGCCTCATC  200

seq1  AGTGCTTCCAGGCCTCTTGGCCTGTCAAGTAGACTTCACTGGAGTGGGCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTCCAGGCCTCTTGGCCTGTCAAGTAGACTTCACTGGAGTGGGCG  250

seq1  TAGCAGGGGGCTCAAACAACCCTTTAACAGCAGTTGGATATCAGATATCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGGGGGCTCAAACAACCCTTTAACAGCAGTTGGATATCAGATATCA  300

seq1  TGACTATCAGATATTTACATTATAAGTCATTACTAGCAAAATTACAGTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACTATCAGATATTTACATTATAAGTCATTACTAGCAAAATTACAGTTG  350

seq1  TAAATTAATACCAAAATAATTTTATGGTGGGAGTTCACCACAGCATGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAATACCAAAATAATTTTATGGTGGGAGTTCACCACAGCATGAGG  400

seq1  AACTGTATTAAAGATATTAAAGAGTCCAGCATTAGGGAGGTTGAGAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTATTAAAGATATTAAAGAGTCCAGCATTAGGGAGGTTGAGAACCA  450

seq1  CTGATTTATACTATCCTGAAAATCTTATATTGCGTGCTTCAATTGTTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTATACTATCCTGAAAATCTTATATTGCGTGCTTCAATTGTTTTC  500

seq1  TCAATCAAGAGCATTTGTTTACAGCTTCCTATGGATATTAGCTAGATACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCAAGAGCATTTGTTTACAGCTTCCTATGGATATTAGCTAGATACA  550

seq1  TAATTGATAAAGTATCTTGCTTGTCTCCTGTTGAATAATATTTCCTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGATAAAGTATCTTGCTTGTCTCCTGTTGAATAATATTTCCTTTTC  600

seq1  CAATTCTAATTCTGAAAAAATGCCTCATATGTACTAGTCCAATTGCTTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTCTAATTCTGAAAAAATGCCTCATATGTACTAGTCCAATTGCTTGC  650

seq1  TACCTGGTCAGTTACTGCAGGTGACTTCACATGTCATCTATCAAGCATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTGGTCAGTTACTGCAGGTGACTTCACATGTCATCTATCAAGCATGA  700

seq1  AATCTTTAGGTCTATCCATACTCAATATGTATTTGGTCATAATGTATCCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTAGGTCTATCCATACTCAATATGTATTTGGTCATAATGTATCCT  750

seq1  ATTTCAAAAATTCAATAGTTTTCTTATTATAAAGGGAAACACC-AACTGT  799
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  ATTTCAAAAATTCAATAGTTTTCTTATTATAAAGGGAAACACCAAACTGT  800

seq1  TTGCCTGGATACATCTCTCCATCCAATACTTCAATAAGCAAATAGTTACT  849
      ||  || ||||||||||||||||| |||||||||||||||||||| ||||
seq2  TTTGCTTGATACATCTCTCCATCC-ATACTTCAATAAGCAAATAG-TACT  848

seq1  TTTCTTTTGGAAGGACTCATCTTTACACAACTTTGTCTAAGTTCCCATTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTGGAAGGACTCATCTTTACACAACTTTGTCTAAGTTCCCATTT  898

seq1  CTTGAAGCCCATGTGGTTCTGGGGATTTTAGTCCTGACCA-TGACATTCT  948
      | ||||||||||||| ||||||||| |||||  |||| || |||||||||
seq2  C-TGAAGCCCATGTGCTTCTGGGGAATTTAGGTCTGAACATTGACATTCT  947

seq1  CTTTACAACAATAAAAACTCTGGGGCTGTAATT-CATAAAGACCTAAATA  997
      | |||| ||||| |||||||||||||| ||||| ||||| || |||||||
seq2  C-TTAC-ACAAT-AAAACTCTGGGGCT-TAATTCCATAAGGA-CTAAATA  992

seq1  CATTCACAGTACTGCT-CATTTCTATC-ATTCCTTT  1031
      || |||| |||||||| |||||||||| ||||||||
seq2  CA-TCAC-GTACTGCTCCATTTCTATCAATTCCTTT  1026

