BAC Information

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BAC

Clone NameB6Ng01-143B18
Chromosome17 (Build37)
Map Location 11,726,309 - 11,843,029
singlet/doubletdoublet
Overlap genePark2
Upstream genePacrg, LOC100041113
Downstream geneAgpat4, Tdgf1-ps2, Map3k4, 4732491K20Rik, LOC625753, Plg, Slc22a3, LOC100041192, Slc22a2, Slc22a1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-143B18.bB6Ng01-143B18.g
ACCDH941132DH941133
length9891,128
definitionDH941132|Mus musculus domesticus DNA, BAC clone: B6Ng01-143B18, 5' end.DH941133|Mus musculus domesticus DNA, BAC clone: B6Ng01-143B18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(11,842,481 - 11,843,029)(11,726,309 - 11,727,442)
sequence
gaattcagtgtttggggttgggggtcctggctcaatgttatgatccagag
ctcagcttctcaaaatgtgggctgcaacttgtcatgtcatcatgaaactg
aatatggggtggacgtgggtttggcaatggtgaagtttctgaacagacaa
tggacaaacataaatttaaaaccaaattcacgatgaagccaagatgtttc
cagcattgctggcccatgctacacctgtgattttattgtagccttagttc
tgagcacatgatgagggcgggcactttgttcagtgagataccaacaatga
ctcctgaacaccatgtgcatcaggatttgagaccaccatgtgctgtgaag
tgctttttctgtgcacacaagaagtctttgctcttacagcgatcacaaat
aacaatgacatctattttctaccgccattacgtggtatgtaaaccacaca
ttagtatatctctggacagtactatgctagggggcttgatttttaaaaaa
ttgttgtctgatttgctgccttgagttttgttttaaaacaattaattgaa
tttggcttaggtttaggatagaattcccaataactttgaaaatgacccta
gacataattctatcatttgggggctgcatatttatgtgaagtggaattct
cagcactgaaagctataaaacaaaacaaacaaacaaaaagatcaactctg
agacatgctgaaggtgttctgtatcttactggaccaaatattcagccagg
tttcagttcttcatatgcagataatatatccctctcactgctctgtgtac
ttgggtttcaattttaaatagatggtaagataattttttgcataccagag
aattcctttaaacaaatttctgataattcattctcattcatgttagattt
ttgcaactattttatatgcataaatatttgtgactacataaaaattcgtg
ggtaaaaagggtcagtataacaaaaattgaggaacccaa
gaattccatctacagtagttataaatgtaattaacctttatctttttatt
aatgtaatatacggatgtatgtatttcatccctatagattcttaggatgt
tttcaacgtgaaacttggggccctatgttcccagtgtcagatttagttgt
gacatattcacagttgtgttagagagaaactgcatttttctcaatctgga
acactttgaaatcatgcaagcactctgaagtatatgcattcatgtatgtt
tggcaggtctgttattgtacttcttaagatcatgccaattagaaagaggg
gagactatttaaatatagcctaaaagtcatcaataaattataaggccatc
tgcatgcataaatatagctgtccagcagctctggatgaacctgaagggga
agctggaaatgaaaaaggatgggtgggcgagagaaggatgaagccaagac
aaaagtttctgatcaaagctcaaagtttagttttcagctctgtatttata
tagtgaaagcccacagacccatcctttgtttcagctggattgagatgcaa
agcaagctcagcaggcagtcaacttctcaaagcacagtagggaattgcaa
atgcagcaaggccaggttgtaaaaaccatgaggggtggggttgtttagcc
tactcaaggctggggggaagggcacacataaatgtaattttacttaataa
atattatttatccttgtctcaactaccttaagctttaattatctgtctac
cagtaactctagagcagtgtctttagagttaaattttctcatgtattaaa
gtcattcttctgtgacaaagatgagtcattgtctcttgcagaggaggagg
taacaccagagtgccttttctctgcaggctccagtgattgggtttggcca
ggaagactgatttgtcccacttattcatggtctcctgtggaggcaggtat
cagtgtgtttcagaagcttatatgtttctgtcttaaagtctgatccttcg
tcagtttccaggactgcccatgtttacggatgactactaagctcttggtc
aattttaaaagaacaggtgaattttacttcctgaaagaaacagggatcct
ttgggcgtccttttactgaccatagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_11842481_11843029
seq2: B6Ng01-143B18.b_45_593 (reverse)

