BAC Information

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BAC

Clone NameB6Ng01-133N13
Chromosome17 (Build37)
Map Location 33,110,742 - 33,210,991
singlet/doubletdoublet
Overlap geneZfp472, C920016K16Rik, 1700065O13Rik, 4921501E09Rik
Upstream geneHsf2bp, Rrp1b, LOC435518, Notch3, Pdxk-ps, Abhd9, Brd4, LOC100043434, LOC100043433, Akap8, Akap8l, Wiz, A430107D22Rik, Pglyrp2, 4732474A20Rik, EG208285, Cyp4f16, LOC667178, LOC677156, EG631304, Cyp4f15, LOC623809, 9030612M13Rik, Zfp811, 6030490I01Rik, LOC631266, BC066107, Cyp4f14, Cyp4f13, 6030422M01Rik
Downstream geneZfp563, Morc2b, LOC100038859, LOC100038860, LOC100043474, Zfp422-rs1, Olfr63, LOC100043468, Zfp81, Zfp101, 1700029I08Rik, LOC100042953, Adamts10, Myo1f, Zfp414, Pram1, Hnrpm, March2, Rab11b, Angptl4, Ankrd47, Rps28, Ndufa7, Cd320, LOC100042967, LOC630219, LOC100042970, BC051226, Daxx, Zbtb22, Tapbp, Rgl2, H2-Ke2, Wdr46, B3galt4, Rps18, Vps52, EG630499, LOC100042989, AA388235, H2-K1, LOC654352, Ring1, H2-Ke6, Slc39a7, Rxrb, Col11a2, LOC672505
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133N13.bB6Ng01-133N13.g
ACCDH934292DH934293
length1,106963
definitionDH934292|Mus musculus domesticus DNA, BAC clone: B6Ng01-133N13, 5' end.DH934293|Mus musculus domesticus DNA, BAC clone: B6Ng01-133N13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,110,742 - 33,111,855)(33,210,436 - 33,210,991)
sequence
gaattcatctagcaatatggaatttcatcaaagaagtaaaattatagtta
gctgatgatctagctatatgattaggaaatataaaggaaatgttcacatg
ggcatacaataaaaacaccttcatatccaaatttatgacctcatagttta
gaatagccaagtcaaaaaaaaaatagccaaatactattcagaaaataatt
tacttggatttttttattgtgttctaagttcttttcacataccaccatta
ctctcacttcttttccttctgaagcatttattcctaacaggtccctctct
ttgtttgtgccctactgaatttaaggagcattgcttgaatgaacctgggt
atatttttatattttgtttttgagataggctctcactgtatagctctagt
aggcctggaacttgagagttttgcctgcctttgcttccatcttttgggat
taaatgtgtatgccaccctacccagctgttggtcatctgttgatttgttt
ttactggtgtgtagggaactatagctctggacaaaatgattcatttccgt
tagtgttagcagccactaacagtcagtatcctcagaaaggggaatcgcct
caggaagggtgatgggcattatcctgtgcccgttaccacagcctctgtga
attgcggtatattgcctatgtttgtcaagaagaccacatttcacacctct
ctttgatgacccatttaggcctaagcactcaccaatcacttgatctcaga
acattgaccagctccgtagtctctgcattaactattaactactgcaaata
aatgtcccctcaccaagactgaaagcagtgcatatctgtggatagactta
tacatatttagagaaccattttgaaagcatttcagtttagaaaaacaaaa
ctaattagtaccccctttgggcctgtcacctccctaagcaatagtttaaa
gtaacagccgtgtgttcgttcctatggagatccctgaaatccatcagaaa
gcgttagtttcgttgctgtgataaacgccttatcaaagcaacatggggga
ggcgatggttatttttctaaacttccagttgtcattgaagggaagtcagg
gcaaca
gaattccatgatcatctcatagaattaaaatagttttgacaaaggtcatt
gtccctgaggctggagaaatgatgtctcagtggttaagaatactcactgc
tatatcagaagactagagttctgatcccagaacccatgtcaggcagctca
taaatgcctgtaactccagctccagtggatttgatatcctgcttctgact
tctgttggcagagcacacacacatatgcacacacacacacacacacacac
acacacacacacacacacgcacactcagagagagagaggggggctaaaat
atcttaaattttaaagtcaacatctctttacaataaaatctctgaagaat
aggggactaaaagcaagacaacagaatacaaaacgagtatatataacaaa
actaatggcaatgttatactaaatggggaaaaactgaaggcattccctct
aaaaccaagatcaagataactgtattgattctctttactcttcaaaacag
agctcaaatttcagctagtgaaataataagaaaaaaataaaaaggcatac
tactaggaggagaggactaatatctctgtttgcagacatacgtgtagcct
gtagcctattcactaaaagaaatcaaaagattccatgagaaagctcttga
atctaattttctaaaaacaaagttctacaggtaccaagacgaaaaagtaa
ccatagaaaaatcagtatcatttctacatagcaataataaatttgttaag
aaagcaacaagaagggaagttctagtatttttaaaatactgacataacta
gggatgtaaaatacttctacagtgaaaagttcaagacactgagaagagaa
agtgaagaagacagcagcacaggacgagctcctatgatcatggattcgta
gaaggaatactgtcatattgtgcccattactgaaagtgaacttcggatta
agtgcaaacaacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_33110742_33111855
seq2: B6Ng01-133N13.b_50_1155

