BAC Information

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BAC

Clone NameB6Ng01-156E22
Chromosome17 (Build37)
Map Location 46,985,514 - 47,129,377
singlet/doubletdoublet
Overlap geneBC032203, A330017A19Rik, Tbcc, Prph2, Ubr2
Upstream geneVegfa, Mrps18a, 1700027N10Rik, Mad2l1bp, Gtpbp2, Polh, Xpo5, Rpo1-1, Yipf3, Gm88, Tjap1, Egfl9, Abcc10, BC040756, Zfp318, LOC677168, Crip3, Slc22a7, EG328825, Ttbk1, BC048355, Parc, Srf, Ptk7, Klc4, Mrpl2, Cul7, BC011248, Klhdc3, Mea1, Ppp2r5d, Pex6, Gnmt, Tnrc5, Ptcra, 2310039H08Rik, Rpl7l1
Downstream geneLOC100043385, EG240110, Trerf1, Mrps10, Guca1b, Guca1a, EG545208, 1700001C19Rik, AI661453, Tbn, Ccnd3, Bysl, Trfp, LOC668463, Usp49, 1110002E23Rik, Frs3, Pgc, LOC100043405, Tcfeb, Mdfi, Foxp4, LOC383250
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-156E22.bB6Ng01-156E22.g
ACCDH950847DH950848
length920353
definitionDH950847|Mus musculus domesticus DNA, BAC clone: B6Ng01-156E22, 5' end.DH950848|Mus musculus domesticus DNA, BAC clone: B6Ng01-156E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(47,128,457 - 47,129,377)(46,985,514 - 46,985,866)
sequence
gaattccaggacagccaaggctatacagagaaatcctgtctcgaaaaaaa
aggtgggacgagcctatgctgcttggaactcgaagagttaagaaagataa
cccagaaatcaggcttccacatcagcgtcaaccagtttgatctgatattt
taaatgataaatagaggcctgtggtgatggatcattcagggccacctcca
gcacctaagactctggatagttttattatgggcagatgaccctgccctgc
ccttcttcctctactaggaatgggagctggtgcatctggactcagacagt
aagggacagttgttaaaaggaacccctgctctcaggggaagataaaatgg
tgggaggagccctagtcctgttcttaattagggagctactgggtcagggc
ctttccaccagtttatttttgttcactctagcccggtgtcaatgataata
ggaaaagaaaaggggccatatataaaatcagttgtcttattctcatagac
cagggaccagggagaggcactccaggtcccttcagaatctcgggctggtg
tttcgtacagagcatgtgtaacagccagagcagggctgcctacccgtgtg
tcttggcccacatctgcatctcctgagaataagtgggatgtgcagtctgg
cgttgatggtgctgtaatacagagcacacaaatgcttacttgggcagaat
agaatagaatttattctgaaatttggtacacttgattttacccatcccta
acgctttttttgattttgttggtgatgttgggtttggtggcactttttta
aaagcagaatttctgatgtgccaccgactagcctgtaggtctgtcttggc
agccttagtaactagttactccagcttaagaaagtgtgactaagttatga
agtcccaggtgctacaaagt
acatcctgctgagtctgcctccaagtgctggggttaaaaggcatgagcta
ctactatgcctgacaggaatggaaaacgctttgacgatgaatagaatatc
aaattcattgttgtggtcaggataaccttgagcctcaggcttgccctacc
acacctggttcctgccaagctggagactgactccagagagctgtgcacgc
taaagaagctcgctgcccactggaccgcatctcagtcccttcccgcgcac
acctttaatcatctctagacaacttacaatccagataccgtgtagttatg
gaaacagcagctatactgtgttagtaagagatgatgggtcttgggggggg
ggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_47128457_47129377
seq2: B6Ng01-156E22.b_40_959 (reverse)

seq1  ACTTTGTTAGCACCTGGAGACTTCATTACTTAGTCACACTTTCTTAAGCT  50
      |||||| |||||||||| |||||||| |||||||||||||||||||||||
seq2  ACTTTG-TAGCACCTGG-GACTTCATAACTTAGTCACACTTTCTTAAGCT  48

seq1  -GAGTAACTAGTTACTAAGGCTGGCAAGACAGACCTACAGGCTAGTCGGT  99
       |||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  GGAGTAACTAGTTACTAAGGCTGCCAAGACAGACCTACAGGCTAGTCGGT  98