seq1  TCAATTAATTGTTTTAAAACAAAACTCAAGGCAGCAAATCAGACAACAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTAATTGTTTTAAAACAAAACTCAAGGCAGCAAATCAGACAACAAT  50

seq1  TTTTTAAAAATCAAGCCCCCTAGCATAGTACTGTCCAGAGATATACTAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAAAAATCAAGCCCCCTAGCATAGTACTGTCCAGAGATATACTAAT  100

seq1  GTGTGGTTTACATACCACGTAATGGCGGTAGAAAATAGATGTCATTGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTTTACATACCACGTAATGGCGGTAGAAAATAGATGTCATTGTTA  150

seq1  TTTGTGATCGCTGTAAGAGCAAAGACTTCTTGTGTGCACAGAAAAAGCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGATCGCTGTAAGAGCAAAGACTTCTTGTGTGCACAGAAAAAGCAC  200

seq1  TTCACAGCACATGGTGGTCTCAAATCCTGATGCACATGGTGTTCAGGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACAGCACATGGTGGTCTCAAATCCTGATGCACATGGTGTTCAGGAGT  250

seq1  CATTGTTGGTATCTCACTGAACAAAGTGCCCGCCCTCATCATGTGCTCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTGGTATCTCACTGAACAAAGTGCCCGCCCTCATCATGTGCTCAG  300

seq1  AACTAAGGCTACAATAAAATCACAGGTGTAGCATGGGCCAGCAATGCTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGGCTACAATAAAATCACAGGTGTAGCATGGGCCAGCAATGCTGG  350

seq1  AAACATCTTGGCTTCATCGTGAATTTGGTTTTAAATTTATGTTTGTCCAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATCTTGGCTTCATCGTGAATTTGGTTTTAAATTTATGTTTGTCCAT  400

seq1  TGTCTGTTCAGAAACTTCACCATTGCCAAACCCACGTCCACCCCATATTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTGTTCAGAAACTTCACCATTGCCAAACCCACGTCCACCCCATATTC  450

seq1  AGTTTCATGATGACATGACAAGTTGCAGCCCACATTTTGAGAAGCTGAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCATGATGACATGACAAGTTGCAGCCCACATTTTGAGAAGCTGAGC  500

seq1  TCTGGATCATAACATTGAGCCAGGACCCCCAACCCCAAACACTGAATTC  549
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGATCATAACATTGAGCCAGGACCCCCAACCCCAAACACTGAATTC  549

seq1: chr17_11726309_11727442
seq2: B6Ng01-143B18.g_67_1194

seq1  GAATTCCATCTACAGTAGTTATAAATGTAATTAACCTTTATCTTTTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATCTACAGTAGTTATAAATGTAATTAACCTTTATCTTTTTATT  50

seq1  AATGTAATATACGGATGTATGTATTTCATCCCTATAGATTCTTAGGATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAATATACGGATGTATGTATTTCATCCCTATAGATTCTTAGGATGT  100

seq1  TTTCAACGTGAAACTTGGGGCCCTATGTTCCCAGTGTCAGATTTAGTTGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAACGTGAAACTTGGGGCCCTATGTTCCCAGTGTCAGATTTAGTTGT  150

seq1  GACATATTCACAGTTGTGTTAGAGAGAAACTGCATTTTTCTCAATCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATTCACAGTTGTGTTAGAGAGAAACTGCATTTTTCTCAATCTGGA  200

seq1  ACACTTTGAAATCATGCAAGCACTCTGAAGTATATGCATTCATGTATGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTTTGAAATCATGCAAGCACTCTGAAGTATATGCATTCATGTATGTT  250

seq1  TGGCAGGTCTGTTATTGTACTTCTTAAGATCATGCCAATTAGAAAGAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGGTCTGTTATTGTACTTCTTAAGATCATGCCAATTAGAAAGAGGG  300

seq1  GAGACTATTTAAATATAGCCTAAAAGTCATCAATAAATTATAAGGCCATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTATTTAAATATAGCCTAAAAGTCATCAATAAATTATAAGGCCATC  350