seq1  GAATTCATCTAGCAATATGGAATTTCATCAAAGAAGTAAAATTATAGTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTAGCAATATGGAATTTCATCAAAGAAGTAAAATTATAGTTA  50

seq1  GCTGATGATCTAGCTATATGATTAGGAAATATAAAGGAAATGTTCACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGATCTAGCTATATGATTAGGAAATATAAAGGAAATGTTCACATG  100

seq1  GGCATACAATAAAAACACCTTCATATCCAAATTTATGACCTCATAGTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATACAATAAAAACACCTTCATATCCAAATTTATGACCTCATAGTTTA  150

seq1  GAATAGCCAAGTCAAAAAAAAAATAGCCAAATACTATTCAGAAAATAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGCCAAGTCAAAAAAAAAATAGCCAAATACTATTCAGAAAATAATT  200

seq1  TACTTGGATTTTTTTATTGTGTTCTAAGTTCTTTTCACATACCACCATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTGGATTTTTTTATTGTGTTCTAAGTTCTTTTCACATACCACCATTA  250

seq1  CTCTCACTTCTTTTCCTTCTGAAGCATTTATTCCTAACAGGTCCCTCTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACTTCTTTTCCTTCTGAAGCATTTATTCCTAACAGGTCCCTCTCT  300

seq1  TTGTTTGTGCCCTACTGAATTTAAGGAGCATTGCTTGAATGAACCTGGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGTGCCCTACTGAATTTAAGGAGCATTGCTTGAATGAACCTGGGT  350

seq1  ATATTTTTATATTTTGTTTTTGAGATAGGCTCTCACTGTATAGCTCTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTATATTTTGTTTTTGAGATAGGCTCTCACTGTATAGCTCTAGT  400

seq1  AGGCCTGGAACTTGAGAGTTTTGCCTGCCTTTGCTTCCATCTTTTGGGAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCTGGAACTTGAGAGTTTTGCCTGCCTTTGCTTCCATCTTTTGGGAT  450

seq1  TAAATGTGTATGCCACCCTACCCAGCTGTTGGTCATCTGTTGATTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGTGTATGCCACCCTACCCAGCTGTTGGTCATCTGTTGATTTGTTT  500

seq1  TTACTGGTGTGTAGGGAACTATAGCTCTGGACAAAATGATTCATTTCCGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGTGTGTAGGGAACTATAGCTCTGGACAAAATGATTCATTTCCGT  550

seq1  TAGTGTTAGCAGCCACTAACAGTCAGTATCCTCAGAAAGGGGAATCGCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTTAGCAGCCACTAACAGTCAGTATCCTCAGAAAGGGGAATCGCCT  600

seq1  CAGGAAGGGTGATGGGCATTATCCTGTGCCCGTTACCACAGCCTCTGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGGGTGATGGGCATTATCCTGTGCCCGTTACCACAGCCTCTGTGA  650

seq1  ATTGCGGTATATTGCCTATGTTTGTCAAGAAGACCACATTTCACACCTCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCGGTATATTGCCTATGTTTGTCAAGAAGACCACATTTCACACCTCT  700

seq1  CTTTGATGACCCATTTAGGCCTAAGCACTCACCAATCACTTGATCTCAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATGACCCATTTAGGCCTAAGCACTCACCAATCACTTGATCTCAGA  750

seq1  ACATTGACCAGCTCCGTAGTCTCTGCATTAACTATTAACTACTGCAAATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTGACCAGCTCCGTAGTCTCTGCATTAACTATTAACTACTGCAAATA  800

