BAC Information

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BAC

Clone NameB6Ng01-134I17
Chromosome17 (Build37)
Map Location 74,123,156 - 74,265,127
singlet/doubletdoublet
Overlap geneEhd3, LOC240160, Xdh
Upstream geneYpel5, Lbh, Lycat, LOC668709, Capn13, LOC100043666, Galnt14
Downstream geneSrd5a2, Memo1, EG668716, 2810410M20Rik, LOC668773, LOC668775, Spast, Slc30a6, Nlrc4, LOC100043883, LOC624159, Yipf4, Birc6, Ttc27
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-134I17.bB6Ng01-134I17.g
ACCDH934814DH934815
length1,142213
definitionDH934814|Mus musculus domesticus DNA, BAC clone: B6Ng01-134I17, 5' end.DH934815|Mus musculus domesticus DNA, BAC clone: B6Ng01-134I17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,263,971 - 74,265,127)(74,123,156 - 74,123,368)
sequence
gaattccctgttatctcacttccacagatgtgtggtaaactggaccccac
ctttgccagcgccaccctgctctttcagaaggatcctccagctaacgtcc
agcttttccaagtgagtacacacagcgtgtctaataacagggcgccacag
ccgcatgcgatgactcctggctgagctttggcaaaggactgacttgaaag
gcctggaccctttgtgtaaacatccagggaaggacaccagagccacactg
ctgccactgcagctatcttgtccttgatggcgtccctttctctcttagga
ctcggtgtcaacctgtgtctgttccatagggaaaaagaaaaatctatttt
gtccttcctgactcctgttgtgccaatccaaaagtcttcttgaagatgca
tgcatgaatgtgtgcatgcatacaaacatgtcatttcatagcttttggga
ggatattttaggtaaaacgccagcacatatcctgtccgcatttgagaatt
tgtgaccagacagtgcatgcatctctgtagcacaaagcagctgtaaacat
aaatgaatgaggggctgggaatacagctcatttggtagagtgcttgctca
tgcaggaagcttgcttatgccagggcttgtgcagaaagccctgggttcag
accctggcaccccataaaacagctgtgggggagcagcatacttataatcc
ccaccccagagaagtagaagcaggaggatcaggatgagtttgaggctatc
ttcagccacacagtccagtatacaggagactctgtctctgaaaatgaaac
aacccaaaacatccaaaataaacgtgccaagctaagtaagtatttataga
accaagcactggctgcagtttgctgagccctgagttggtggcccacagat
gagctagctctagggcacggttgtctggttgcaatacaaagtttgtcctt
tctgtaacctgggcaaaccacctttgtgcttcttgggcaagttattagat
ccacctacaactgcggataatggacaacttgtttcccagacggagaaaat
ggacgtgtgttttcttgggcgtgcagctcatgcttaagctgataaaaccc
cgggacatctctatgctgaaataaatagctgcctgagtccat
caagacagtcaggaacttgtctcaaagagatacaagaaaaaaagacaaag
aaaaaaatctttctgaccaaaagcaagttgggggcagaggggaggaaggg
tttattttggcttacaattccaagtcacagtcagtcactgtgtggaagtc
aaggcaagaacctggaggcaggaaccacaaaggaacaggactagattcac
attgaattcttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_74263971_74265127
seq2: B6Ng01-134I17.b_43_1184 (reverse)

seq1  ATGGACTTCTAAGCAGCTTAATTTAATTTTTCAGCACTAGAGATGTTCCC  50
      |||||||   | ||||||  |||||   |||||||| |||||||| ||||
seq2  ATGGACT--CAGGCAGCT--ATTTA---TTTCAGCA-TAGAGATG-TCCC  41

seq1  GAGGTCTTACTCAGCTCTAGCACTGAGCTGCACGCCC-AGAAAACACACG  99
      | ||| ||| ||||||  |||| |||||||||||||| ||||||||||||
seq2  GGGGTTTTA-TCAGCTTAAGCA-TGAGCTGCACGCCCAAGAAAACACACG  89

seq1  TCCATCTTCTCCGGTTCTGTGAAACAAGTTTGTCATTATCCGCATGTTGT  149
      ||||| |||||||  |||| ||||||||||   ||||||||||| |||||
seq2  TCCATTTTCTCCG--TCTGGGAAACAAGTTGTCCATTATCCGCA-GTTGT  136

seq1  AGGTGGATCTAATTAACTTGCCCAAGAAGCACAGAGGTGGTTTGCCCAAG  199
      |||||||||||| |||||||||||||||||||| ||||||||||||| ||
seq2  AGGTGGATCTAA-TAACTTGCCCAAGAAGCACAAAGGTGGTTTGCCC-AG  184

seq1  GTTACAGAAAGGACAAACTTTGTATTGCAACCAGACAACCGTGCCCTAGA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACAGAAAGGACAAACTTTGTATTGCAACCAGACAACCGTGCCCTAGA  234

seq1  GCTAGCTCATCTGTGGGCCACCAACTCAGGGCTCAGCAAACTGCAGCCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGCTCATCTGTGGGCCACCAACTCAGGGCTCAGCAAACTGCAGCCAG  284

