BAC Information

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BAC

Clone NameB6Ng01-149B14
Chromosome17 (Build37)
Map Location 83,673,632 - 83,674,781
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668836, EG433141, EG625514, LOC100043711, LOC100043900, AW548124
Downstream geneEG545226, Eml4, Cox7a2l, Kcng3, Mta3, Haao, Zfp36l2, Thada
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149B14.bB6Ng01-149B14.g
ACCDH945529DH945530
length1,1341,165
definitionDH945529|Mus musculus domesticus DNA, BAC clone: B6Ng01-149B14, 5' end.DH945530|Mus musculus domesticus DNA, BAC clone: B6Ng01-149B14, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccagaaccattgtcgatgctgtgagctgaccgggttggaagcct
ttgccaaggctgcctgggctgttctcacgggtgagtgtctagaggcagtt
ctggaaatgatgtctggatctctctcactgatggacaggcctgacctcag
cctcctgtcctcccagggttcagggggaacttatgcagaggagagagtcc
cctctccagacctttggctacttggatggcctgaaagggtgaaacataag
atacagcagcacttgggctttgagcttaaagtcactctgtcctgaaggca
gacagcttagtgaaagccatttctgtcctctgtctcaggctaggccactt
ataagccccatcggaatgaccaaatagtatcaatttgcatgaaaccagaa
ccttctaggctgtccaggaatgggggagcatggaagtaaaggggatcggg
aaaacggggctctaccaatacgaccaagatagacagacctagagccggga
caggaatgtccacgagtcggtgtggcctcgggagacacagagccaagccc
ccaggaccttcccatcctggatctgggtagcaggtggcaagtaccctctg
tgtgctggctccatattggccagctttgcctctggtctatgttgttagta
tcgggcctgcccaattccctcctcatccttcttattcattcaacaaacat
ttaagcagtctttatactggaaggtaaacactactagacggtaggtcccc
aaaggtatatgagattcaccagggccctggcgtggtgaagctaacatcta
actaggaagatacacggaaaagcttttgttcacaatccagtgtgagaaaa
gcctttgttcacaatccagtgtgaaagtccgatcgtatataggccatgga
aacggacaaagtgcaagacccaggggagaatccacagacatagagactat
tgacctggctgacattttgtggtgtgatctccattttcatcgtgtgggtc
tggggtttgactagatcgtcaagcctgggctcaagcactttacgggtggc
attctcacagcaaatgatttatcatcaaagcatcgtctcaaggcaggtag
agaaacagtctagatcggtcaccctgttccaggc
gaattctcacctgaggaataccgaatggcagagaagcaccagaaaaaatg
ttcaacatccttaatcatcagggaaatgcaactcaaaacaaccccgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgaaagc
agatgctggcgaggatgtggagaaagaggaacactccttcattgttgttg
ggattgcaagcttgtacaaccactctggaaatcagtttggcggttcctca
gaaaattggacatactaccagaggatccagcaatacttctcctgggcata
tatccagaagatgttccaactggtcagaaggacatatgctccactatgtt
cacagcagccttatttataatagccagaagctggaaagaacccagatgcc
cctcaacagtggaatggatacagaaaatgtggtacatttacacaatggag
tactactcagctattaaaaggaatgaatttatgaaattcctaggcaaatg
gatggacctggagggcatcatcctgagtggggtaacacaatcacaaagga
actcacacaatatgtactcactgataagtggatattagcccaaaaactta
ggatacccaagatataagatacaatttgttaaacgcatgaaactcaagaa
gaacgaagaccggacactgtgccccttcttagaattgggaacaaaacacc
catggaaagagttacagagacaaagtttggagctgtgacgaaaggatgga
ccatctaaagactgccatatccagggatccatcccataatcagcttccaa
atgctgacaccatcacatacactagcaagattttgctgaaaggacccaga
catagctgtctcttatgagacaatgccggggcctagcaaacacagaagtg
gaggctcacagtcagctattggatggatcacagggccccaatgggaggag
ctagagaaagtacccaaggagctaagggatctgcaccctattaggtggaa
caacattatgacttacagtacccgcagctcttgactttagctgcatatgg
tgtcaaagatggcctagtcggcatcactggagagaggcccattggacttg
ccaactttttatgtgttccagttacaggggaaatgcagggcaaaaaaatt
ggagtggtgtggtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_83673632_83674781
seq2: B6Ng01-149B14.b_47_1180

seq1  GAATTCCCAGAACCATTGTCGATGCTGTGAGCTGACCGGGTTGGAAGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCAGAACCATTGTCGATGCTGTGAGCTGACCGGGTTGGAAGCCT  50

seq1  TTGCCAAGGCTGCCTGGGCTGTTCTCACGGGTGAGTGTCTAGAGGCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCAAGGCTGCCTGGGCTGTTCTCACGGGTGAGTGTCTAGAGGCAGTT  100

seq1  CTGGAAATGATGTCTGGATCTCTCTCACTGATGGACAGGCCTGACCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAATGATGTCTGGATCTCTCTCACTGATGGACAGGCCTGACCTCAG  150

