BAC Information

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BAC

Clone NameB6Ng01-135F07
Chromosome17 (Build37)
Map Location 45,769,363 - 45,906,756
singlet/doubletdoublet
Overlap geneCapn11, Tmem63b, Mrpl14, LOC100043363
Upstream geneRunx2, Supt3h, 4930564C03Rik, EG210562, EG668314, Cdc5l, Spats1, EG668319, Aars2, Tcte1, Gm323, Nfkbie, Slc35b2, Hsp90ab1, Slc29a1, EG653016
Downstream geneVegfa, Mrps18a, 1700027N10Rik, Mad2l1bp, Gtpbp2, Polh, Xpo5, Rpo1-1, Yipf3, Gm88, Tjap1, Egfl9, Abcc10, BC040756, Zfp318, LOC677168, Crip3, Slc22a7, EG328825, Ttbk1, BC048355, Parc, Srf, Ptk7, Klc4, Mrpl2, Cul7, BC011248, Klhdc3, Mea1, Ppp2r5d, Pex6, Gnmt, Tnrc5, Ptcra
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-135F07.bB6Ng01-135F07.g
ACCDH935398DH935399
length696374
definitionDH935398|Mus musculus domesticus DNA, BAC clone: B6Ng01-135F07, 5' end.DH935399|Mus musculus domesticus DNA, BAC clone: B6Ng01-135F07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,906,061 - 45,906,756)(45,769,363 - 45,769,742)
sequence
gaattcaggggatctatgagagccaaagacagcatgttgggggcctcatc
tccagctcagggagcccccccaaaaaaacaagggtgaatatgggaactac
agtgagtactccttgagccccatcatgcaataaatatgtatattggtcaa
ggcttttaagctgattgaatggatatatattaggatctattagattgact
ttccaggctgggagtcccacataggctgttggcatgctaaagaggctgag
actcctgaggctactcagtgcaccgggctaggggcctcagcagtctgcag
tctgatgctgagggactggagggttcctgggagccaccaatccattggaa
gatgaagctgggttccaaacgcagggaaagatgtggtggtggatgtggca
gagtagatgtgtgcacccacagggagcaacctcaactgtgcttatctctc
agactcctttagagtggagcagccactgcctgaaaggaccacctactcta
gggagctcctctccttcagcgaatccttccaggaaatgccttggaacacc
cacccagagccacctcccatccgtcttggaacctaggtccaatcaagttg
aaaaaatcactgcccgtctgtaccagtttgcaggagctgctcaccaatgc
ttcggggaaagatggaggagggtggagaggaagagggaatggaaga
atgaagctccagcttgccagaaccatctttctagggagattagtcaagga
taagaggaaagagggcattctggggaagaggaaacaaaaggtgtccacag
tctacacaggcttggggttcctcaatgctaacagccagaactgggagctc
cagctacgccacccccctccccccagatctcttccctatcacagggaaag
ggcactgatgctggagggagagatggcagggagaagatgggaaacacccc
agtaggctagccacagggcagaaagatacatccaggaggttgatcatccg
gcgacagacttccaagctaaagcccttcgtcttgaagttccttactgtga
aggaggggtggggtgggaagaaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_45906061_45906756
seq2: B6Ng01-135F07.b_43_738 (reverse)

seq1  TCTTCCATTCCCTCTTCCTCTCCACCCTCCTCCATCTTTCCCCGAAGCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCATTCCCTCTTCCTCTCCACCCTCCTCCATCTTTCCCCGAAGCAT  50

seq1  TGGTGAGCAGCTCCTGCAAACTGGTACAGACGGGCAGTGATTTTTTCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGAGCAGCTCCTGCAAACTGGTACAGACGGGCAGTGATTTTTTCAAC  100

seq1  TTGATTGGACCTAGGTTCCAAGACGGATGGGAGGTGGCTCTGGGTGGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTGGACCTAGGTTCCAAGACGGATGGGAGGTGGCTCTGGGTGGGTG  150

seq1  TTCCAAGGCATTTCCTGGAAGGATTCGCTGAAGGAGAGGAGCTCCCTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAAGGCATTTCCTGGAAGGATTCGCTGAAGGAGAGGAGCTCCCTAGA  200