seq1  TGCTTGGTTCTATAAATACTTACTTAGCTTGGCACGTTTATTTTGGATGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTGGTTCTATAAATACTTACTTAGCTTGGCACGTTTATTTTGGATGT  334

seq1  TTTGGGTTGTTTCATTTTCAGAGACAGAGTCTCCTGTATACTGGACTGTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTTGTTTCATTTTCAGAGACAGAGTCTCCTGTATACTGGACTGTG  384

seq1  TGGCTGAAGATAGCCTCAAACTCATCCTGATCCTCCTGCTTCTACTTCTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGAAGATAGCCTCAAACTCATCCTGATCCTCCTGCTTCTACTTCTC  434

seq1  TGGGGTGGGGATTATAAGTATGCTGCTCCCCCACAGCTGTTTTATGGGGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGGGGATTATAAGTATGCTGCTCCCCCACAGCTGTTTTATGGGGT  484

seq1  GCCAGGGTCTGAACCCAGGGCTTTCTGCACAAGCCCTGGCATAAGCAAGC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGGGTCTGAACCCAGGGCTTTCTGCACAAGCCCTGGCATAAGCAAGC  534

seq1  TTCCTGCATGAGCAAGCACTCTACCAAATGAGCTGTATTCCCAGCCCCTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCATGAGCAAGCACTCTACCAAATGAGCTGTATTCCCAGCCCCTC  584

seq1  ATTCATTTATGTTTACAGCTGCTTTGTGCTACAGAGATGCATGCACTGTC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTATGTTTACAGCTGCTTTGTGCTACAGAGATGCATGCACTGTC  634

seq1  TGGTCACAAATTCTCAAATGCGGACAGGATATGTGCTGGCGTTTTACCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACAAATTCTCAAATGCGGACAGGATATGTGCTGGCGTTTTACCTA  684

seq1  AAATATCCTCCCAAAAGCTATGAAATGACATGTTTGTATGCATGCACACA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATCCTCCCAAAAGCTATGAAATGACATGTTTGTATGCATGCACACA  734

seq1  TTCATGCATGCATCTTCAAGAAGACTTTTGGATTGGCACAACAGGAGTCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGCATGCATCTTCAAGAAGACTTTTGGATTGGCACAACAGGAGTCA  784

seq1  GGAAGGACAAAATAGATTTTTCTTTTTCCCTATGGAACAGACACAGGTTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGACAAAATAGATTTTTCTTTTTCCCTATGGAACAGACACAGGTTG  834

seq1  ACACCGAGTCCTAAGAGAGAAAGGGACGCCATCAAGGACAAGATAGCTGC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCGAGTCCTAAGAGAGAAAGGGACGCCATCAAGGACAAGATAGCTGC  884

seq1  AGTGGCAGCAGTGTGGCTCTGGTGTCCTTCCCTGGATGTTTACACAAAGG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCAGCAGTGTGGCTCTGGTGTCCTTCCCTGGATGTTTACACAAAGG  934

seq1  GTCCAGGCCTTTCAAGTCAGTCCTTTGCCAAAGCTCAGCCAGGAGTCATC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGGCCTTTCAAGTCAGTCCTTTGCCAAAGCTCAGCCAGGAGTCATC  984

seq1  GCATGCGGCTGTGGCGCCCTGTTATTAGACACGCTGTGTGTACTCACTTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGCGGCTGTGGCGCCCTGTTATTAGACACGCTGTGTGTACTCACTTG  1034

seq1  GAAAAGCTGGACGTTAGCTGGAGGATCCTTCTGAAAGAGCAGGGTGGCGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGCTGGACGTTAGCTGGAGGATCCTTCTGAAAGAGCAGGGTGGCGC  1084

seq1  TGGCAAAGGTGGGGTCCAGTTTACCACACATCTGTGGAAGTGAGATAACA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAAAGGTGGGGTCCAGTTTACCACACATCTGTGGAAGTGAGATAACA  1134

seq1  GGGAATTC  1157
      ||||||||
seq2  GGGAATTC  1142

seq1: chr17_74123156_74123368
seq2: B6Ng01-134I17.g_74_286

seq1  CAAGACAGTCAGGAACTTGTCTCAAAGAGATACAAGAAAAAAAGACAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACAGTCAGGAACTTGTCTCAAAGAGATACAAGAAAAAAAGACAAAG  50

seq1  AAAAAAATCTTTCTGACCAAAAGCAAGTTGGGGGCAGAGGGGAGGAAGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATCTTTCTGACCAAAAGCAAGTTGGGGGCAGAGGGGAGGAAGGG  100

seq1  TTTATTTTGGCTTACAATTCCAAGTCACAGTCAGTCACTGTGTGGAAGTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTTGGCTTACAATTCCAAGTCACAGTCAGTCACTGTGTGGAAGTC  150

seq1  AAGGCAAGAACCTGGAGGCAGGAACCACAAAGGAACAGGACTAGATTCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCAAGAACCTGGAGGCAGGAACCACAAAGGAACAGGACTAGATTCAC  200

seq1  ATTGAATTCTTAA  213
      |||||||||||||
seq2  ATTGAATTCTTAA  213