BAC Information

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BAC

Clone NameB6Ng01-153P21
Chromosome17 (Build37)
Map Location 72,261,406 - 72,262,484
singlet/doubletsinglet
Overlap geneAlk
Upstream geneLOC546695, LOC240156, Mylc2b, 2900073G15Rik, Myom1, Lpin2, Emilin2, LOC100043644, Smchd1, LOC100043879, Ndc80, LOC668740, Spdya, LOC623451, Wdr43, 4632412N22Rik, BC027072, Clip4
Downstream geneYpel5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153P21.bB6Ng01-153P21.g
ACCDH949153DH949154
length7071,083
definitionDH949153|Mus musculus domesticus DNA, BAC clone: B6Ng01-153P21, 5' end.DH949154|Mus musculus domesticus DNA, BAC clone: B6Ng01-153P21, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaaaagaggaaactattgcctgagaaacacatgaagaaatgtt
ccacaaccttagccatcggggaaatgcacatcaaaactacttaaagattt
catcttaaacccatcagaatggctaagatcaataaaagaagtgacagcag
atgctggcaaggatatggtgtaatggaaacattttcagttgctggtggaa
gtgcaaacttgcacagccactgtggaaattagggttcctaagaaagatag
gaattgatctacctcaagatctagctacaccactcttgggcatatcccta
aaggatgcttcatcctaccacagaggcacttgttgctctattcataacag
tcagaaattggaagcaaccttgatgtccctcaacagaataatgtatttaa
aaagtggtacatttatataatagcgtttattcagccattaaaagaaatga
aataatgaaattcacaggtaaacggatgagactagggaaaaaaaaatcat
cctgagtgaggtaacccagactcagaaagacaatatacagtatgtatttg
cttataggtggacattagtggttaaatcagtgataaataagccacaaccc
aagaactatagaggttaggtatagagtaatggactaaggggaccaggtag
atctctccacaacagagaagtagaacagatagttatgaatggatggggga
gggttgc
gaattctcccatctgtcacccccaccacaacttcagatagccaactgtcc
cctagctctgaggacctgatgacccacagtctttacattcaaatttgcag
tggcccatgcatattcattccatcatccctctttgctttggaccgccatg
tgaatttggaaaagaagacaaagctcttcttctgttagagacaaggctgg
gtctctgtagtgggcacacaaactctggtcttggagcccaacagctccct
ccgctttgcctcaaggaggagcagccattctggtggccgactctctttgc
ataactgtgtgcatttcccagtctcttcgtaaactctggcagggcctgga
gcccatctcagatcctctcttctccatgaagcctgatgccattcccagca
ctgataggctcaagcaggtccctgagtagccagccggaccatgaacacca
gatagcatttgcgttccttggacaactcaggttcttgtctgttgcattag
aaaaaagccagtctctagggttgtccctgcagaaaggtcctggactgcac
cttgggagagactgaggagtctcccatgttcagaacatgttatagaagcc
attgtatatatgtgggcaaagctatcttccatctcttgctcttttcataa
aggacctttgacctgaatgcacagggacaggaaatacctccctgagccct
ggcaatggttctccagagaggcattggttagagtttgtcagttggtatgc
tgctgtcttcaaggcctactatgccttggctgcggctcacgagctgagct
tttccgtccttccttgacctcatcacagaggtggcggatctagtcccact
tgcccacgatctgtctttattttcatagtggtcacttgtttgctgtctgc
tgggatggtagaaacagtctgggctcataagcactctctcttcagaagga
tggtcctttgtttcctaggcccccacggaaagactttcaaattttgtacc
agttcagttattgctacgactaacactggtcacaccccactaccgaggaa
cacttactgaagtgctatgtggtgccagcccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_72261406_72262484
seq2: B6Ng01-153P21.g_67_1149 (reverse)

seq1  TGGGGCTGGCACACAATAGGCAC-TCAGTAAGTGGTCCTCGTTAGT-GGG  48
      ||||||||||||   ||| |||| |||||||||| |||||| |||| |||
seq2  TGGGGCTGGCACCACATA-GCACTTCAGTAAGTGTTCCTCGGTAGTGGGG  49

seq1  TGTGAACAGTGTTAGTCGTTAGCAGTAACTGACTTGGTACAAAATTTGAA  98
      ||||| |||||||||||| ||||| |||||||  ||||||||||||||||
seq2  TGTGACCAGTGTTAGTCG-TAGCAATAACTGAACTGGTACAAAATTTGAA  98

seq1  AGTCTTTCCGT-GGGGCCTA-GAAAC-AAGGACCATCC-TCTGAAGAGAG  144
      ||||||||||| |||||||| ||||| ||||||||||| |||||||||||
seq2  AGTCTTTCCGTGGGGGCCTAGGAAACAAAGGACCATCCTTCTGAAGAGAG  148

