BAC Information

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BAC

Clone NameB6Ng01-134D20
Chromosome17 (Build37)
Map Location 9,968,834 - 10,147,387
singlet/doubletdoublet
Overlap genenone
Upstream genePde10a, 1700010I14Rik, EG667165, EG667170, LOC666143, 4932702K14Rik
Downstream geneQk, LOC675815, Pacrg, Park2, LOC100041113
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134D20.bB6Ng01-134D20.g
ACCDH934588DH934589
length896350
definitionDH934588|Mus musculus domesticus DNA, BAC clone: B6Ng01-134D20, 5' end.DH934589|Mus musculus domesticus DNA, BAC clone: B6Ng01-134D20, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,146,495 - 10,147,387)(9,968,834 - 9,969,153)
sequence
gaattcatcagtttgcatgtctgcatgtgtgtgtgtgtgcgtgagtgtgt
gtgtgcgtgagtgtgtgtaccttactgaatgtatggttttatagtttatg
tgttcccttatgataacaccacaagcatttatacaaatggagtgtttggg
tatatttggatatttttgttggtggtgttgagatttacgaagaagatgtc
ttggtttctggtagattccaacctctgtcagcagagatatcatccaggga
gcttggatgattctttatgctagcagtttgccagcactcatgcctagtta
ccgcgttaaagtgcataattgctgcgtgaggaggagcgctcacttgggtt
taaagctatgtctcatcgcaccatgcattgtctaaaaaagcatgtatttt
gacctttaaatactttatattttcctcttattatgactgttcacaagaac
cctttctcattttagatttcccccactcgtttgtaaatcagaaaccagtg
ttaaaaaaaaaacaaaaaacaaaacaaaacaaaacaaaacaaaacaaaaa
acagaacaagcgtccaaagcattgggaccgcatctacttcaaaatcaatg
tttttccatttcaaatttgccaaaagaaaaattcatattgacaaacattc
tgttttgacatatactgacgtttcaaaaatggcgatcatcattgaagatg
aaagaattctaagtgcaagccaatgccagattttatcccttaaaatgttt
ctaaaattttccatttaatccagctctattactgtgaatttgttttaaag
ttgcctcaatatgaggaagttgacttgtaaaagctggatttgcttgaaga
agacggaggaaccagtgaggggacaggagttgggggggtggggaga
ctcagtcatttatgcaagttttcagaaacgctccactgttccccaacaaa
aaaagcattcagggtgagagtgggggctcccccaccagacctggagagtg
gctttggggacttgaatggacgcttcgtccggtgtcaatggtctctgtgg
gaaaggcagtgatgtcaccgcaaatgcatctagggttttgctaggccacc
cttacttgctacccacttcctccgttgttgtctgactttctctccttttc
ttttcctctctctctctctctctctctctctctctctctctctctctctc
tctctctctctctctctccctctctatctctctctctctctctctctctc

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_10146495_10147387
seq2: B6Ng01-134D20.b_41_936 (reverse)

seq1  TCTCCCCA-CCCCCCAACTCCTGTCCCCTCACTGGTTCCTCCGTCTTCCT  49
      |||||||| ||||||||||||||||||||||||||||||||||||||| |
seq2  TCTCCCCACCCCCCCAACTCCTGTCCCCTCACTGGTTCCTCCGTCTTCTT  50

seq1  CAAGCAAATCCAGCTTTTAC-AGTCAACTTCCTCATATTGAGGCAACTTT  98
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CAAGCAAATCCAGCTTTTACAAGTCAACTTCCTCATATTGAGGCAACTTT  100

seq1  AAAACAAATTCACAGTAATAGAGCTGGATTAAATGGAAAATTTTAG-AAC  147
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  AAAACAAATTCACAGTAATAGAGCTGGATTAAATGGAAAATTTTAGAAAC  150

seq1  ATTTTAAGGGATAAAATCTGGCATTGGCTTGCACTTAGAATTCTTTCATC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAGGGATAAAATCTGGCATTGGCTTGCACTTAGAATTCTTTCATC  200

seq1  TTCAATGATGATCGCCATTTTTGAAACGTCAGTATATGTCAAAACAGAAT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATGATGATCGCCATTTTTGAAACGTCAGTATATGTCAAAACAGAAT  250