seq1: chr17_77072967_77073830
seq2: B6Ng01-129O01.g_72_935 (reverse)

seq1  AGTCTTTCCCAGCACATCCGGATATATATATATATATATATATATATATA  50
      |||||||||||||||||||||| ||||| | ||||| ||| |||||||||
seq2  AGTCTTTCCCAGCACATCCGGAGATATAAAAATATACATAGATATATATA  50

seq1  TATATATATATATTTTTTTTTTTTTTCAAGACAGGATTTCTCTGTATAGC  100
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TATATATATAAATTTTTTTTTTTTTTCAAGACAGGATTTCTCTGTATAGC  100

seq1  CCTGACTGTCCTGGAACTCACTCTGTAGACCAGGCTGACCTCGAACTCCG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGACTGTCCTGGAACTCACTCTGTAGACCAGGCTGACCTCGAACTCCG  150

seq1  AAATCCACCTGTCTCTGCCTCCCAAGTGCTGAGATTAAAGGGGTGCATCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCACCTGTCTCTGCCTCCCAAGTGCTGAGATTAAAGGGGTGCATCT  200

seq1  TAATCAAACATTTTAATACCTGAAACATAATATTTTGATATTTTTGTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAACATTTTAATACCTGAAACATAATATTTTGATATTTTTGTTTG  250

seq1  TATTCTGTTTTATTGGGTAGTTAGAGAATTTCCTCTGTGTCCTAGACTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTCTGTTTTATTGGGTAGTTAGAGAATTTCCTCTGTGTCCTAGACTTG  300

seq1  ACTTGAGTTCAATATAAGGCCCAGGCTGACCTCAAATCCAGTCATGATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAGTTCAATATAAGGCCCAGGCTGACCTCAAATCCAGTCATGATTT  350

seq1  TCTTGTTACAAGTTTCTCAAGTGCTGGCATTTACAAATATGCACTATGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGTTACAAGTTTCTCAAGTGCTGGCATTTACAAATATGCACTATGAT  400

seq1  GTCCAGTGGCTGCCTTCTTTCTTGTTAATAAGTAATATATGTAAAGGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTGGCTGCCTTCTTTCTTGTTAATAAGTAATATATGTAAAGGATA  450

seq1  AAGAAACAACAATTAGTGAGACAATGCCATGCCCAACTCAATAATATATC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACAACAATTAGTGAGACAATGCCATGCCCAACTCAATAATATATC  500

seq1  ATAAAATATACTCCATAAAGATATTTCTGTTTTGAGGTTAAGAGGCAGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAATATACTCCATAAAGATATTTCTGTTTTGAGGTTAAGAGGCAGAG  550

seq1  ATGTCATATTTGAGCCATCCACAAAAATATGATATATGCCAATTGCTCCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCATATTTGAGCCATCCACAAAAATATGATATATGCCAATTGCTCCC  600

seq1  ATGCGTATATAAAGTTATTTTTATAACCATGAAGTATGCAGGTTTTTAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCGTATATAAAGTTATTTTTATAACCATGAAGTATGCAGGTTTTTAAA  650

seq1  GTCAAATTTTAAAATCTATTTAGTCAGTAACAAAAATAAAGCAGATGAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAAATTTTAAAATCTATTTAGTCAGTAACAAAAATAAAGCAGATGAAT  700

seq1  ATAAGTCGAGAAGTTGAAAAAACAATATTCAAATAGTTCTAATACTCCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTCGAGAAGTTGAAAAAACAATATTCAAATAGTTCTAATACTCCAA  750

seq1  GACAGAAAAAGCTCCTATGTGTATGGTAAATAAGAAAACTTTAGAGCCAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGAAAAAGCTCCTATGTGTATGGTAAATAAGAAAACTTTAGAGCCAG  800

seq1  GCATGGTGGTGCATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGGTGGTGCATGCCTTTAATCCCAGCACTTGGGAGGCAGAGGCAGGA  850

seq1  GAATTTCTGAATTC  864
      ||||||||||||||
seq2  GAATTTCTGAATTC  864