BAC Information

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BAC

Clone NameB6Ng01-139D08
Chromosome17 (Build37)
Map Location 37,041,291 - 37,226,146
singlet/doubletdoublet
Overlap geneTrim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90
Upstream gene2610110G12Rik, Mrps18b, LOC100043673, Ppp1r10, LOC100043674, LOC667766, Abcf1, Prr3, Gna-rs1, H2-T24, H2-T23, H2-T22, EG547347, LOC667782, H2-Bl, EG667792, C920025E04Rik, H2-T10, LOC630294, LOC672718, ENSMUSG00000073403, LOC675325, LOC626268, EG667977, LOC625785, H2-T3, LOC100043127, EG667827, LOC435525, LOC677333, LOC100043134, LOC625881, Rpp21, Trim39, H2-M10.2, H2-M10.1, H2-M10.3, Gm318, LOC100043140, LOC674152, LOC383240, LOC224752, H2-M10.4, H2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40
Downstream geneOlfr91, Olfr92, EG224763, LOC667973, Olfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139D08.bB6Ng01-139D08.g
ACCDH938252DH938253
length1,127795
definitionDH938252|Mus musculus domesticus DNA, BAC clone: B6Ng01-139D08, 5' end.DH938253|Mus musculus domesticus DNA, BAC clone: B6Ng01-139D08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,225,006 - 37,226,146)(37,041,291 - 37,042,060)
sequence
gaattccatcatttctaagatacctctgggttaggagatgattagaatca
catggctgaagtaatggggtcaaccatcctttacatcctgcttatcattt
tacactgtgataatcttctggattacaacactgttctgcctctgtggaga
gagtgtagatttgcatgtttaccactgctatggctgtcactcaacatacc
aaagaaccaatgtaggattctgccaactaccaaatatacacagtcagagc
ataaccatttgaactgggctagtggaacctatgttctcattatgattcat
cagatgaggggtagacaaatatctcaagagatctacaaacctaggatttg
aacatctgtattattattacaatatagaatatttcaaaggaattaagcag
aaagggaagaatttgagaagtgttaatggtatagtcctatatggatatat
gaaagaactaagaagatgtctggatggtgggtgaagaagagcagatgtga
cattggttattccaaatactatcttattgagagaaaggtagtgggtgaac
tattgacctactccagtggggactattgctggcatgcttcctccagaatc
ccatgcccctttaccataattacaagctaattaactgtctatgggctgtg
gaacccttgggtctcagctgaattaatgagctgtttctccacaggaaagg
aattctgggattcactctccacaaaataccatgtcaggctttccaccacc
aggaccactaacagatagtaacttttccatgtactgagggggtaagctct
ttgtataaaccttaatggaagagatgactctgccctaccttgacttcatt
tgtgctatataaaagagagtggattatagttgtttacacaactctgattg
cttacaaatatactcatttatcttattgatttcaactttctttgcttcaa
cttctcgtgttagaagatacagatatgcagagttgtaaaggatatgatgt
gtgtaacagtgtttaacaacagctgttagccttagttatagtatttgctg
aattacacagtggaaatacctcctagccagaagagctagctacattatta
ctacaggtctactatgaccatagatat
gaattccaggccaagtagagctactctgtttcaaaagaaaaatcagataa
aagtacatgtaataaaaacattctaaacattttatttaacccagtatttc
aaatataatcatttcagcctgcttaaacatattaatgagctatttcatat
tcttgagtggttttttggttctaagtctttgaatgctagtttgtcttttg
tacatttcaatttagatgccaaagtaccaattgtggaggtaaaatgtaat
tagttctactaaaccagtaaagtggcatttaactgaaagtgtatttgcaa
tgctttggtttttaaatttaggtttaaaatagtaaaaattaattttgggg
agtgatgtgatacactcttgtcctctcaacccttaggaatcagacacaga
gggattgttagttcaagactatcatccagggctggtgagatggctcagcg
gttaagggcactgactgctcttccagaggtcatcagttcaaatcccagca
accacataaacaaataaaaaaacctatgggctggagcgggggccagagtg
aacagggccagagctagagggaaaagagaagtggggaagccatggagagc
cactccatcctttatcctgacactgccaagctgagcttcctgtttctgta
ccagaggcaaaaaaacaaaaacaaaaatctgtgtcccaaatgtttctctt
tcttctctcctcattctgctcactctgttccttttgatgtttaaacactg
tcctgtctatatcaggagtttttttttttttgggggggggggtgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37225006_37226146
seq2: B6Ng01-139D08.b_46_1172 (reverse)