seq1  CCTCCTGTCCTCCCAGGGTTCAGGGGGAACTTATGCAGAGGAGAGAGTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGTCCTCCCAGGGTTCAGGGGGAACTTATGCAGAGGAGAGAGTCC  200

seq1  CCTCTCCAGACCTTTGGCTACTTGGATGGCCTGAAAGGGTGAAACATAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCAGACCTTTGGCTACTTGGATGGCCTGAAAGGGTGAAACATAAG  250

seq1  ATACAGCAGCACTTGGGCTTTGAGCTTAAAGTCACTCTGTCCTGAAGGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGCAGCACTTGGGCTTTGAGCTTAAAGTCACTCTGTCCTGAAGGCA  300

seq1  GACAGCTTAGTGAAAGCCATTTCTGTCCTCTGTCTCAGGCTAGGCCACTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCTTAGTGAAAGCCATTTCTGTCCTCTGTCTCAGGCTAGGCCACTT  350

seq1  ATAAGCCCCATCGGAATGACCAAATAGTATCAATTTGCATGAAACCAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCCCATCGGAATGACCAAATAGTATCAATTTGCATGAAACCAGAA  400

seq1  CCTTCTAGGCTGTCCAGGAATGGGGGAGCATGGAAGTAAAGGGGATCGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCTAGGCTGTCCAGGAATGGGGGAGCATGGAAGTAAAGGGGATCGGG  450

seq1  AAAACGGGGCTCTACCAATACGACCAAGATAGACAGACCTAGAGCCGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACGGGGCTCTACCAATACGACCAAGATAGACAGACCTAGAGCCGGGA  500

seq1  CAGGAATGTCCACGAGTCGGTGTGGCCTCGGGAGACACAGAGCCAAGCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAATGTCCACGAGTCGGTGTGGCCTCGGGAGACACAGAGCCAAGCCC  550

seq1  CCAGGACCTTCCCATCCTGGATCTGGGTAGCAGGTGGCAAGTACCCTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACCTTCCCATCCTGGATCTGGGTAGCAGGTGGCAAGTACCCTCTG  600

seq1  TGTGCTGGCTCCATATTGGCCAGCTTTGCCTCTGGTCTATGTTGTTAGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGGCTCCATATTGGCCAGCTTTGCCTCTGGTCTATGTTGTTAGTA  650

seq1  TCGGGCCTGCCCAATTCCCTCCTCATCCTTCTTATTCATTCAACAAACAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGGCCTGCCCAATTCCCTCCTCATCCTTCTTATTCATTCAACAAACAT  700

seq1  TTAAGCAGTCTTTATACTGGAAGGTAAACACTACTAGACGGTAGGTCCCC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCAGTCTTTATACTGGAAGGTAAACACTACTAGACGGTAGGTCCCC  750

seq1  AAAGGTATATGAGATTCACCAGGGCCCTGGCGTGGTGAAGCTAACATCTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTATATGAGATTCACCAGGGCCCTGGCGTGGTGAAGCTAACATCTA  800

seq1  ACTAGGAAGATACACGGAAAAGCTTTTGTTCACAATCCAGTGTGAGAAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGGAAGATACACGGAAAAGCTTTTGTTCACAATCCAGTGTGAGAAAA  850

seq1  GCCTTTGTTCACAATCCAGTGTGAAAGTCCGATCGTATATAGGCCATGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTGTTCACAATCCAGTGTGAAAGTCCGATCGTATATAGGCCATGGA  900

seq1  AACGGACAAAGTGCAAGACCCAGGGGAGAATCCACAGACAATAGAAGACT  950
      ||||||||||||||||||||||||||||||||||||||| |||| |||||
seq2  AACGGACAAAGTGCAAGACCCAGGGGAGAATCCACAGAC-ATAG-AGACT  948

seq1  ATTGACCTGGCTGAACATTTTGT-GTGTGATCTCCATTTTCATCGTGTGG  999
      ||||||||||||| ||||||||| ||||||||||||||||||||||||||
seq2  ATTGACCTGGCTG-ACATTTTGTGGTGTGATCTCCATTTTCATCGTGTGG  997

seq1  GTCCTGGGGTTTGAACTCAGATCGTCAGGCCTGGCCTCAAGCACCTTTAC  1049
      || |||||||||| ||| ||||||||| |||||| |||||||| ||||| 
seq2  GT-CTGGGGTTTG-ACT-AGATCGTCAAGCCTGGGCTCAAGCA-CTTTA-  1042

seq1  CGGGTGGGCCATCTCAACAGGCCAAATGTATTATCAATCAAAGCAATCGT  1099
      ||||| |||  |||| ||||  ||||||  ||||| |||||||| |||||
seq2  CGGGT-GGCATTCTC-ACAG--CAAATGATTTATC-ATCAAAGC-ATCGT  1086

seq1  CTCAAGGGAAAGTAGAGAGACAGTCTAGATCCGTCCACCCCTGTTCCAAG  1149
      ||||| || | ||||||| |||||||||||| |||   |||||||||| |
seq2  CTCAA-GGCAGGTAGAGAAACAGTCTAGATCGGTC--ACCCTGTTCCAGG  1133

seq1  C  1150
      |
seq2  C  1134