BAC Information

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BAC

Clone NameB6Ng01-150K21
Chromosome17 (Build37)
Map Location 82,569,634 - 82,570,719
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043700, LOC100043704, Slc8a1, EG668832, LOC100043707
Downstream geneLOC625467, LOC668836, EG433141, EG625514, LOC100043711, LOC100043900
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-150K21.bB6Ng01-150K21.g
ACCDH946699DH946700
length1,2051,083
definitionDH946699|Mus musculus domesticus DNA, BAC clone: B6Ng01-150K21, 5' end.DH946700|Mus musculus domesticus DNA, BAC clone: B6Ng01-150K21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagcgatatatcccatttttaaattgggttatttgggt
tgtttgtgtttaacttcttggcaggcttaaatatttcaaaacctactttt
ataagggtcgttgaatgctttaacatgccccctccttctagcctaccacc
caccagagataatggaaaggaaaagttaatagagcaaaggagtatgtgga
cctgtttaaaaagagatctttcgagaaaatacaatttttgttgtcaggac
accagcagttcagtttacaggaatcagcagcagcatcttgatccactcac
aaacaccattcaagaatcagcaatggtaggttaattcagaagaaacgttg
agtctctaacaattgcctgaatcagctgaggcagcaagaagtggctggaa
catcaccagaaattttttggtgcatttctctctataaagtcatgaccaat
gatgaccaggaaagaatggcaaggcataccaattccacccagcatcatta
atgaagaccagcaccaacaaagtccgttaatgaccagcaaaaaatggtaa
ggcatgccaatatcatccagcatcgtccacctgtctgttgggttacattt
atatcctttccaaacatcatatgttctctcaagcagctgctctagcaaaa
catcacatgccctttgtccaggttgcttccagaaaaacaccatgtctctg
ttcatagaaaaacattctccccttcagcaaaaatatcctctcatagacag
actccagaaaatcatcacatgataaaacagtctccaaagaaactaaagaa
ttctacgtcagttcttgaggggtttttgttgttgttgtttgtttgttttt
gttttttgtttataaaatttggatagtaaccctctaacagatataagttg
gtgaagatcctttcccaatctgtagactgccatttgtcctattaagagat
tcctttgccttatagaatattttcagtttcccgagatgccatttatttaa
actgtagaatctagagcctggccatggtattctgttcagaagaattgtct
ccttgcactaatgcatcaagccatttttacctttctctcctatgagatta
ggatattaggtttatgtggatgccttgattacctgggctgagaatggcag
gataaattaggtctatatgtattcttctcctagttgacactcctgttaaa
catgt
gaattccagacattgtacgaataaccagtgctttgatttactaaaattaa
gcattctgatttataaccagataaaattaaatcctgtaggaaagttttgt
gttctttttagaactacaatagactcatgattgcattaaaattctttccc
atggacagagtttcaaacttagatgttatgatttagtctgaagagctttt
aaatgtatttcctatctgtgatggttggtattgtcagcttcacaaactct
aaagtgacctagaagtcagttttgggggcacacccttaagggttaggtta
gcctctgggaatccctattggacattaatagagacagaatggcctgccca
ctgtgtatggtttgattcccagttggggtcctggattgtgtcaatgaaac
tatctgcagcatgtattcattgccctctgcttcacaattatgagtggggt
gtaggtaggcactccatgttcctgccatggtagacagtattcttgacctc
tgagccagaaaaattccttgcttccttacgctgattattttcagagtagg
ttgtcccagccgtaggacagtatccaaaaggaactcatgcatgcacaggg
aattttgaagtgctatcctaatcatcatcttgtaagaggttaaatgaccc
tttattgtgctatataacttcttttatccacttgcatttgcctattccaa
gatgagtgtgtctctttgcatgttatggtactagacaaaaataatttact
taaagtctggaaccatgaaccatagtttagagtaggcattgttcttcttt
ttaatatataaatctctctctctctctctctctgcatacatgatacccac
aaacacactttggcacttatataaaatggatggatatctttctgtactaa
aggtaaataaaggatttgaaaattgtggagataaatgaaatgccagtggg
tgtactgttcatgcatcccctcttctttctaaatgtttgcataatactgg
attagaaggtggtcttgtgttccatgtagtctgagaacatgggagccacc
ataccctgaaatctaggttttggtgtggagaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_82569634_82570719
seq2: B6Ng01-150K21.g_67_1149 (reverse)

seq1  TTTCTCCACA-CAAAACTTAGATTTCAAGGTAT-GTGGCTCCCATGTTCC  48
      |||||||||| |||||| ||||||||| ||||| |||||||||||||| |
seq2  TTTCTCCACACCAAAACCTAGATTTCAGGGTATGGTGGCTCCCATGTT-C  49