seq1  ATATCTA-GTGCATAGTAGTACCTGTTAGTAAATAAATGTTAGCTAGCCT  49
      ||||||| |  |||||||| ||||| ||||||   |||| ||||||| ||
seq2  ATATCTATGGTCATAGTAG-ACCTG-TAGTAA--TAATG-TAGCTAG-CT  44

seq1  CTTCCTTGCTAGGA-GTATTTCCACTGTGTAAATTCAGCAAATACTATAA  98
      ||| || ||||||| ||||||||||||||| ||||||||||||||||| |
seq2  CTT-CTGGCTAGGAGGTATTTCCACTGTGT-AATTCAGCAAATACTAT-A  91

seq1  ACTAAGGCTAACCAAGCTGGTTGTTAAACATCTGTTTACACACATCATTA  148
      ||||||||||||  |||| ||||||||||| ||| |||||||||||| ||
seq2  ACTAAGGCTAAC--AGCT-GTTGTTAAACA-CTG-TTACACACATCA-TA  135

seq1  TCCTTTACAACTCTGCATATCTGTATCTTCTTAACACGAGAAGTTGAAGC  198
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TCCTTTACAACTCTGCATATCTGTATCTTC-TAACACGAGAAGTTGAAGC  184

seq1  AAAGAAAGTTGAAATCAATAAGATAAATGAGTATATTTGTAAGCAATCAG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAGTTGAAATCAATAAGATAAATGAGTATATTTGTAAGCAATCAG  234

seq1  AGTTGTGTAAACAACTATAATCCACTCTCTTTTATATAGCACAAATGAAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGTAAACAACTATAATCCACTCTCTTTTATATAGCACAAATGAAG  284

seq1  TCAAGGTAGGGCAGAGTCATCTCTTCCATTAAGGTTTATACAAAGAGCTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGGTAGGGCAGAGTCATCTCTTCCATTAAGGTTTATACAAAGAGCTT  334

seq1  ACCCCCTCAGTACATGGAAAAGTTACTATCTGTTAGTGGTCCTGGTGGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCTCAGTACATGGAAAAGTTACTATCTGTTAGTGGTCCTGGTGGTG  384

seq1  GAAAGCCTGACATGGTATTTTGTGGAGAGTGAATCCCAGAATTCCTTTCC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCCTGACATGGTATTTTGTGGAGAGTGAATCCCAGAATTCCTTTCC  434

seq1  TGTGGAGAAACAGCTCATTAATTCAGCTGAGACCCAAGGGTTCCACAGCC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGAGAAACAGCTCATTAATTCAGCTGAGACCCAAGGGTTCCACAGCC  484

seq1  CATAGACAGTTAATTAGCTTGTAATTATGGTAAAGGGGCATGGGATTCTG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGACAGTTAATTAGCTTGTAATTATGGTAAAGGGGCATGGGATTCTG  534

seq1  GAGGAAGCATGCCAGCAATAGTCCCCACTGGAGTAGGTCAATAGTTCACC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGCATGCCAGCAATAGTCCCCACTGGAGTAGGTCAATAGTTCACC  584

seq1  CACTACCTTTCTCTCAATAAGATAGTATTTGGAATAACCAATGTCACATC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACCTTTCTCTCAATAAGATAGTATTTGGAATAACCAATGTCACATC  634

seq1  TGCTCTTCTTCACCCACCATCCAGACATCTTCTTAGTTCTTTCATATATC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTCTTCACCCACCATCCAGACATCTTCTTAGTTCTTTCATATATC  684

seq1  CATATAGGACTATACCATTAACACTTCTCAAATTCTTCCCTTTCTGCTTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAGGACTATACCATTAACACTTCTCAAATTCTTCCCTTTCTGCTTA  734

seq1  ATTCCTTTGAAATATTCTATATTGTAATAATAATACAGATGTTCAAATCC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTTGAAATATTCTATATTGTAATAATAATACAGATGTTCAAATCC  784

seq1  TAGGTTTGTAGATCTCTTGAGATATTTGTCTACCCCTCATCTGATGAATC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTTGTAGATCTCTTGAGATATTTGTCTACCCCTCATCTGATGAATC  834

seq1  ATAATGAGAACATAGGTTCCACTAGCCCAGTTCAAATGGTTATGCTCTGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGAGAACATAGGTTCCACTAGCCCAGTTCAAATGGTTATGCTCTGA  884

seq1  CTGTGTATATTTGGTAGTTGGCAGAATCCTACATTGGTTCTTTGGTATGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTATATTTGGTAGTTGGCAGAATCCTACATTGGTTCTTTGGTATGT  934

