BAC Information

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BAC

Clone NameB6Ng01-146L14
Chromosome17 (Build37)
Map Location 59,969,547 - 60,164,829
singlet/doubletdoublet
Overlap genenone
Upstream gene2610034M16Rik, Nudt12, 4930505H01Rik, LOC100043537, LOC100043542
Downstream geneLOC100043549
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-146L14.bB6Ng01-146L14.g
ACCDH943789DH943790
length8651,130
definitionDH943789|Mus musculus domesticus DNA, BAC clone: B6Ng01-146L14, 5' end.DH943790|Mus musculus domesticus DNA, BAC clone: B6Ng01-146L14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,969,547 - 59,970,411)(60,163,695 - 60,164,829)
sequence
gaattcaaagataacatattcagtgtgttaaggagttattttcttaaagt
tacctcacatttttaaattttaggaaggatgtttagattttcatcgattg
gaaaaatatagaattcatataatcagtgagatgcagaaggaaagagagca
gaaaggaagaacatggtcagaggacatatactactaaagatgtcagagta
aaactcatcatttcataaaattaatatgttctaatttaatgctattaaaa
taagttgacagtatgtttatagacaactaactataagacttgttagcctg
tcaatttatattcatacacacacacacacacacacacacacacacacaca
cacacacacacacatgatcagaggcaatataaacatatttttaacctgaa
tgcattcagtatactgtttcatattaccatgactttataacgtgacatat
tcctctcaagttttagccccacattctgttttaggaaattagagccttgc
tatgtagttaaagttagctacaaaattgtgttacacttgctgttgcctcc
caagtgctgggtaataaacatgtatgtccttacactgttttagaattcgc
caccatttaaaattatatagaatttgaaagactttagggtttgcaactcc
acaggaataacaacaatctcaaccaactacacccaccagagctcccaggg
actaaaccaccaaccaaggagtacatatggagggacccacggctccagct
gcatacgtagaagatggtctaatttggcataaatgggaggggaggccctt
ggttctgtaaagccccattttgggggaatgtgaggtcagagagaagggag
gtggtgggtgggtgg
gaattccaagtaggagagtggagtctgtagaggagaccacatgtaattac
agtcctcatatacgaaattctcaaaagatattttaaaaactttggttagt
gatgaaaacaaaatctaaattttagaaccgacaaaagtgtacccagtgaa
gttgtttaacctatcattcaatgctttatttatttgtttattttagtcct
tttactcaaatgatttctccttccaggtctatttgtattttcatataagg
aaatagtattaaagcttatttgtattactccatttctatgtgaaatttaa
agttaaccctaaagaaattaattggagtcatgacaactttatgattatta
ttagaaattcaaaaagcaatatagtgtatacaaattaaaatcgtataaaa
ctataggttgaatccacatttctggaactctttctaggaggtaaattaaa
cttcggatcaaggttaatgagtggttcaacaactcagcaagcaaaagtct
tcatgttagtgttataaatataggagctaatattcattgaattaagaaaa
atttgaattttgacttaagaaattgttttattcctaattatatttgtatt
ttttatactttcaaagagtactaactactaatgaagccagagaactatgt
ctaacaagtatgaaaatacggtaaaaactgttttttttctagaatgctca
aaacacagcagctgaatacctaatctataccctacatcacacagtaacaa
cttttagcatttttcaaatttccacaatatgtttatgtatacagttgaat
tttgtccgctttatctctctctctctctctctctctctcttctttttttt
ttttttttttgggtttttcgagacaggggtttttcataggccttggctgt
cttgaaactcattctgtagaccagaactcagaatctgcctgactctgcct
ctagagtgctgggattaaggcatgtgccaccacaccttgcttgtctttct
cttaaaacaccagtattttgcatgttactaaggagtatttggttagatat
tgattgctaagccctttgtgatacactattttttagagaatacaagaaca
ttgaaatgtatcattatttattggatgact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_59969547_59970411
seq2: B6Ng01-146L14.b_45_909

seq1  GAATTCAAAGATAACATATTCAGTGTGTTAAGGAGTTATTTTCTTAAAGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAGATAACATATTCAGTGTGTTAAGGAGTTATTTTCTTAAAGT  50

seq1  TACCTCACATTTTTAAATTTTAGGAAGGATGTTTAGATTTTCATCGATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCACATTTTTAAATTTTAGGAAGGATGTTTAGATTTTCATCGATTG  100

seq1  GAAAAATATAGAATTCATATAATCAGTGAGATGCAGAAGGAAAGAGAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATATAGAATTCATATAATCAGTGAGATGCAGAAGGAAAGAGAGCA  150

