BAC Information

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BAC

Clone NameB6Ng01-140M10
Chromosome17 (Build37)
Map Location 10,172,467 - 10,331,834
singlet/doubletdoublet
Overlap genenone
Upstream genePde10a, 1700010I14Rik, EG667165, EG667170, LOC666143, 4932702K14Rik
Downstream geneQk, LOC675815, Pacrg, Park2, LOC100041113
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140M10.bB6Ng01-140M10.g
ACCDH939411DH939412
length1,105185
definitionDH939411|Mus musculus domesticus DNA, BAC clone: B6Ng01-140M10, 5' end.DH939412|Mus musculus domesticus DNA, BAC clone: B6Ng01-140M10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,172,467 - 10,173,586)(10,331,650 - 10,331,834)
sequence
gaattctctgcagctaaagagaagtgaggtgctgaacatcgctctgtgga
tggcaggaacttattaccatttgttaagtcacgtgtctctgaaacatctc
agcaaaaaccgacattatacaaaaagccacacttgatgtctctctgtaag
gtccatctggagggacccactgtcacagcacatgggagccagtgtgaatg
cccacaacatttagccagcatgggcaattcttacattttaatttagttac
tggtgggggagacatgtggcaatgtggaggaggtcagaggacagttgtcc
agagctgcttctctcttgcaagccccagggattgaacccaggttgtcaca
ctcactcagcaagcgacttcactcgctgagcaggtccctcatcgtgtctc
tgaaagagaagcgggattgactctaattggggctaatgtccaggagactc
acattcgttaacagccttgtcattcacctgacacacgccaggcagagtgt
ttctgtagcacaggttagctcctggttcttcccattcactcttgtgacag
tctaagccatgtaagaatttatagacaggtgataaaagactcatctatca
tctatctattatctatctatctatctatctatctatctatctatctatct
attgtccatccatttaccatctacccacaatctatcatctatctaccatc
tatctatctatctatcatctatctaccatttatctaccatctatctatca
tctatcatgtatctatctatcaatcatgtatctgtctgtctgtctgtctg
tctgtctacatagagtcttatgcatctcagtctggcctggaactctccat
gtaactaagatgaccgtgaacatctggtccccctgcctctaccttccaag
tgtgtaaccacaggcaggcaccagcagtctgatttttgccatgctgggaa
atgtaactggaatttcatacactctagcaatactcagtgactgatatccc
agttcagcaacatatttgagaatgcagaagaggtatatgacgcttggtct
agaaaaggcgaacatttatgattaggccgaaatagtctgtcactggattt
cattc
aaatctcataaactcctcagacctctgacttgtgtaatgaaaattcagct
gctaaatccaattgagatccaggtaaacaagagaggaaaaggtgagcagg
aaagggtaaattaaatcatgaagcaaatgtcaagtagaggttgaagcaga
ggtctggcgggctggtggtggtggtggtggtggtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_10172467_10173586
seq2: B6Ng01-140M10.b_44_1148

seq1  GAATTCTCTGCAGCTAAAGAGAAGTGAGGTGCTGAACATCGCTCTGTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCAGCTAAAGAGAAGTGAGGTGCTGAACATCGCTCTGTGGA  50

seq1  TGGCAGGAACTTATTACCATTTGTTAAGTCACGTGTCTCTGAAACATCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGAACTTATTACCATTTGTTAAGTCACGTGTCTCTGAAACATCTC  100

seq1  AGCAAAAACCGACATTATACAAAAAGCCACACTTGATGTCTCTCTGTAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAAACCGACATTATACAAAAAGCCACACTTGATGTCTCTCTGTAAG  150

seq1  GTCCATCTGGAGGGACCCACTGTCACAGCACATGGGAGCCAGTGTGAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATCTGGAGGGACCCACTGTCACAGCACATGGGAGCCAGTGTGAATG  200

seq1  CCCACAACATTTAGCCAGCATGGGCAATTCTTACATTTTAATTTAGTTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACAACATTTAGCCAGCATGGGCAATTCTTACATTTTAATTTAGTTAC  250

seq1  TGGTGGGGGAGACATGTGGCAATGTGGAGGAGGTCAGAGGACAGTTGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGGGGGAGACATGTGGCAATGTGGAGGAGGTCAGAGGACAGTTGTCC  300

seq1  AGAGCTGCTTCTCTCTTGCAAGCCCCAGGGATTGAACCCAGGTTGTCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGCTTCTCTCTTGCAAGCCCCAGGGATTGAACCCAGGTTGTCACA  350

seq1  CTCACTCAGCAAGCGACTTCACTCGCTGAGCAGGTCCCTCATCGTGTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTCAGCAAGCGACTTCACTCGCTGAGCAGGTCCCTCATCGTGTCTC  400