seq1  TCAGACTACATGGAACACAAGACCACCTTCTAATCCAGTAATTATTGCAA  98
      ||||||||||||||||||||||||||||||||||||||| |||| |||||
seq2  TCAGACTACATGGAACACAAGACCACCTTCTAATCCAGT-ATTA-TGCAA  97

seq1  ACATTTAGAAAGAAGA-GAGATGCATTGAACAGTACA-CCACTGGCATTT  146
      |||||||||||||||| | |||||| ||||||||||| ||||||||| ||
seq2  ACATTTAGAAAGAAGAGGGGATGCA-TGAACAGTACACCCACTGGCA-TT  145

seq1  TCATTTATCTCCACAATTTTCAAATCCTTTATTTTACCTTTAGTACAGAA  196
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCATTTATCTCCACAATTTTCAAATCCTTTA-TTTACCTTTAGTACAGAA  194

seq1  AGATATCCATCCATTTTTATATAAGTGCCAAAGTGTGTTTGTGGGTATCA  246
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  AGATATCCATCCA-TTTTATATAAGTGCCAAAGTGTGTTTGTGGGTATCA  243

seq1  TGTATGCAGAGAGAGAGAGAGAGAGAGATTTATATATTAAAAAGAAGAAC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCAGAGAGAGAGAGAGAGAGAGATTTATATATTAAAAAGAAGAAC  293

seq1  AATGCCTACTCTAAACTATGGTTCATGGTTCCAGACTTTAAGTAAATTAT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTACTCTAAACTATGGTTCATGGTTCCAGACTTTAAGTAAATTAT  343

seq1  TTTTGTCTAGTACCATAACATGCAAAGAGACACACTCATCTTGGAATAGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTCTAGTACCATAACATGCAAAGAGACACACTCATCTTGGAATAGG  393

seq1  CAAATGCAAGTGGATAAAAGAAGTTATATAGCACAATAAAGGGTCATTTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCAAGTGGATAAAAGAAGTTATATAGCACAATAAAGGGTCATTTA  443

seq1  ACCTCTTACAAGATGATGATTAGGATAGCACTTCAAAATTCCCTGTGCAT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCTTACAAGATGATGATTAGGATAGCACTTCAAAATTCCCTGTGCAT  493

seq1  GCATGAGTTCCTTTTGGATACTGTCCTACGGCTGGGACAACCTACTCTGA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGAGTTCCTTTTGGATACTGTCCTACGGCTGGGACAACCTACTCTGA  543

seq1  AAATAATCAGCGTAAGGAAGCAAGGAATTTTTCTGGCTCAGAGGTCAAGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATCAGCGTAAGGAAGCAAGGAATTTTTCTGGCTCAGAGGTCAAGA  593

seq1  ATACTGTCTACCATGGCAGGAACATGGAGTGCCTACCTACACCCCACTCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTCTACCATGGCAGGAACATGGAGTGCCTACCTACACCCCACTCA  643

seq1  TAATTGTGAAGCAGAGGGCAATGAATACATGCTGCAGATAGTTTCATTGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTGTGAAGCAGAGGGCAATGAATACATGCTGCAGATAGTTTCATTGA  693

seq1  CACAATCCAGGACCCCAACTGGGAATCAAACCATACACAGTGGGCAGGCC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATCCAGGACCCCAACTGGGAATCAAACCATACACAGTGGGCAGGCC  743

seq1  ATTCTGTCTCTATTAATGTCCAATAGGGATTCCCAGAGGCTAACCTAACC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTCTCTATTAATGTCCAATAGGGATTCCCAGAGGCTAACCTAACC  793

seq1  CTTAAGGGTGTGCCCCCAAAACTGACTTCTAGGTCACTTTAGAGTTTGTG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGGTGTGCCCCCAAAACTGACTTCTAGGTCACTTTAGAGTTTGTG  843

seq1  AAGCTGACAATACCAACCATCACAGATAGGAAATACATTTAAAAGCTCTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGACAATACCAACCATCACAGATAGGAAATACATTTAAAAGCTCTT  893

seq1  CAGACTAAATCATAACATCTAAGTTTGAAACTCTGTCCATGGGAAAGAAT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGACTAAATCATAACATCTAAGTTTGAAACTCTGTCCATGGGAAAGAAT  943

seq1  TTTAATGCAATCATGAGTCTATTGTAGTTCTAAAAAGAACACAAAACTTT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATGCAATCATGAGTCTATTGTAGTTCTAAAAAGAACACAAAACTTT  993

seq1  CCTACAGGATTTAATTTTATCTGGTTATAAATCAGAATGCTTAATTTTAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGGATTTAATTTTATCTGGTTATAAATCAGAATGCTTAATTTTAG  1043

seq1  TAAATCAAAGCACTGGTTATTCGTACAATGTCTGGAATTC  1086
      ||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAAAGCACTGGTTATTCGTACAATGTCTGGAATTC  1083