BAC Information

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BAC

Clone NameB6Ng01-133D01
Chromosome17 (Build37)
Map Location 71,985,146 - 72,135,300
singlet/doubletdoublet
Overlap geneWdr43, 4632412N22Rik, BC027072, Clip4
Upstream geneDlgap1, Tgif1, LOC668724, LOC546695, LOC240156, Mylc2b, 2900073G15Rik, Myom1, Lpin2, Emilin2, LOC100043644, Smchd1, LOC100043879, Ndc80, LOC668740, Spdya, LOC623451
Downstream geneAlk
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133D01.bB6Ng01-133D01.g
ACCDH933800DH933801
length9991,047
definitionDH933800|Mus musculus domesticus DNA, BAC clone: B6Ng01-133D01, 5' end.DH933801|Mus musculus domesticus DNA, BAC clone: B6Ng01-133D01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(72,134,761 - 72,135,300)(71,985,146 - 71,986,199)
sequence
gaattccaaaatataagtatttgtattttacaaacacagacttcaatgat
ccttctatttaatacctataaaacatctgtccactcaccacacatatgtt
acaagtatgtgagcctctattttcatgagacttaaaaacaaacctaagca
aataagcatgaaaaagcaccaccctaaggaccctttcatttgctacaaac
aaaacactggaaaagcagccttgagccctacacggaatatcagatacccg
ccctcaaggagttccatcacgattccaataaatactgtttctcattaagt
cctaagctgtgcattccaaagataaagagttaggcactcgccctcctata
gatactagcccagggctagatagctaccagaaacacaaatactgtacaat
tagtaatctgattgacaacagctggttataatgcagacaacgagataaga
cagcctaggatttctaaggatttctgataattagggactggatgaccacc
taggacatgtggctagctacaagtggcttttaaattgcccagttggtcta
gctcagagtttcttaatactgagggctgggaaggggatgacatacaatta
aatatggaatgtcacacacacacaaaaaaaatggcaatcagaaataattc
aggtttccaaatgcacagtcccctaagaataatacaaattcaaatgcata
ttgtatctggggtatttcagccagtgcttacagcgttatcatgtgacctc
actgcggccttggctctgaacacacagtgttcactgaacatgtggacatg
ccattcagtgccatctgatactgctccactcaccagatgcaagaccaggt
gtatgatgtcatgggttgccgtgtttcaaagtattctgctcttacagaaa
tgtaatgctttaattacggaaaacaaagactttaataagtttccattgtc
gttcctcagcgtgtacgcatcaaattagcatattttaagaattagattt
gaattcttttaatttttttgaacgatacaaatggcaagatgttggttact
aaatattaagaaagattttgtcaggaagtttcagaacttcagttcagttc
tctgcacaggaagctgatagcaaaagtgtgatggacgggagtcccagacc
agggggccagaggagccagtgcgcccacctcctctatggatgcgaagctg
tgttttcatcagtcctgactgctgggactgggacattccagagtcattca
ttctctagtttaccttggaggctgctttgtgcctatgccaccttcttggc
ctaaacattattttccagtcttgacaagaacaacagttaatttgtaagag
agacagatttcgttaaagaattgtgtgagtcaagtaaagtgtgaaggtgt
gcccttttaatccagcactccagaggcataggctagcctgctctacgata
gttctaggatggtctgggctatccaccctcccaagtttgtttgcttgtat
gcatctgtgtgttcagaggacagttttatagtcagttctctccattttta
tatagattttggtcggctaaactaaagttgctgtccttgtataacaaatg
tctacctgttgcctgagccatctgtctggccccggatagtggtttttatt
ctagttactaaggagttagggcaagagttccgtgttcacgagctaacctg
aagactggttagatagctgcctagaattaatcaaccgtgtttctctttta
gcctgtcaagttagctgttgtttgcagagatggtcaagttcatctttttg
aacacatattaaatgggtaagtaagaggtttttaaattagagtttaaaag
cctgcttgtttctgtgttcttttgtgttatatccaacctcccgctttgca
ttgtattcctgcttgttctgttagattattgtgaaaacattcttggttgc
acattcatatgactatgtgaagaactcaagtgtggggtgatggcctttgt
cttttcttgggttagagagcggcttttcgtggggtcaatatagtgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_72134761_72135300
seq2: B6Ng01-133D01.b_48_587 (reverse)