seq1  GAAAGGAAGAACATGGTCAGAGGACATATACTACTAAAGATGTCAGAGTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGAAGAACATGGTCAGAGGACATATACTACTAAAGATGTCAGAGTA  200

seq1  AAACTCATCATTTCATAAAATTAATATGTTCTAATTTAATGCTATTAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCATCATTTCATAAAATTAATATGTTCTAATTTAATGCTATTAAAA  250

seq1  TAAGTTGACAGTATGTTTATAGACAACTAACTATAAGACTTGTTAGCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTGACAGTATGTTTATAGACAACTAACTATAAGACTTGTTAGCCTG  300

seq1  TCAATTTATATTCATACACACACACACACACACACACACACACACACACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTATATTCATACACACACACACACACACACACACACACACACACA  350

seq1  CACACACACACACATGATCAGAGGCAATATAAACATATTTTTAACCTGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACATGATCAGAGGCAATATAAACATATTTTTAACCTGAA  400

seq1  TGCATTCAGTATACTGTTTCATATTACCATGACTTTATAACGTGACATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTCAGTATACTGTTTCATATTACCATGACTTTATAACGTGACATAT  450

seq1  TCCTCTCAAGTTTTAGCCCCACATTCTGTTTTAGGAAATTAGAGCCTTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCAAGTTTTAGCCCCACATTCTGTTTTAGGAAATTAGAGCCTTGC  500

seq1  TATGTAGTTAAAGTTAGCTACAAAATTGTGTTACACTTGCTGTTGCCTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAGTTAAAGTTAGCTACAAAATTGTGTTACACTTGCTGTTGCCTCC  550

seq1  CAAGTGCTGGGTAATAAACATGTATGTCCTTACACTGTTTTAGAATTCGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCTGGGTAATAAACATGTATGTCCTTACACTGTTTTAGAATTCGC  600

seq1  CACCATTTAAAATTATATAGAATTTGAAAGACTTTAGGGTTTGCAACTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCATTTAAAATTATATAGAATTTGAAAGACTTTAGGGTTTGCAACTCC  650

seq1  ACAGGAATAACAACAATCTCAACCAACTACACCCACCAGAGCTCCCAGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAATAACAACAATCTCAACCAACTACACCCACCAGAGCTCCCAGGG  700

seq1  ACTAAACCACCAACCAAGGAGTACATATGGAGGGACCCACGGCTCCAGCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAACCACCAACCAAGGAGTACATATGGAGGGACCCACGGCTCCAGCT  750

seq1  GCATACGTAGAAGATGGTCTAATTTGGCATAAATGGGAGGGGAGGCCCTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACGTAGAAGATGGTCTAATTTGGCATAAATGGGAGGGGAGGCCCTT  800

seq1  GGTTCTGTAAAGCCCCATTTTGGGGGAATGTGAGGTCAGAGAGAAGGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCTGTAAAGCCCCATTTTGGGGGAATGTGAGGTCAGAGAGAAGGGAG  850

seq1  GTGGTGGGTGGGTGG  865
      |||||||||||||||
seq2  GTGGTGGGTGGGTGG  865

seq1: chr17_60163695_60164829
seq2: B6Ng01-146L14.g_63_1192 (reverse)

seq1  AGTCATCTAAATAAATAATGATATCATTTCAATGCTCTTTTGTATTCTAT  50
      |||||||  |||||||||||||| |||||||||| ||  ||||||||| |
seq2  AGTCATC-CAATAAATAATGATA-CATTTCAATGTTC--TTGTATTCTCT  46

seq1  AAAAAATATGATGTATCAACAAAGGGCTTAAGGCAATC-ATATCTAACCA  99
      ||||||||   |||||| ||||||||||||  |||||| |||||||||||
seq2  AAAAAATA--GTGTATC-ACAAAGGGCTTA--GCAATCAATATCTAACCA  91

seq1  AGTACTCTCTAGTAACATGC-AAATACTGGTGTTTTAAGAGAAAGACTAG  148
      | |||||  ||||||||||| |||||||||||||||||||||||||| ||
seq2  AATACTCCTTAGTAACATGCAAAATACTGGTGTTTTAAGAGAAAGACAAG  141

seq1  CCAGGTGTGGTGGCACATGCCTTTAATCCCAGCACTCTAGAGGCAGAGTC  198
      | ||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CAAGGTGTGGTGGCACATGCC-TTAATCCCAGCACTCTAGAGGCAGAGTC  190

