BAC Information

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BAC

Clone NameB6Ng01-149K11
Chromosome17 (Build37)
Map Location 51,968,487 - 51,969,538
singlet/doubletsinglet
Overlap geneSatb1
Upstream geneTbc1d5, LOC100043451, LOC100043452
Downstream geneEG628919, LOC672987, EG328839
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-149K11.bB6Ng01-149K11.g
ACCDH945935DH945936
length1,2351,059
definitionDH945935|Mus musculus domesticus DNA, BAC clone: B6Ng01-149K11, 5' end.DH945936|Mus musculus domesticus DNA, BAC clone: B6Ng01-149K11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggctgggaaaaca
attcttaacaataaaagaacagctgggggaatcaccatccctgacctcaa
gctttactacagagcaatagtaataaaaactgcatagtattggtacagag
acagacatgttgatcaatggaatagaattgaagacccagaaataaaacca
cacacttatgcacatttgatctttgacaaagaagccaaaatatacaatgg
aaagaaagaaagcatcttcaataaatgatgctcatctaaatggctgtctg
tatgaagaaaaatgaaaacagacccatatttgtcaccttgcacacatttc
aagttcaagtggatcaaggagcttaacataaaaccagatgcactgaatct
gatagaagagaaagtaggaaagagccttgaactcattggcacaaggaaat
ttccctaaacagaactccaatggctcacactctaagatcaaaaattgata
aatgggacctcatgaaactggaaagcttcagaaaggcaaaggacatagtc
aataagataaattggcaacctaaagattgagaaaaaaatattcactaacc
ccacatctgatagagggctaatatccaaaatatataaagaagtcaagaag
ctaaccacaaaaaaccaacaacccaataaaaaatggggtatagattaaaa
tcaagaattcacacagaaaatctcactggctgagaagccctaaggaatgt
tcaaagtccttagtatcagataaatgcaatcaaaccaccctgagattcca
cttacaccagcagaaggctaagatcgaactcaggtgacaaccatgttggt
gagaatggtgagaagagaaccacctcctccattgcttagtggattgccac
tcgtataaccacctggaactcactgagtgtactcgatgatgggagatcag
acataccgtatacctgctggaatattacctagaag
gaattcatctaaaatgtataaaaggccacttggcaaggttttccaggtaa
aacatgaacataatcaataatttgcaaaggaaaaagagggttgtttttaa
gaaaaaaaattttttgcattcaactacaatgatctagacataattagaag
attgatgtagccatattcatttatgtacttcatcagtaacaagtactaac
ataatattaattgcaatcatacaagataacatgtagggaagaaatggagt
gtttgtacacagggcttatctatgtatgtcctgtttagacatttacagag
taggtaaaaactactggagtgctttagagaatccctgttacatacccatg
ttatgtttagcttaacactgtttgtaaccaaaagctttctacaataatga
ggaacaggtgcctgtcacctgaccttttaggcctaatttacaacccacaa
cctgtcacatgaaaaaaaaaaagcattgagattccctcctagatttttca
gaccctgctagtttactgtggtgtttctcagctatcactcaacagcatca
tatcttactcagtcacaggttcatatagctggcaacagacttctttgaag
aataaaccaatattcatttttgtttgttgcttttgttgaaaatgccaaag
agacaaggaactactttttgtagattatcaaccaaagaagaatatattaa
tttattacaagggaacaaaaggcattccttttgaatacttttacatacaa
agaactattatttattacatatttcagcttgtgggaaagtaaaggaatgc
atttgattctggaaatagctatgtggatttggggagttctttaggtcttt
atcatttgttctcccttccctacctcgcatacattttaagaagctattac
ttcagagaggaaatccctatttgtcccttttcatctatcatctttattca
ttattcaggaaggaaaacaaaatttgagcagtgtttttatttctccttgc
ataaccttggttacatgtagccatttcaaatttaacaaaggctctgattt
tattgctac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_51968487_51969538
seq2: B6Ng01-149K11.g_70_1128

seq1  GAATTCATCTAAAATGTATAAAAGGCCACTTGGCAAGGTTTTCCAGGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTAAAATGTATAAAAGGCCACTTGGCAAGGTTTTCCAGGTAA  50

seq1  AACATGAACATAATCAATAATTTGCAAAGGAAAAAGAGGGTTGTTTTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAACATAATCAATAATTTGCAAAGGAAAAAGAGGGTTGTTTTTAA  100

seq1  GAAAAAAAATTTTTTGCATTCAACTACAATGATCTAGACATAATTAGAAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAAATTTTTTGCATTCAACTACAATGATCTAGACATAATTAGAAG  150