seq1  TGAGTGACAGCCATAGCAGTGGTAAACATGCAAATCTACACTCTCTCCAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGACAGCCATAGCAGTGGTAAACATGCAAATCTACACTCTCTCCAC  984

seq1  AGAGGCAGAACAGTGTTGTAATCCAGAAGATTATCACAGTGTAAAATGAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAGAACAGTGTTGTAATCCAGAAGATTATCACAGTGTAAAATGAT  1034

seq1  AAGCAGGATGTAAAGGATGGTTGACCCCATTACTTCAGCCATGTGATTCT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGGATGTAAAGGATGGTTGACCCCATTACTTCAGCCATGTGATTCT  1084

seq1  AATCATCTCCTAACCCAGAGGTATCTTAGAAATGATGGAATTC  1141
      |||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATCTCCTAACCCAGAGGTATCTTAGAAATGATGGAATTC  1127

seq1: chr17_37041291_37042060
seq2: B6Ng01-139D08.g_90_859

seq1  CTGTTTCAAAAGAAAAATCAGATAAAAGTACATGTAATAAAAACATTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTCAAAAGAAAAATCAGATAAAAGTACATGTAATAAAAACATTCTA  50

seq1  AACATTTTATTTAACCCAGTATTTCAAATATAATCATTTCAGCCTGCTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATTTTATTTAACCCAGTATTTCAAATATAATCATTTCAGCCTGCTTA  100

seq1  AACATATTAATGAGCTATTTCATATTCTTGAGTGGTTTTTTGGTTCTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATATTAATGAGCTATTTCATATTCTTGAGTGGTTTTTTGGTTCTAAG  150

seq1  TCTTTGAATGCTAGTTTGTCTTTTGTACATTTCAATTTAGATGCCAAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGAATGCTAGTTTGTCTTTTGTACATTTCAATTTAGATGCCAAAGT  200

seq1  ACCAATTGTGGAGGTAAAATGTAATTAGTTCTACTAAACCAGTAAAGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTGTGGAGGTAAAATGTAATTAGTTCTACTAAACCAGTAAAGTGG  250

seq1  CATTTAACTGAAAGTGTATTTGCAATGCTTTGGTTTTTAAATTTAGGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAACTGAAAGTGTATTTGCAATGCTTTGGTTTTTAAATTTAGGTTT  300

seq1  AAAATAGTAAAAATTAATTTTGGGGAGTGATGTGATACACTCTTGTCCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAGTAAAAATTAATTTTGGGGAGTGATGTGATACACTCTTGTCCTC  350

seq1  TCAACCCTTAGGAATCAGACACAGAGGGATTGTTAGTTCAAGACTATCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACCCTTAGGAATCAGACACAGAGGGATTGTTAGTTCAAGACTATCAT  400

seq1  CCAGGGCTGGTGAGATGGCTCAGCGGTTAAGGGCACTGACTGCTCTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGCTGGTGAGATGGCTCAGCGGTTAAGGGCACTGACTGCTCTTCCA  450

seq1  GAGGTCATCAGTTCAAATCCCAGCAACCACATAAACAAATAAAAAAACCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCATCAGTTCAAATCCCAGCAACCACATAAACAAATAAAAAAACCT  500

seq1  ATGGGCTGGAGCGGGGGCCAGAGTGAACAGGGCCAGAGCTAGAGGGAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCTGGAGCGGGGGCCAGAGTGAACAGGGCCAGAGCTAGAGGGAAAA  550

seq1  GAGAAGTGGGGAAGCCATGGAGAGCCACTCCATCCTTTATCCTGACACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAGTGGGGAAGCCATGGAGAGCCACTCCATCCTTTATCCTGACACTG  600

seq1  CCAAGCTGAGCTTCCTGTTTCTGTACCAGAGGCAAAAAAACAAAAACAAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCTGAGCTTCCTGTTTCTGTACCAGAGGCAAAAAAACAAAAACAAA  650

seq1  AATCTGTGTCCCAAATGTTACTCTTTCTTCTCTCCTCATTCTGCTCACTC  700
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AATCTGTGTCCCAAATGTTTCTCTTTCTTCTCTCCTCATTCTGCTCACTC  700

seq1  TGTTCCTTTTGATGTTTAAACACTGTCCTGTCTATATCAGGAGTTTTTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTTTTGATGTTTAAACACTGTCCTGTCTATATCAGGAGTTTTTTT  750

seq1  TTTTTTTGGGGGGGGGGTGG  770
      |||||| |||||||||||||
seq2  TTTTTTGGGGGGGGGGGTGG  770