BAC Information

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BAC

Clone NameB6Ng01-148L17
Chromosome17 (Build37)
Map Location 33,468,292 - 33,469,344
singlet/doubletsinglet
Overlap genenone
Upstream geneAkap8l, Wiz, A430107D22Rik, Pglyrp2, 4732474A20Rik, EG208285, Cyp4f16, LOC667178, LOC677156, EG631304, Cyp4f15, LOC623809, 9030612M13Rik, Zfp811, 6030490I01Rik, LOC631266, BC066107, Cyp4f14, Cyp4f13, 6030422M01Rik, Zfp472, C920016K16Rik, 1700065O13Rik, 4921501E09Rik, Zfp563, Morc2b, LOC100038859, LOC100038860, LOC100043474, Zfp422-rs1, Olfr63, LOC100043468
Downstream geneZfp81, Zfp101, 1700029I08Rik, LOC100042953, Adamts10, Myo1f, Zfp414, Pram1, Hnrpm, March2, Rab11b, Angptl4, Ankrd47, Rps28, Ndufa7, Cd320, LOC100042967, LOC630219, LOC100042970, BC051226, Daxx, Zbtb22, Tapbp, Rgl2, H2-Ke2, Wdr46, B3galt4, Rps18, Vps52, EG630499, LOC100042989, AA388235, H2-K1, LOC654352, Ring1, H2-Ke6, Slc39a7, Rxrb, Col11a2, LOC672505, H2-Pa, H2-Oa, Brd2, LOC100043003, LOC100043522, H2-DMa, H2-DMb2, H2-DMb1, Psmb9, Tap1, Psmb8, Tap2, H2-Ob, H2-Ab1, H2-Aa, H2-Eb1, H2-Eb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-148L17.bB6Ng01-148L17.g
ACCDH945259DH945260
length1,1601,046
definitionDH945259|Mus musculus domesticus DNA, BAC clone: B6Ng01-148L17, 5' end.DH945260|Mus musculus domesticus DNA, BAC clone: B6Ng01-148L17, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgcaccccatttttaaaataggttaatttgtt
tctctggagtctaacttcttaagttcttttatatattggatattagctct
ctatcagatgtaggattggtaaagatattttcccaatctgttggtggcct
ttttgtcttcttgacggtgtcctttgccttacagaagctttacaatttta
tgaggtcccagttatcaattcttgatcttatatcacaagccattgatgtt
ctgctccggaaattttcccctgtgcttatatgttcgaggctcttcaccaa
tttctcttctataagtttcagtgcatttggttttatgtgaaggtacttga
tccactaggacttgagcttcgtacaaggagataagaatgggtcgatatgc
attcttctacatgataaccaccagttgagtgagccattttgaaaatgctg
tctttttttccaatggatgcttttagcttctcctttgtcaaagatcaaat
gactataggtgtgtgagttcatttctgggtcttcaattctattccattga
tcttcctgcctgtcactgtaccagtactatgcagttttttgtcacgattg
ctctgtagtacagcttgaggtcaggcatggtgatgccacatgaggttctt
ttatccttgagaatagttttcggtatcctgtttttttttttttttgttat
tccagattaatttggaaattgttctttctaaatctatgaagaattgagtt
ggaattttgatggggattgcattgagtagctggatagcttttggcaagat
ggtcatttttactgtattgatcctaccaatccatgagcatggtacatctt
tccattttctgagatcttctttgatttctttctttagagaaagttcttat
tatacagatcttcctcagtagagtcacaccaagtattttatattatttgt
gactatttgtgaaggtgttgtttccttaattttttctcagcctgttatcc
tttgtgtagggcaggcactgacttgtttgagtatttatccagtttcttgc
tgagtatttatcaggtagaggttctcggggaatttggtcatttataacta
tacaatactctcaatgaattggacacctcttcagataatcccttgagact
ccttgcttct
gaattcatttgatgaaacaaatgaaatacaaatttcctatttacaaagtt
taatttcattaagaacctttattttgatccttgatttttcttattttggg
agtggtgggatcaaagccaaggtgaaaaagtttggtaaatgtttgaaagc
tttagttgttgttgttgtccttttgagacagggcgtagccctggcgtctt
ggaattctgtagaccaaggttagagatctgcctgcctctgcctcctgagt
actgggattaaaggcatctgctaccaccacctggcctacttatatttatt
tattttttgttcttttgtttttttgagacggtttctctataacagtttga
ttgtcccgacaccttgtaaaccaggctggctttgaactcaagagatcctc
ctgcttctgcatcttcagtgctgcgattcaaagcatgtgctatcactgcc
cactaaagatgaattttaactagctgtattccctactctgcctctttcta
gcccttccgcatgcaggagtgctgcactgtggagacaatatgtatacata
tacacaaaagtagcatgcactacatagtccaaatgaatgaatggtctagt
acaaaatacacatggtttgatgtttttaacgaactttatactaagtaaca
ctgtaggccaaaaagttaagtgttcaccagtttgttttaaatatacatct
cattcattccccccccaccccccccatttatcaggatgtatcaggatgca
atcttatggaatctaggaagcactggtattaatggaaaacacagttcagt
aaataatgaaatactgagttgacaccagggaaaacaagtccacacaattt
gggtctaaaggcctggcagtaggaaaggaagtaagtcttctcaggactag
gctagatgaaaaaagtgacatcctggacagatgtctgaaaatgcaaacat
atttgcatcatgaaacacaatcaccaccttttaaaatgagatcacttgga
ctcctgagtcactactctttggatcacaatcttctggtgaagacca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_33468292_33469344
seq2: B6Ng01-148L17.g_68_1113