seq1  AGTGCTTATGAGCCCAGACTGTTTCTACCATCCCAGCAGACAGCAAACAA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCTTATGAGCCCAGACTGTTTCTACCATCCCAGCAGACAGCAAACAA  198

seq1  GTGACCACTATGAAAATAAAGACAGATCGTGGGCAAGTGGGACTAGATCC  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCACTATGAAAATAAAGACAGATCGTGGGCAAGTGGGACTAGATCC  248

seq1  GCCACCTCTGTGATGAGGTCAAGGAAGGACGGAAAAGCTCAGCTCGTGAG  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTCTGTGATGAGGTCAAGGAAGGACGGAAAAGCTCAGCTCGTGAG  298

seq1  CCGCAGCCAAGGCATAGTAGGCCTTGAAGACAGCAGCATACCAACTGACA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAGCCAAGGCATAGTAGGCCTTGAAGACAGCAGCATACCAACTGACA  348

seq1  AACTCTAACCAATGCCTCTCTGGAGAACCATTGCCAGGGCTCAGGGAGGT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTAACCAATGCCTCTCTGGAGAACCATTGCCAGGGCTCAGGGAGGT  398

seq1  ATTTCCTGTCCCTGTGCATTCAGGTCAAAGGTCCTTTATGAAAAGAGCAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTGTCCCTGTGCATTCAGGTCAAAGGTCCTTTATGAAAAGAGCAA  448

seq1  GAGATGGAAGATAGCTTTGCCCACATATATACAATGGCTTCTATAACATG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGAAGATAGCTTTGCCCACATATATACAATGGCTTCTATAACATG  498

seq1  TTCTGAACATGGGAGACTCCTCAGTCTCTCCCAAGGTGCAGTCCAGGACC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAACATGGGAGACTCCTCAGTCTCTCCCAAGGTGCAGTCCAGGACC  548

seq1  TTTCTGCAGGGACAACCCTAGAGACTGGCTTTTTTCTAATGCAACAGACA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGCAGGGACAACCCTAGAGACTGGCTTTTTTCTAATGCAACAGACA  598

seq1  AGAACCTGAGTTGTCCAAGGAACGCAAATGCTATCTGGTGTTCATGGTCC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCTGAGTTGTCCAAGGAACGCAAATGCTATCTGGTGTTCATGGTCC  648

seq1  GGCTGGCTACTCAGGGACCTGCTTGAGCCTATCAGTGCTGGGAATGGCAT  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCTACTCAGGGACCTGCTTGAGCCTATCAGTGCTGGGAATGGCAT  698

seq1  CAGGCTTCATGGAGAAGAGAGGATCTGAGATGGGCTCCAGGCCCTGCCAG  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCTTCATGGAGAAGAGAGGATCTGAGATGGGCTCCAGGCCCTGCCAG  748

seq1  AGTTTACGAAGAGACTGGGAAATGCACACAGTTATGCAAAGAGAGTCGGC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTACGAAGAGACTGGGAAATGCACACAGTTATGCAAAGAGAGTCGGC  798

seq1  CACCAGAATGGCTGCTCCTCCTTGAGGCAAAGCGGAGGGAGCTGTTGGGC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGAATGGCTGCTCCTCCTTGAGGCAAAGCGGAGGGAGCTGTTGGGC  848

seq1  TCCAAGACCAGAGTTTGTGTGCCCACTACAGAGACCCAGCCTTGTCTCTA  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAGACCAGAGTTTGTGTGCCCACTACAGAGACCCAGCCTTGTCTCTA  898

seq1  ACAGAAGAAGAGCTTTGTCTTCTTTTCCAAATTCACATGGCGGTCCAAAG  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAGAAGAGCTTTGTCTTCTTTTCCAAATTCACATGGCGGTCCAAAG  948

seq1  CAAAGAGGGATGATGGAATGAATATGCATGGGCCACTGCAAATTTGAATG  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAGGGATGATGGAATGAATATGCATGGGCCACTGCAAATTTGAATG  998

seq1  TAAAGACTGTGGGTCATCAGGTCCTCAGAGCTAGGGGACAGTTGGCTATC  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGACTGTGGGTCATCAGGTCCTCAGAGCTAGGGGACAGTTGGCTATC  1048

seq1  TGAAGTTGTGGTGGGGGTGACAGATGGGAGAATTC  1079
      |||||||||||||||||||||||||||||||||||
seq2  TGAAGTTGTGGTGGGGGTGACAGATGGGAGAATTC  1083