seq1  GTTTGTCAATATGAATTTTTCTTTTGGCAAATTTGAAATGGAAAAACATT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTCAATATGAATTTTTCTTTTGGCAAATTTGAAATGGAAAAACATT  300

seq1  GATTTTGAAGTAGATGCGGTCCCAATGCTTTGGACGCTTGTTCTGTTTTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGAAGTAGATGCGGTCCCAATGCTTTGGACGCTTGTTCTGTTTTT  350

seq1  TGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTGTTTTTTTTTTAACACT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGTTTTGTTTTGTTTTGTTTTGTTTTTTGTTTTTTTTTTAACACT  400

seq1  GGTTTCTGATTTACAAACGAGTGGGGGAAATCTAAAATGAGAAAGGGTTC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCTGATTTACAAACGAGTGGGGGAAATCTAAAATGAGAAAGGGTTC  450

seq1  TTGTGAACAGTCATAATAAGAGGAAAATATAAAGTATTTAAAGGTCAAAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAACAGTCATAATAAGAGGAAAATATAAAGTATTTAAAGGTCAAAA  500

seq1  TACATGCTTTTTTAGACAATGCATGGTGCGATGAGACATAGCTTTAAACC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCTTTTTTAGACAATGCATGGTGCGATGAGACATAGCTTTAAACC  550

seq1  CAAGTGAGCGCTCCTCCTCACGCAGCAATTATGCACTTTAACGCGGTAAC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAGCGCTCCTCCTCACGCAGCAATTATGCACTTTAACGCGGTAAC  600

seq1  TAGGCATGAGTGCTGGCAAACTGCTAGCATAAAGAATCATCCAAGCTCCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCATGAGTGCTGGCAAACTGCTAGCATAAAGAATCATCCAAGCTCCC  650

seq1  TGGATGATATCTCTGCTGACAGAGGTTGGAATCTACCAGAAACCAAGACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATGATATCTCTGCTGACAGAGGTTGGAATCTACCAGAAACCAAGACA  700

seq1  TCTTCTTCGTAAATCTCAACACCACCAACAAAAATATCCAAATATACCCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTCGTAAATCTCAACACCACCAACAAAAATATCCAAATATACCCA  750

seq1  AACACTCCATTTGTATAAATGCTTGTGGTGTTATCATAAGGGAACACATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTCCATTTGTATAAATGCTTGTGGTGTTATCATAAGGGAACACATA  800

seq1  AACTATAAAACCATACATTCAGTAAGGTACACACACTCACGCACACACAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAAAACCATACATTCAGTAAGGTACACACACTCACGCACACACAC  850

seq1  ACTCACGCACACACACACACATGCAGACATGCAAACTGATGAATTC  893
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACGCACACACACACACATGCAGACATGCAAACTGATGAATTC  896

seq1: chr17_9968834_9969153
seq2: B6Ng01-134D20.g_64_391

seq1  GAATTCCTCAGTCATTTATGCAAGTTTTCAGAAACGCTCCACTGTTCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCAGTCATTTATGCAAGTTTTCAGAAACGCTCCACTGTTCCCC  50

seq1  AACAAAAAAAGCATTCAGGGTGAGAGTGGGGGCTCCCCCACCAGACCTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAAAAAGCATTCAGGGTGAGAGTGGGGGCTCCCCCACCAGACCTGG  100

seq1  AGAGTGGCTTTGGGGACTTGAATGGACGCTTCGTCCGGTGTCAATGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGGCTTTGGGGACTTGAATGGACGCTTCGTCCGGTGTCAATGGTCT  150

seq1  CTGTGGGAAAGGCAGTGATGTCACCGCAAATGCATCTAGGGTTTTGCTAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGAAAGGCAGTGATGTCACCGCAAATGCATCTAGGGTTTTGCTAG  200

seq1  GCCACCCTTACTTGCTACCCACTTCCTCCGTTGTTGTCTGACTTTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCCTTACTTGCTACCCACTTCCTCCGTTGTTGTCTGACTTTCTCTC  250

seq1  CTTTTCTTTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTTTTCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  300

seq1  TCTCTCTCTCTCCCTCCCTC--------  320
      |||||||||||| ||| |||        
seq2  TCTCTCTCTCTCTCTCTCTCTCTCCCTC  328