seq1  TGAAAGAGAAGCGGGATTGACTCTAATTGGGGCTAATGTCCAGGAGACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAGAAGCGGGATTGACTCTAATTGGGGCTAATGTCCAGGAGACTC  450

seq1  ACATTCGTTAACAGCCTTGTCATTCACCTGACACACGCCAGGCAGAGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCGTTAACAGCCTTGTCATTCACCTGACACACGCCAGGCAGAGTGT  500

seq1  TTCTGTAGCACAGGTTAGCTCCTGGTTCTTCCCATTCACTCTTGTGACAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTAGCACAGGTTAGCTCCTGGTTCTTCCCATTCACTCTTGTGACAG  550

seq1  TCTAAGCCATGTAAGAATTTATAGACAGGTGATAAAAGACTCATCTATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGCCATGTAAGAATTTATAGACAGGTGATAAAAGACTCATCTATCA  600

seq1  TCTATCTATTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCT  650
      |||||||||    |||||||||||||||||||||||||||||||||||||
seq2  TCTATCTAT----TATCTATCTATCTATCTATCTATCTATCTATCTATCT  646

seq1  ATCTATTGTCCATCCATTTACCATCTACCCACAATCTATCATCTATCTAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATTGTCCATCCATTTACCATCTACCCACAATCTATCATCTATCTAC  696

seq1  CATCTATCTATCTATCTATCATCTATCTACCATTTATCTACCATCTATCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATCTATCTATCTATCATCTATCTACCATTTATCTACCATCTATCT  746

seq1  ATCATCTATCATGTATCTATCTATCAATCATGTATCTGTCTGTCTGTCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCTATCATGTATCTATCTATCAATCATGTATCTGTCTGTCTGTCTG  796

seq1  TCTGTCTGTCTACATAGAGTCTTATGCATCTCAGTCTGGCCTGGAACTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTCTACATAGAGTCTTATGCATCTCAGTCTGGCCTGGAACTCT  846

seq1  CCATGTAACTAAGGATGACCGTGAACATCTGGTCCCCCTGCCTCTACCTT  900
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CCATGTAACTAA-GATGACCGTGAACATCTGGTCCCCCTGCCTCTACCTT  895

seq1  CCAAGTGTGTAACCACAGGCAGGCACCAGCAGGTCTGATTTTTGCCATGC  950
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCAAGTGTGTAACCACAGGCAGGCACCAGCA-GTCTGATTTTTGCCATGC  944

seq1  TGGGAAATGTAACTGGAATTTCATACACTCTAAGCAAATACTCAAGTGAC  1000
      ||||||||||||||||||||||||||||||| ||| ||||||| ||||||
seq2  TGGGAAATGTAACTGGAATTTCATACACTCT-AGC-AATACTC-AGTGAC  991

seq1  TGATATCCCAGTCCAGCAAACATATTTGAG-ATGCAGGAAAGAGGTATAT  1049
      |||||||||||| |||| |||||||||||| ||||||  |||||||||||
seq2  TGATATCCCAGTTCAGC-AACATATTTGAGAATGCAG--AAGAGGTATAT  1038

seq1  GAACGCTGGGTCTAGAAAAGGCGGAACATCTATGATTAGGCCGGGACATA  1099
      | ||||| |||||||||||||| |||||| ||||||||||||  || |||
seq2  G-ACGCTTGGTCTAGAAAAGGC-GAACATTTATGATTAGGCC--GAAATA  1084

seq1  GTTCTGTCACT-GAGTTCATTC  1120
      | ||||||||| || |||||||
seq2  G-TCTGTCACTGGATTTCATTC  1105

seq1: chr17_10331650_10331834
seq2: B6Ng01-140M10.g_73_257 (reverse)

seq1  CACCACCACCACCACCACCACCAGCCCGCCAGACCTCTGCTTCAACCTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACCACCACCACCACCACCAGCCCGCCAGACCTCTGCTTCAACCTCT  50

seq1  ACTTGACATTTGCTTCATGATTTAATTTACCCTTTCCTGCTCACCTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGACATTTGCTTCATGATTTAATTTACCCTTTCCTGCTCACCTTTTC  100

seq1  CTCTCTTGTTTACCTGGATCTCAATTGGATTTAGCAGCTGAATTTTCATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTGTTTACCTGGATCTCAATTGGATTTAGCAGCTGAATTTTCATT  150

seq1  ACACAAGTCAGAGGTCTGAGGAGTTTATGAGATTT  185
      |||||||||||||||||||||||||||||||||||
seq2  ACACAAGTCAGAGGTCTGAGGAGTTTATGAGATTT  185