seq1  GTAGGTGGTCCTTTCAGGCAGTGGCTGCTCCACTCTAAAGGAGTCTGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTGGTCCTTTCAGGCAGTGGCTGCTCCACTCTAAAGGAGTCTGAGA  250

seq1  GATAAGCACAGTTGAGGTTGCTCCCTGTGGGTGCACACATCTACTCTGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGCACAGTTGAGGTTGCTCCCTGTGGGTGCACACATCTACTCTGCC  300

seq1  ACATCCACCACCACATCTTTCCCTGCGTTTGGAACCCAGCTTCATCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCACCACCACATCTTTCCCTGCGTTTGGAACCCAGCTTCATCTTCC  350

seq1  AATGGATTGGTGGCTCCCAGGAACCCTCCAGTCCCTCAGCATCAGACTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGATTGGTGGCTCCCAGGAACCCTCCAGTCCCTCAGCATCAGACTGC  400

seq1  AGACTGCTGAGGCCCCTAGCCCGGTGCACTGAGTAGCCTCAGGAGTCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGCTGAGGCCCCTAGCCCGGTGCACTGAGTAGCCTCAGGAGTCTCA  450

seq1  GCCTCTTTAGCATGCCAACAGCCTATGTGGGACTCCCAGCCTGGAAAGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTTTAGCATGCCAACAGCCTATGTGGGACTCCCAGCCTGGAAAGTC  500

seq1  AATCTAATAGATCCTAATATATATCCATTCAATCAGCTTAAAAGCCTTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTAATAGATCCTAATATATATCCATTCAATCAGCTTAAAAGCCTTGA  550

seq1  CCAATATACATATTTATTGCATGATGGGGCTCAAGGAGTACTCACTGTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATACATATTTATTGCATGATGGGGCTCAAGGAGTACTCACTGTAG  600

seq1  TTCCCATATTCACCCTTGTTTTTTTGGGGGGGCTCCCTGAGCTGGAGATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCATATTCACCCTTGTTTTTTTGGGGGGGCTCCCTGAGCTGGAGATG  650

seq1  AGGCCCCCAACATGCTGTCTTTGGCTCTCATAGATCCCCTGAATTC  696
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCCCAACATGCTGTCTTTGGCTCTCATAGATCCCCTGAATTC  696

seq1: chr17_45769363_45769742
seq2: B6Ng01-135F07.g_68_447

seq1  GAATTCATGAAGCTCCAGCTTGCCAGAACCATCTTTCTAGGGAGATTAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGAAGCTCCAGCTTGCCAGAACCATCTTTCTAGGGAGATTAGT  50

seq1  CAAGGATAAGAGGAAAGAGGGCATTCTGGGGAAGAGGAAACAAAAGGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGATAAGAGGAAAGAGGGCATTCTGGGGAAGAGGAAACAAAAGGTGT  100

seq1  CCACAGTCTACACAGGCTTGGGGTTCCTCAATGCTAACAGCCAGAACTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGTCTACACAGGCTTGGGGTTCCTCAATGCTAACAGCCAGAACTGG  150

seq1  GAGCTCCAGCTACGCCACCCCCCTCCCCCCAGATCTCTTCCCTATCACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCAGCTACGCCACCCCCCTCCCCCCAGATCTCTTCCCTATCACAG  200

seq1  GGAAAGGGCACTGATGCTGGAGGGAGAGATGGCAGGGAGAAGATGGGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGGGCACTGATGCTGGAGGGAGAGATGGCAGGGAGAAGATGGGAAA  250

seq1  CACCCCAGTAGGCTAGCCACAGGGCAGAAAGATACATCCAGGAGGTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCCAGTAGGCTAGCCACAGGGCAGAAAGATACATCCAGGAGGTTGAT  300

seq1  CATCCGGCGACAGACTTCCAAGCTAAAGCCCTTCGTCTTGAAGTTCCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCGGCGACAGACTTCCAAGCTAAAGCCCTTCGTCTTGAAGTTCCTTA  350

seq1  CTGTGAAGGAGGGGTGGGGTGGGAAGAAGA  380
      ||||||||||||||||||||||||||||||
seq2  CTGTGAAGGAGGGGTGGGGTGGGAAGAAGA  380