seq1  ATTGATGTAGCCATATTCATTTATGTACTTCATCAGTAACAAGTACTAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATGTAGCCATATTCATTTATGTACTTCATCAGTAACAAGTACTAAC  200

seq1  ATAATATTAATTGCAATCATACAAGATAACATGTAGGGAAGAAATGGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATTAATTGCAATCATACAAGATAACATGTAGGGAAGAAATGGAGT  250

seq1  GTTTGTACACAGGGCTTATCTATGTATGTCCTGTTTAGACATTTACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTACACAGGGCTTATCTATGTATGTCCTGTTTAGACATTTACAGAG  300

seq1  TAGGTAAAAACTACTGGAGTGCTTTAGAGAATCCCTGTTACATACCCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTAAAAACTACTGGAGTGCTTTAGAGAATCCCTGTTACATACCCATG  350

seq1  TTATGTTTAGCTTAACACTGTTTGTAACCAAAAGCTTTCTACAATAATGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTTAGCTTAACACTGTTTGTAACCAAAAGCTTTCTACAATAATGA  400

seq1  GGAACAGGTGCCTGTCACCTGACCTTTTAGGCCTAATTTACAACCCACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAGGTGCCTGTCACCTGACCTTTTAGGCCTAATTTACAACCCACAA  450

seq1  CCTGTCACATGAAAAAAAAAAAGCATTGAGATTCCCTCCTAGATTTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCACATGAAAAAAAAAAAGCATTGAGATTCCCTCCTAGATTTTTCA  500

seq1  GACCCTGCTAGTTTACTGTGGTGTTTCTCAGCTATCACTCAACAGCATCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCTGCTAGTTTACTGTGGTGTTTCTCAGCTATCACTCAACAGCATCA  550

seq1  TATCTTACTCAGTCACAGGTTCATATAGCTGGCAACAGACTTCTTTGAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTTACTCAGTCACAGGTTCATATAGCTGGCAACAGACTTCTTTGAAG  600

seq1  AATAAACCAATATTCATTTT--GTTGTTGCTTTTGTTGAAAATGCCAAAG  648
      ||||||||||||||||||||   |||||||||||||||||||||||||||
seq2  AATAAACCAATATTCATTTTTGTTTGTTGCTTTTGTTGAAAATGCCAAAG  650

seq1  AGACAAGGAACTAC-TTTTGTAGATTATCAACCAAAGAAGAATATATTAA  697
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AGACAAGGAACTACTTTTTGTAGATTATCAACCAAAGAAGAATATATTAA  700

seq1  TTTATTACAAGGGAACAAAAGGCATTCCTTTTGAATACTTTTACATACAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTACAAGGGAACAAAAGGCATTCCTTTTGAATACTTTTACATACAA  750

seq1  AGAACTATTATTTATTACATATTTCAGCTTGTGGGAAAGT-AAGGAATGC  796
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGAACTATTATTTATTACATATTTCAGCTTGTGGGAAAGTAAAGGAATGC  800

seq1  A-TTGATTCTGGAAATAGCTATGTGGATTTGGGAAGTTCTTTAGGTCTTT  845
      | ||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATTTGATTCTGGAAATAGCTATGTGGATTTGGGGAGTTCTTTAGGTCTTT  850

seq1  ATCA-TTGTTCTCCCTCCCCTACCTCGCATACATTTTAAGAAGCTATTAC  894
      |||| ||||||||||| |||||||||||||||||||||||||||||||||
seq2  ATCATTTGTTCTCCCTTCCCTACCTCGCATACATTTTAAGAAGCTATTAC  900

seq1  TTCAGGGAGGAAATCCCTATTTGTTCCTTTTTCATCCATCATCTGTATTC  944
      ||||| ||||||||||||||||| ||| |||||||| ||||||| |||||
seq2  TTCAGAGAGGAAATCCCTATTTG-TCCCTTTTCATCTATCATCTTTATTC  949

seq1  ATTATTCAGAAAGGAAAACAAAA-TTGAGCAGTGATTTTATTTCT-CTTG  992
      ||||||||| ||||||||||||| |||||||||| |||||||||| ||||
seq2  ATTATTCAGGAAGGAAAACAAAATTTGAGCAGTGTTTTTATTTCTCCTTG  999

seq1  CATAACCTT-GTTACATGTAGCCATATTCAAATTTAAC-AATGCTCTGTA  1040
      ||||||||| ||||||||||||||| |||||||||||| || |||||| |
seq2  CATAACCTTGGTTACATGTAGCCAT-TTCAAATTTAACAAAGGCTCTG-A  1047

seq1  TTTTATTGCTAC  1052
      ||||||||||||
seq2  TTTTATTGCTAC  1059