seq1  TGCATGCATAAATATAGCTGTCCAGCAGCTCTGGATGAACCTGAAGGGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCATAAATATAGCTGTCCAGCAGCTCTGGATGAACCTGAAGGGGA  400

seq1  AGCTGGAAATGAAAAAGGATGGGTGGGCGAGAGAAGGATGAAGCCAAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGAAATGAAAAAGGATGGGTGGGCGAGAGAAGGATGAAGCCAAGAC  450

seq1  AAAAGTTTCTGATCAAAGCTCAAAGTTTAGTTTTCAGCTCTGTATTTATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTTCTGATCAAAGCTCAAAGTTTAGTTTTCAGCTCTGTATTTATA  500

seq1  TAGTGAAAGCCCACAGACCCATCCTTTGTTTCAGCTGGATTGAGATGCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAAGCCCACAGACCCATCCTTTGTTTCAGCTGGATTGAGATGCAA  550

seq1  AGCAAGCTCAGCAGGCAGTCAACTTCTCAAAGCACAGTAGGGAATTGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAGCTCAGCAGGCAGTCAACTTCTCAAAGCACAGTAGGGAATTGCAA  600

seq1  ATGCAGCAAGGCCAGGTTGTAAAAACCATGAGGGGTGGGGTTGTTTAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCAAGGCCAGGTTGTAAAAACCATGAGGGGTGGGGTTGTTTAGCC  650

seq1  TACTCAAGGCT-GGGGGAAGGGCACACATAAATGTAATTTTACTTAATAA  699
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  TACTCAAGGCTGGGGGGAAGGGCACACATAAATGTAATTTTACTTAATAA  700

seq1  ATATTATTTATCCTTGTCTCAACTACCTTAAGCTTTAATTATCTGTCTAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATTTATCCTTGTCTCAACTACCTTAAGCTTTAATTATCTGTCTAC  750

seq1  CAGTAACTCTAGAGCAGGTGTCTTTAGAGTTAAATTTTCTCATGTATTAA  799
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  CAGTAACTCTAGAGCA-GTGTCTTTAGAGTTAAATTTTCTCATGTATTAA  799

seq1  AGTCA-TCTTCTGTGACAAAGATGAGTCATTGTCTCTTGCAGAGGAGGAG  848
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATTCTTCTGTGACAAAGATGAGTCATTGTCTCTTGCAGAGGAGGAG  849

seq1  GTAACACCAGAGTGCC-TTTCTCTGCAGGCTCCAGTGATTGGGTTTTGCC  897
      |||||||||||||||| ||||||||||||||||||||||||||||| |||
seq2  GTAACACCAGAGTGCCTTTTCTCTGCAGGCTCCAGTGATTGGGTTTGGCC  899

seq1  AGG-AGACTGATTTGTCCCACCTTATCCATGGTCTCCTGTGGAAGGGCAG  946
      ||| |||||||||||||||| ||||| ||||||||||||||||  |||||
seq2  AGGAAGACTGATTTGTCCCA-CTTATTCATGGTCTCCTGTGGA--GGCAG  946

seq1  GTATCAGTGTGTTTCAAGAAGCTTATATGTTTCTGTCTTAAAGTCTGATC  996
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTATCAGTGTGTTTC-AGAAGCTTATATGTTTCTGTCTTAAAGTCTGATC  995

seq1  CTTCGCCAGTTTCCAGGACTGCCCATGTTTACGGATGACTTACTAAGCTC  1046
      ||||| ||||||||||||||||||||||||||||||||| ||||||||||
seq2  CTTCGTCAGTTTCCAGGACTGCCCATGTTTACGGATGAC-TACTAAGCTC  1044

seq1  TTGGTC-ATTTAAAGAGAACAGGTGATATTTTACCTCCTGAAAGACAACA  1095
      |||||| |||| || ||||||||||| ||||||| |||||||||| ||| 
seq2  TTGGTCAATTTTAAAAGAACAGGTGA-ATTTTACTTCCTGAAAGA-AAC-  1091

seq1  AGGGTTCCTTTGTGCTCCCTTTTACTTGACACATAGGGT  1134
      |||| ||||||| ||  |||||||| |||| ||||||||
seq2  AGGGATCCTTTGGGCGTCCTTTTAC-TGAC-CATAGGGT  1128