BAC Information

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BAC

Clone NameB6Ng01-147F07
Chromosome17 (Build37)
Map Location 76,027,082 - 76,139,407
singlet/doubletdoublet
Overlap geneLOC668787
Upstream geneBirc6, Ttc27, LOC100043672, Ltbp1, EG621988, Rasgrp3, 2810405J04Rik
Downstream geneLOC100043885, LOC100043886
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-147F07.bB6Ng01-147F07.g
ACCDH944243DH944244
length1,0571,098
definitionDH944243|Mus musculus domesticus DNA, BAC clone: B6Ng01-147F07, 5' end.DH944244|Mus musculus domesticus DNA, BAC clone: B6Ng01-147F07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(76,138,352 - 76,139,407)(76,027,082 - 76,028,188)
sequence
gaattcaattcattggaaatataagtttgctttacatgacaaatcaaaat
acacagcttttggtagtcatggagtaagattagttgctacactaaatcat
ggctgtgtgtactcatgaggatgttctgggttcttatatttttgccatca
tttgtgagagatgccttgaggtagagatgcatacagaaccgtcctttacc
cttcagaactgcctatacattataaatgactattaccctttaacttacag
atttgaatgtatttgataagccatctaaatagcatcatttggacttacaa
atagaaatgagctatctgcctgagtttatcggttgaatgatcccataagt
atgccttttacatctctattgtgatagcccatagtcagtagatgtgcagt
gatcccagaatatgcctcaaattgattaagaaaatgtaattgccacttac
agcaaagcagaggtctttgaagccacaaaaattggtgtgtgaccaccaat
tattcatcattatataaaccgttaagcttatggacagggcaatgtacaag
gctggctggaacacttggttcactgcaaattcatcaaaacagagtttaat
ctaatacatgtgttcaggaatgtaaggatggactgttttccccattcaga
attttatagtcctagaatcattagcacatcaatgacacaccttatcttgt
aaactgataaatgaacatgaatgacctgaacctcgaactttaagaaaaac
tatgtatagatggtttatataaaactgcagtgtctctaaatgaaataatg
acattttacaaaagtacaactgcatgtcgttatgtaatagtaaataagcc
agactcgatgtctttttttctttcattatttgctgtggcacatgaccaag
tcaatctatagaaggaagaatttactgggggttttcaagtcagaaggtga
ttacacgaacatgatggcagggatgcctctatcacacctctcccactcaa
agctcgggatctatagggaacagggaggagaaagatggcaaagcaagaag
tggtgga
gaattctttgtctgggaggccagataactccactttattcatgtaagttg
atgaaaatttatgttttgtttttaggaacatctttgcacaattcttcttt
tttccttgactctgtgttggcgtctgaggagttgccaaggcagacacttc
tcacagaagttaagaactggccttgactggaagcagatcctcaccaacag
ggctggtcagcggttctggaggacatctataaattattttattgctgcca
aatggtctcttctcaattacctggaactgtgtttgggaactgaattctgg
cgagaaggagatcaacatggctcggccagctttgaagtgcctggctttgt
gtttgtttaagatgtatcttttaattagttttttgaatttctcagactgg
gaatttatctgtgagcagttgctgagtccagatgttcatgggtgaaaggt
ggctctagagcttcatatcaaaccattttgctcgtcttcatggttggctt
tttttccatacaagtttttcttccctgaaatttgtgtagttctacttctt
agttaaaaaaatatacagactgatttgtgttttgtattaagagtacacgt
tatttaaattacttgtcctaaagatcatggctctggatgtgctagtattt
tccatatctctgatagctgtcagaaggaagtttcatttttcaagcaactc
ttaaaaggagagtcttcgtctttgagacactgctttcagaaatgctctcc
ctggacctggagcgcctgtctttagtggattagaagtatttactggaaat
gctggtgtgacatagcatttgaataagcactatcaacagtgtagcctatg
caatagtaatttataagtattgctgataatccaacgaaagaccatttgtt
agagatgaaggagcagcttgagaggcagctcagtgagtagagcacctttt
acagaggcatgaacatttgtggtctgatttcagcacctacaatttaaaaa
aacatggcattatgtaaccacacgtgtaactgtacttgtacacactgctt
tggtggagttcaggtcagaagaatcctctcaagaaaaatggggtgggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_76138352_76139407
seq2: B6Ng01-147F07.b_47_1103 (reverse)

seq1  TCCACCACTTCTGGCTTTTGCCATCTTTCTCCTCCCTGTTCCCTATAGAT  50
      |||||||||||| || ||||||||||||||||||||||||||||||||||
seq2  TCCACCACTTCTTGC-TTTGCCATCTTTCTCCTCCCTGTTCCCTATAGAT  49

seq1  CCCGAGCTTTGAGTGGGAGAGGTGTGATAGAGGCATCCCTGCCATCATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGAGCTTTGAGTGGGAGAGGTGTGATAGAGGCATCCCTGCCATCATGT  99