seq1  AATGTCCCCTCACCAAGACTGAAAGCAGTGCATATCTGTGGATAGACTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCCCCTCACCAAGACTGAAAGCAGTGCATATCTGTGGATAGACTTA  850

seq1  TACATATTTAGAGAACCATTTTGAAAGCATTTCAGTTTAGAAAAACAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATATTTAGAGAACCATTTTGAAAGCATTTCAGTTTAGAAAAACAAAA  900

seq1  CTAATTAGTACCCCCTTTGGGCCTGTCACCTCCCTAAGCAATAGTTTAAA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTAGTACCCCCTTTGGGCCTGTCACCTCCCTAAGCAATAGTTTAAA  950

seq1  GTAACAGCCGTGTGTTCGTTCCTATGGAGAATCCCTGAAATCCAATCAGA  1000
      ||||||||||||||||||||||||||||| ||||||||||||| ||||||
seq2  GTAACAGCCGTGTGTTCGTTCCTATGGAG-ATCCCTGAAATCC-ATCAGA  998

seq1  AAGCGTTAGTTTCGGTTGCTGTGATAAAACGCCCTTATCAAAAGCAACAT  1050
      ||||||||||||| ||||||||||| ||||| ||||||| ||||||||||
seq2  AAGCGTTAGTTTC-GTTGCTGTGAT-AAACG-CCTTATC-AAAGCAACAT  1044

seq1  GGGGGAGGCGATGGTTTATTTTTCTTACACTTCCAGTTGGTCATTG-AGG  1099
      |||||||||||||| ||||||||| || |||||||||| ||||||| |||
seq2  GGGGGAGGCGATGG-TTATTTTTC-TAAACTTCCAGTT-GTCATTGAAGG  1091

seq1  GAAGTCAGGGCAACA  1114
      |||||||||||||||
seq2  GAAGTCAGGGCAACA  1106

seq1: chr17_33210436_33210991
seq2: B6Ng01-133N13.g_70_625 (reverse)

seq1  CTAGTAGTATGCCTTTTTATTTTTTTCTTATTATTTCACTAGCTGAAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTAGTATGCCTTTTTATTTTTTTCTTATTATTTCACTAGCTGAAATT  50

seq1  TGAGCTCTGTTTTGAAGAGTAAAGAGAATCAATACAGTTATCTTGATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCTCTGTTTTGAAGAGTAAAGAGAATCAATACAGTTATCTTGATCTT  100

seq1  GGTTTTAGAGGGAATGCCTTCAGTTTTTCCCCATTTAGTATAACATTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTAGAGGGAATGCCTTCAGTTTTTCCCCATTTAGTATAACATTGCC  150

seq1  ATTAGTTTTGTTATATATACTCGTTTTGTATTCTGTTGTCTTGCTTTTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTTTTGTTATATATACTCGTTTTGTATTCTGTTGTCTTGCTTTTAG  200

seq1  TCCCCTATTCTTCAGAGATTTTATTGTAAAGAGATGTTGACTTTAAAATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTATTCTTCAGAGATTTTATTGTAAAGAGATGTTGACTTTAAAATT  250

seq1  TAAGATATTTTAGCCCCCCTCTCTCTCTCTGAGTGTGCGTGTGTGTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGATATTTTAGCCCCCCTCTCTCTCTCTGAGTGTGCGTGTGTGTGTGT  300

seq1  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATATGTGTGTGTGCTCTGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGTGTGTGTGTGTGCATATGTGTGTGTGCTCTGCC  350

seq1  AACAGAAGTCAGAAGCAGGATATCAAATCCACTGGAGCTGGAGTTACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAGTCAGAAGCAGGATATCAAATCCACTGGAGCTGGAGTTACAGG  400

seq1  CATTTATGAGCTGCCTGACATGGGTTCTGGGATCAGAACTCTAGTCTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTATGAGCTGCCTGACATGGGTTCTGGGATCAGAACTCTAGTCTTCT  450

seq1  GATATAGCAGTGAGTATTCTTAACCACTGAGACATCATTTCTCCAGCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATAGCAGTGAGTATTCTTAACCACTGAGACATCATTTCTCCAGCCTC  500

seq1  AGGGACAATGACCTTTGTCAAAACTATTTTAATTCTATGAGATGATCATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGACAATGACCTTTGTCAAAACTATTTTAATTCTATGAGATGATCATG  550

seq1  GAATTC  556
      ||||||
seq2  GAATTC  556