seq1  AGGCAGATTTCTGAGTTCTGGTCTACAGAGTGAGTTCCAGGACAGCC-AG  247
      ||||||| ||||||||||||||||||||| |||||| || ||||||| ||
seq2  AGGCAGA-TTCTGAGTTCTGGTCTACAGAATGAGTTTCAAGACAGCCAAG  239

seq1  GGCTATGAGAAA-CCCTGTCTCGAAAAA-CCAAAAAAAAAAAAAAAAAAG  295
      | |||||| ||| ||||||||||||||| |||||||||||||||||||||
seq2  GCCTATGAAAAACCCCTGTCTCGAAAAACCCAAAAAAAAAAAAAAAAAAG  289

seq1  AAGAGAGAGAGAGAGAGAGAGAGAGAGATAAAGACGGAC-ATATTC-ACT  343
      ||||||||||||||||||||||||||||||||| ||||| | |||| |||
seq2  AAGAGAGAGAGAGAGAGAGAGAGAGAGATAAAG-CGGACAAAATTCAACT  338

seq1  GTATACATAAACATATTGTGGAAATTTGAATAATGCTAAAAGTTGTTACT  393
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTATACATAAACATATTGTGGAAATTTGAAAAATGCTAAAAGTTGTTACT  388

seq1  GTGTGATGTAGGGTATAGATTAGGTATTCAGCTGCTGTGTTTTGAGCATT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGATGTAGGGTATAGATTAGGTATTCAGCTGCTGTGTTTTGAGCATT  438

seq1  CTAGAAAAAAAACAGTTTTTACCGTATTTTCATACTTGTTAGACATAGTT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAAAAAAAACAGTTTTTACCGTATTTTCATACTTGTTAGACATAGTT  488

seq1  CTCTGGCTTCATTAGTAGTTAGTACTCTTTGAAAGTATAAAAAATACAAA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCTTCATTAGTAGTTAGTACTCTTTGAAAGTATAAAAAATACAAA  538

seq1  TATAATTAGGAATAAAACAATTTCTTAAGTCAAAATTCAAATTTTTCTTA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATTAGGAATAAAACAATTTCTTAAGTCAAAATTCAAATTTTTCTTA  588

seq1  ATTCAATGAATATTAGCTCCTATATTTATAACACTAACATGAAGACTTTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATGAATATTAGCTCCTATATTTATAACACTAACATGAAGACTTTT  638

seq1  GCTTGCTGAGTTGTTGAACCACTCATTAACCTTGATCCGAAGTTTAATTT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGCTGAGTTGTTGAACCACTCATTAACCTTGATCCGAAGTTTAATTT  688

seq1  ACCTCCTAGAAAGAGTTCCAGAAATGTGGATTCAACCTATAGTTTTATAC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCCTAGAAAGAGTTCCAGAAATGTGGATTCAACCTATAGTTTTATAC  738

seq1  GATTTTAATTTGTATACACTATATTGCTTTTTGAATTTCTAATAATAATC  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTAATTTGTATACACTATATTGCTTTTTGAATTTCTAATAATAATC  788

seq1  ATAAAGTTGTCATGACTCCAATTAATTTCTTTAGGGTTAACTTTAAATTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTTGTCATGACTCCAATTAATTTCTTTAGGGTTAACTTTAAATTT  838

seq1  CACATAGAAATGGAGTAATACAAATAAGCTTTAATACTATTTCCTTATAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATAGAAATGGAGTAATACAAATAAGCTTTAATACTATTTCCTTATAT  888

seq1  GAAAATACAAATAGACCTGGAAGGAGAAATCATTTGAGTAAAAGGACTAA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATACAAATAGACCTGGAAGGAGAAATCATTTGAGTAAAAGGACTAA  938

seq1  AATAAACAAATAAATAAAGCATTGAATGATAGGTTAAACAACTTCACTGG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAACAAATAAATAAAGCATTGAATGATAGGTTAAACAACTTCACTGG  988

seq1  GTACACTTTTGTCGGTTCTAAAATTTAGATTTTGTTTTCATCACTAACCA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACACTTTTGTCGGTTCTAAAATTTAGATTTTGTTTTCATCACTAACCA  1038

seq1  AAGTTTTTAAAATATCTTTTGAGAATTTCGTATATGAGGACTGTAATTAC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTTTAAAATATCTTTTGAGAATTTCGTATATGAGGACTGTAATTAC  1088

seq1  ATGTGGTCTCCTCTACAGACTCCACTCTCCTACTTGGAATTC  1135
      ||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGTCTCCTCTACAGACTCCACTCTCCTACTTGGAATTC  1130