seq1  TCGTGTATTCACCTTCTGACTTGAAAACCCCCAGTAAATTCTTCCTTCTA  150
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGTAATCACCTTCTGACTTGAAAACCCCCAGTAAATTCTTCCTTCTA  149

seq1  TAGATTGACTTGGTCATGTGCCACAGC-AATAATGAAAG-AACAAAGACA  198
      ||||||||||||||||||||||||||| ||||||||||| || |||||||
seq2  TAGATTGACTTGGTCATGTGCCACAGCAAATAATGAAAGAAAAAAAGACA  199

seq1  TCGAGTCTGGCTTATTTACTATTACATAACGACATGCAGTTGTACTTTTG  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGAGTCTGGCTTATTTACTATTACATAACGACATGCAGTTGTACTTTTG  249

seq1  TAAAATGTCATTATTTCATTTAGAGACACTGCAGTTTTATATAAACCATC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGTCATTATTTCATTTAGAGACACTGCAGTTTTATATAAACCATC  299

seq1  TATACATAGTTTTTCTTAAAGTTCGAGGTTCAGGTCATTCATGTTCATTT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACATAGTTTTTCTTAAAGTTCGAGGTTCAGGTCATTCATGTTCATTT  349

seq1  ATCAGTTTACAAGATAAGGTGTGTCATTGATGTGCTAATGATTCTAGGAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTTTACAAGATAAGGTGTGTCATTGATGTGCTAATGATTCTAGGAC  399

seq1  TATAAAATTCTGAATGGGGAAAACAGTCCATCCTTACATTCCTGAACACA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATTCTGAATGGGGAAAACAGTCCATCCTTACATTCCTGAACACA  449

seq1  TGTATTAGATTAAACTCTGTTTTGATGAATTTGCAGTGAACCAAGTGTTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTAGATTAAACTCTGTTTTGATGAATTTGCAGTGAACCAAGTGTTC  499

seq1  CAGCCAGCCTTGTACATTGCCCTGTCCATAAGCTTAACGGTTTATATAAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCAGCCTTGTACATTGCCCTGTCCATAAGCTTAACGGTTTATATAAT  549

seq1  GATGAATAATTGGTGGTCACACACCAATTTTTGTGGCTTCAAAGACCTCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATAATTGGTGGTCACACACCAATTTTTGTGGCTTCAAAGACCTCT  599

seq1  GCTTTGCTGTAAGTGGCAATTACATTTTCTTAATCAATTTGAGGCATATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCTGTAAGTGGCAATTACATTTTCTTAATCAATTTGAGGCATATT  649

seq1  CTGGGATCACTGCACATCTACTGACTATGGGCTATCACAATAGAGATGTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGATCACTGCACATCTACTGACTATGGGCTATCACAATAGAGATGTA  699

seq1  AAAGGCATACTTATGGGATCATTCAACCGATAAACTCAGGCAGATAGCTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCATACTTATGGGATCATTCAACCGATAAACTCAGGCAGATAGCTC  749

seq1  ATTTCTATTTGTAAGTCCAAATGATGCTATTTAGATGGCTTATCAAATAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTATTTGTAAGTCCAAATGATGCTATTTAGATGGCTTATCAAATAC  799

seq1  ATTCAAATCTGTAAGTTAAAGGGTAATAGTCATTTATAATGTATAGGCAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAATCTGTAAGTTAAAGGGTAATAGTCATTTATAATGTATAGGCAG  849

seq1  TTCTGAAGGGTAAAGGACGGTTCTGTATGCATCTCTACCTCAAGGCATCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGGGTAAAGGACGGTTCTGTATGCATCTCTACCTCAAGGCATCT  899

seq1  CTCACAAATGATGGCAAAAATATAAGAACCCAGAACATCCTCATGAGTAC  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAAATGATGGCAAAAATATAAGAACCCAGAACATCCTCATGAGTAC  949

seq1  ACACAGCCATGATTTAGTGTAGCAACTAATCTTACTCCATGACTACCAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCCATGATTTAGTGTAGCAACTAATCTTACTCCATGACTACCAAA  999

seq1  AGCTGTGTATTTTGATTTGTCATGTAAAGCAAACTTATATTTCCAATGAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGTATTTTGATTTGTCATGTAAAGCAAACTTATATTTCCAATGAA  1049

seq1  TTGAATTC  1056
      ||||||||
seq2  TTGAATTC  1057

seq1: chr17_76027082_76028188
seq2: B6Ng01-147F07.g_72_1169

seq1  GAATTCTTTGTCTGGGAGGCCAGATAACTCCACTTTATTCATGTAAGTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTCTGGGAGGCCAGATAACTCCACTTTATTCATGTAAGTTG  50

seq1  ATGAAAATTTATGTTTTGTTTTTAGGAACATCTTTGCACAATTCTTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAATTTATGTTTTGTTTTTAGGAACATCTTTGCACAATTCTTCTTT  100

seq1  TTTCCTTGACTCTGTGTTGGCGTCTGAGGAGTTGCCAAGGCAGACACTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTGACTCTGTGTTGGCGTCTGAGGAGTTGCCAAGGCAGACACTTC  150