seq1  GAATTCATTTGATGAAACAAATGAAATACAAATTTCCTATTTACAAAGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTGATGAAACAAATGAAATACAAATTTCCTATTTACAAAGTT  50

seq1  TAATTTCATTAAGAACCTTTATTTTGATCCTTGATTTTTCTTATTTTGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTCATTAAGAACCTTTATTTTGATCCTTGATTTTTCTTATTTTGGG  100

seq1  AGTGGTGGGATCAAAGCCAAGGTGAAAAAGTTTGGTAAATGTTTGAAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGTGGGATCAAAGCCAAGGTGAAAAAGTTTGGTAAATGTTTGAAAGC  150

seq1  TTTAGTTGTTGTTGTTGTCCTTTTGAGACAGGGCGTAGCCCTGGCGTCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTTGTTGTTGTTGTCCTTTTGAGACAGGGCGTAGCCCTGGCGTCTT  200

seq1  GGAATTCTGTAGACCAAGGTTAGAGATCTGCCTGCCTCTGCCTCCTGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCTGTAGACCAAGGTTAGAGATCTGCCTGCCTCTGCCTCCTGAGT  250

seq1  ACTGGGATTAAAGGCATCTGCTACCACCACCTGGCCTACTTATATTTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGATTAAAGGCATCTGCTACCACCACCTGGCCTACTTATATTTATT  300

seq1  TATTTTTTGTTCTTTTGTTTTTTTGAGACGGTTTCTCTATAACAGTTTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTTGTTCTTTTGTTTTTTTGAGACGGTTTCTCTATAACAGTTTGA  350

seq1  TTGTCCCGACACCTTGTAAACCAGGCTGGCTTTGAACTCAAGAGATCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCCCGACACCTTGTAAACCAGGCTGGCTTTGAACTCAAGAGATCCTC  400

seq1  CTGCTTCTGCATCTTCAGTGCTGCGATTCAAAGCATGTGCTATCACTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTCTGCATCTTCAGTGCTGCGATTCAAAGCATGTGCTATCACTGCC  450

seq1  CACTAAAGATGAATTTTAACTAGCTGTATTCCCTACTCTGCCTCTTTCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAAAGATGAATTTTAACTAGCTGTATTCCCTACTCTGCCTCTTTCTA  500

seq1  GCCCTTCCGCATGCAGGAGTGCTGCACTGTGGAGACAATATGTATACATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTCCGCATGCAGGAGTGCTGCACTGTGGAGACAATATGTATACATA  550

seq1  TACACAAAAGTAGCATGCACTACATAGTCCAAATGAATGAATGGTCTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAAAAGTAGCATGCACTACATAGTCCAAATGAATGAATGGTCTAGT  600

seq1  ACAAAATACACATGGTTTGATGTTTTTAACGAACTTTATACTAAGTAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATACACATGGTTTGATGTTTTTAACGAACTTTATACTAAGTAACA  650

seq1  CTGTAGGCCAAAAAGTTAAGTGTTCACCAGTTTGTTTTAAATATACATCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGGCCAAAAAGTTAAGTGTTCACCAGTTTGTTTTAAATATACATCT  700

seq1  CATTCATTCCCCCCCCACCCCCCCCATTTATCAGGATGTATCAGGATGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATTCCCCCCCCACCCCCCCCATTTATCAGGATGTATCAGGATGCA  750

seq1  ATCTTATGGAATCTAGGAAGCACTGGTATTAATGGAAAACACAGTTCAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATGGAATCTAGGAAGCACTGGTATTAATGGAAAACACAGTTCAGT  800

seq1  AAATAATGAAATACTGAGTTGACACCAGGGAAAACAAGTCCACACAA-TT  849
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAATAATGAAATACTGAGTTGACACCAGGGAAAACAAGTCCACACAATTT  850

seq1  GGGTCTAAAGGCCTGGCAGTAGGAAAAGGAAGTAAGTCTCCTCAGGAACT  899
      ||||||||||||||||||||||| ||||||||||||||| |||||| |||
seq2  GGGTCTAAAGGCCTGGCAGTAGG-AAAGGAAGTAAGTCTTCTCAGG-ACT  898

seq1  AGGCTAGATGAAAAAAGTGACATCCTGGACAGATGTCTGAAAATGCAAAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTAGATGAAAAAAGTGACATCCTGGACAGATGTCTGAAAATGCAAAC  948

seq1  ATAATTGCAATCATGAAAACACAATCACCACCTTTTAAAAATGAGATCAA  999
      ||| |||| |||||| |||||||||||||||||||| ||||||||||| |
seq2  ATATTTGC-ATCATG-AAACACAATCACCACCTTTT-AAAATGAGATC-A  994

seq1  CTTGGACTCCTGAGTCACTACTTCCTTTGTATCACAATCTTCCGGGTGAG  1049
      ||||||||||||||||||||||  ||||| |||||||||||| ||   ||
seq2  CTTGGACTCCTGAGTCACTACT--CTTTGGATCACAATCTTCTGGTGAAG  1042

seq1  ACCA  1053
      ||||
seq2  ACCA  1046