seq1  GGGCAATTTAAAAGCCACTTGTAGCTAGCCACATGTCCTAGGTGGTCATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATTTAAAAGCCACTTGTAGCTAGCCACATGTCCTAGGTGGTCATC  50

seq1  CAGTCCCTAATTATCAGAAATCCTTAGAAATCCTAGGCTGTCTTATCTCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCCCTAATTATCAGAAATCCTTAGAAATCCTAGGCTGTCTTATCTCG  100

seq1  TTGTCTGCATTATAACCAGCTGTTGTCAATCAGATTACTAATTGTACAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTGCATTATAACCAGCTGTTGTCAATCAGATTACTAATTGTACAGT  150

seq1  ATTTGTGTTTCTGGTAGCTATCTAGCCCTGGGCTAGTATCTATAGGAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTGTTTCTGGTAGCTATCTAGCCCTGGGCTAGTATCTATAGGAGGG  200

seq1  CGAGTGCCTAACTCTTTATCTTTGGAATGCACAGCTTAGGACTTAATGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTGCCTAACTCTTTATCTTTGGAATGCACAGCTTAGGACTTAATGAG  250

seq1  AAACAGTATTTATTGGAATCGTGATGGAACTCCTTGAGGGCGGGTATCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTATTTATTGGAATCGTGATGGAACTCCTTGAGGGCGGGTATCTG  300

seq1  ATATTCCGTGTAGGGCTCAAGGCTGCTTTTCCAGTGTTTTGTTTGTAGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCGTGTAGGGCTCAAGGCTGCTTTTCCAGTGTTTTGTTTGTAGCA  350

seq1  AATGAAAGGGTCCTTAGGGTGGTGCTTTTTCATGCTTATTTGCTTAGGTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAGGGTCCTTAGGGTGGTGCTTTTTCATGCTTATTTGCTTAGGTT  400

seq1  TGTTTTTAAGTCTCATGAAAATAGAGGCTCACATACTTGTAACATATGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTAAGTCTCATGAAAATAGAGGCTCACATACTTGTAACATATGTG  450

seq1  TGGTGAGTGGACAGATGTTTTATAGGTATTAAATAGAAGGATCATTGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGTGGACAGATGTTTTATAGGTATTAAATAGAAGGATCATTGAAG  500

seq1  TCTGTGTTTGTAAAATACAAATACTTATATTTTGGAATTC  540
      ||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTTTGTAAAATACAAATACTTATATTTTGGAATTC  540

seq1: chr17_71985146_71986199
seq2: B6Ng01-133D01.g_65_1111

seq1  GAATTCTTTTAATTTTTTTGAACGATACAAATGGCAAGATGTTGGTTACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTAATTTTTTTGAACGATACAAATGGCAAGATGTTGGTTACT  50

seq1  AAATATTAAGAAAGATTTTGTCAGGAAGTTTCAGAACTTCAGTTCAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATTAAGAAAGATTTTGTCAGGAAGTTTCAGAACTTCAGTTCAGTTC  100

seq1  TCTGCACAGGAAGCTGATAGCAAAAGTGTGATGGACGGGAGTCCCAGACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACAGGAAGCTGATAGCAAAAGTGTGATGGACGGGAGTCCCAGACC  150

seq1  AGGGGGCCAGAGGAGCCAGTGCGCCCACCTCCTCTATGGATGCGAAGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGCCAGAGGAGCCAGTGCGCCCACCTCCTCTATGGATGCGAAGCTG  200

seq1  TGTTTTCATCAGTCCTGACTGCTGGGACTGGGACATTCCAGAGTCATTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTCATCAGTCCTGACTGCTGGGACTGGGACATTCCAGAGTCATTCA  250