seq1  TCACAGAAGTTAAGAACTGGCCTTGACTGGAAGCAGATCCTCACCAACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAAGTTAAGAACTGGCCTTGACTGGAAGCAGATCCTCACCAACAG  200

seq1  GGCTGGTCAGCGGTTCTGGAGGACATCTATAAATTATTTTATTGCTGCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGTCAGCGGTTCTGGAGGACATCTATAAATTATTTTATTGCTGCCA  250

seq1  AATGGTCTCTTCTCAATTACCTGGAACTGTGTTTGGGAACTGAATTCTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTCTCTTCTCAATTACCTGGAACTGTGTTTGGGAACTGAATTCTGG  300

seq1  CGAGAAGGAGATCAACATGGCTCGGCCAGCTTTGAAGTGCCTGGCTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAAGGAGATCAACATGGCTCGGCCAGCTTTGAAGTGCCTGGCTTTGT  350

seq1  GTTTGTTTAAGATGTATCTTTTAATTAGTTTTTTGAATTTCTCAGACTGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTTTAAGATGTATCTTTTAATTAGTTTTTTGAATTTCTCAGACTGG  400

seq1  GAATTTATCTGTGAGCAGTTGCTGAGTCCAGATGTTCATGGGTGAAAGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTATCTGTGAGCAGTTGCTGAGTCCAGATGTTCATGGGTGAAAGGT  450

seq1  GGCTCTAGAGCTTCATATCAAACCATTTTGCTCGTCTTCATGGTTGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTAGAGCTTCATATCAAACCATTTTGCTCGTCTTCATGGTTGGCTT  500

seq1  TTTTTCCATACAAGTTTTTCTTCCCTGAAATTTGTGTAGTTCTACTTCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCATACAAGTTTTTCTTCCCTGAAATTTGTGTAGTTCTACTTCTT  550

seq1  AGTTAAAAAAATATACAGACTGATTTGTGTTTTGTATTAAGAGTACACGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAAAAATATACAGACTGATTTGTGTTTTGTATTAAGAGTACACGT  600

seq1  TATTTAAATTACTTGTCCTAAAGATCATGGCTCTGGATGTGCTAGTATTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTAAATTACTTGTCCTAAAGATCATGGCTCTGGATGTGCTAGTATTT  650

seq1  TCCATATCTCTGATAGCTGTCAGAAGGAAGTTTCATTTTTCAAGCAACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATCTCTGATAGCTGTCAGAAGGAAGTTTCATTTTTCAAGCAACTC  700

seq1  TTAAAAGGAGAGTCTTCGTCTTTGAGACACTGC-TTCAGAAATGCTCTCC  749
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTAAAAGGAGAGTCTTCGTCTTTGAGACACTGCTTTCAGAAATGCTCTCC  750

seq1  CTGGACCTGGAGCGCCTGTCTTTAGTGGATTAGAAGTATTTACTGGAAAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACCTGGAGCGCCTGTCTTTAGTGGATTAGAAGTATTTACTGGAAAT  800

seq1  GCTGGTGTGACATAGCATTTGAATAAGCACTATCAACAGTGTAGCCTATG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTGTGACATAGCATTTGAATAAGCACTATCAACAGTGTAGCCTATG  850

seq1  CAATAGTTAATTTATAAGTATTGCTGATAATCCAACGAAAGACCA-TTGT  898
      |||||| |||||||||||||||||||||||||||||||||||||| ||||
seq2  CAATAG-TAATTTATAAGTATTGCTGATAATCCAACGAAAGACCATTTGT  899

seq1  TAGAGATGAAGGAGCAGGCTTGAGAGGCAGCTCAGTGAGTAAGAGCACCT  948
      |||||||||||||||| ||||||||||||||||||||||| |||||||||
seq2  TAGAGATGAAGGAGCA-GCTTGAGAGGCAGCTCAGTGAGT-AGAGCACCT  947

seq1  TTTACAGAGGCATGAACATTTGTGGTCTGATTTCAGCACCTACAATTTAA  998
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTACAGAGGCATGAACATTTGTGGTCTGATTTCAGCACCTACAATTT-A  996

seq1  AAAAAACATGGCCATATGTAACCACACGTGTAACCTGTACCTGTAACCAC  1048
      ||||||||||||  ||||||||||||||||||| |||||| ||||  |||
seq2  AAAAAACATGGCATTATGTAACCACACGTGTAA-CTGTACTTGTA--CAC  1043

seq1  ACTGCTGTGGT-GAGTTCCAGGTTCAGTAAGAATCCCTTTCTCAAGAAAA  1097
      |||||| |||| ||||| |||| |||| ||||||||   |||||||||||
seq2  ACTGCTTTGGTGGAGTT-CAGG-TCAG-AAGAATCC---TCTCAAGAAAA  1087

seq1  A-ATGGTGGGG  1107
      |   |||||||
seq2  ATGGGGTGGGG  1098