seq1  TTCTCTAGTTTACCTTGGAGGCTGCTTTGTGCCTATGCCACCTTCTTGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAGTTTACCTTGGAGGCTGCTTTGTGCCTATGCCACCTTCTTGGC  300

seq1  CTAAACATTATTTTCCAGTCTTGACAAGAACAACAGTTAATTTGTAAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACATTATTTTCCAGTCTTGACAAGAACAACAGTTAATTTGTAAGAG  350

seq1  AGACAGATTTCGTTAAAGAATTGTGTGAGTCAAGTAAAGTGTGAAGGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGATTTCGTTAAAGAATTGTGTGAGTCAAGTAAAGTGTGAAGGTGT  400

seq1  GCCCTTTTAATCCAGCACTCCAGAGGCATAGGCTAGCCTGCTCTACGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTTAATCCAGCACTCCAGAGGCATAGGCTAGCCTGCTCTACGATA  450

seq1  GTTCTAGGATGGTCTGGGCTATCCACCCTCCCAAGTTTGTTTGCTTGTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTAGGATGGTCTGGGCTATCCACCCTCCCAAGTTTGTTTGCTTGTAT  500

seq1  GCATCTGTGTGTTCAGAGGACAGTTTTATAGTCAGTTCTCTCCATTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGTGTGTTCAGAGGACAGTTTTATAGTCAGTTCTCTCCATTTTTA  550

seq1  TATAGATTTTGGTCGGCTAAACTAAAGTTGCTGTCCTTGTATAACAAATG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGATTTTGGTCGGCTAAACTAAAGTTGCTGTCCTTGTATAACAAATG  600

seq1  TCTACCTGTTGCCTGAGCCATCTGTCTGGCCCCGGATAGTGGTTTTTATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTGTTGCCTGAGCCATCTGTCTGGCCCCGGATAGTGGTTTTTATT  650

seq1  CTAGTTACTAAGGAGTTAGGGCAAGAGTTCCGTGTTCACGAGCTAACCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTACTAAGGAGTTAGGGCAAGAGTTCCGTGTTCACGAGCTAACCTG  700

seq1  AAGACTGGTTAGATAGCTGCCTAGAATTAATCAACCGTGTTTCTCTTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGGTTAGATAGCTGCCTAGAATTAATCAACCGTGTTTCTCTTTTA  750

seq1  GCCTGTCAAGTTAGCTGTTGTTTGCAGAGATGGTCAAGTTCATCTTTTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTCAAGTTAGCTGTTGTTTGCAGAGATGGTCAAGTTCATCTTTTTG  800

seq1  AACACATATTAAATGGGTAAGTAAGAGGTTTTTAAATTAGAGTTTAAAAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACATATTAAATGGGTAAGTAAGAGGTTTTTAAATTAGAGTTTAAAAG  850

seq1  CCTGCTTGTTTCTGTGTTCTTTTGTGTTATAATCCAACCTCCCGCTTTGC  900
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CCTGCTTGTTTCTGTGTTCTTTTGTGTTAT-ATCCAACCTCCCGCTTTGC  899

seq1  ATTGTATTCCTGCTTGTTCTGTTAGATTATTGTGAAAACATTCTTGGTTG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATTCCTGCTTGTTCTGTTAGATTATTGTGAAAACATTCTTGGTTG  949

seq1  CACATTCATATGACTATGTGAAGAACTCAAGTGTGGGGGTGATGGGCTGT  1000
      |||||||||||||||||||||||||||||||||| |||||||||| || |
seq2  CACATTCATATGACTATGTGAAGAACTCAAGTGT-GGGGTGATGGCCTTT  998

seq1  GTCTTTTCTTTGTGGTTAGGAGAGCGGCTTTTCGTGGGGTGCATATATAG  1050
      ||||||||||   ||||| ||||||||||||||||||||| || ||||||
seq2  GTCTTTTCTT--GGGTTA-GAGAGCGGCTTTTCGTGGGGT-CA-ATATAG  1043

seq1  TGAA  1054
      ||||
seq2  TGAA  1047