seq1  GGCACATCAGAAATTCTGCTTTTAAAAAAGTGCCACCAAACCCAACATCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACATCAGAAATTCTGCTTTTAAAAAAGTGCCACCAAACCCAACATCA  148

seq1  CCAACAAAATCAAAAAAAGCGTTAGGGATGGGTAAAATCAAGTGTACCAA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACAAAATCAAAAAAAGCGTTAGGGATGGGTAAAATCAAGTGTACCAA  198

seq1  ATTTCAGAATAAATTCTATTCTATTCTGCCCAAGTAAGCATTTGTGTGCT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCAGAATAAATTCTATTCTATTCTGCCCAAGTAAGCATTTGTGTGCT  248

seq1  CTGTATTACAGCACCATCAACGCCAGACTGCACATCCCACTTATTCTCAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTACAGCACCATCAACGCCAGACTGCACATCCCACTTATTCTCAG  298

seq1  GAGATGCAGATGTGGGCCAAGACACACGGGTAGGCAGCCCTGCTCTGGCT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGCAGATGTGGGCCAAGACACACGGGTAGGCAGCCCTGCTCTGGCT  348

seq1  GTTACACATGCTCTGTACGAAACACCAGCCCGAGATTCTGAAGGGACCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACACATGCTCTGTACGAAACACCAGCCCGAGATTCTGAAGGGACCTG  398

seq1  GAGTGCCTCTCCCTGGTCCCTGGTCTATGAGAATAAGACAACTGATTTTA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCCTCTCCCTGGTCCCTGGTCTATGAGAATAAGACAACTGATTTTA  448

seq1  TATATGGCCCCTTTTCTTTTCCTATTATCATTGACACCGGGCTAGAGTGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATGGCCCCTTTTCTTTTCCTATTATCATTGACACCGGGCTAGAGTGA  498

seq1  ACAAAAATAAACTGGTGGAAAGGCCCTGACCCAGTAGCTCCCTAATTAAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAATAAACTGGTGGAAAGGCCCTGACCCAGTAGCTCCCTAATTAAG  548

seq1  AACAGGACTAGGGCTCCTCCCACCATTTTATCTTCCCCTGAGAGCAGGGG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGACTAGGGCTCCTCCCACCATTTTATCTTCCCCTGAGAGCAGGGG  598

seq1  TTCCTTTTAACAACTGTCCCTTACTGTCTGAGTCCAGATGCACCAGCTCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTTAACAACTGTCCCTTACTGTCTGAGTCCAGATGCACCAGCTCC  648

seq1  CATTCCTAGTAGAGGAAGAAGGGCAGGGCAGGGTCATCTGCCCATAATAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTAGTAGAGGAAGAAGGGCAGGGCAGGGTCATCTGCCCATAATAA  698

seq1  AACTATCCAGAGTCTTAGGTGCTGGAGGTGGCCCTGAATGATCCATCACC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATCCAGAGTCTTAGGTGCTGGAGGTGGCCCTGAATGATCCATCACC  748

seq1  ACAGGCCTCTATTTATCATTTAAAATATCAGATCAAACTGGTTGACGCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCCTCTATTTATCATTTAAAATATCAGATCAAACTGGTTGACGCTG  798

seq1  ATGTGGAAGCCTGATTTCTGGGTTATCTTTCTTAACTCTTCGAGTTCCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGGAAGCCTGATTTCTGGGTTATCTTTCTTAACTCTTCGAGTTCCAA  848

seq1  GCAGCATAGGCTCGTCCCACCTTTTTTTTCGAGACAGGATTTCTCTGTAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCATAGGCTCGTCCCACCTTTTTTTTCGAGACAGGATTTCTCTGTAT  898

seq1  AGCCTTGGCTGTCCTGGAATTC  921
      ||||||||||||||||||||||
seq2  AGCCTTGGCTGTCCTGGAATTC  920

seq1: chr17_46985514_46985866
seq2: B6Ng01-156E22.g_72_424

seq1  ACATCCTGCTGAGTCTGCCTCCAAGTGCTGGGGTTAAAAGGCATGAGCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCTGCTGAGTCTGCCTCCAAGTGCTGGGGTTAAAAGGCATGAGCTA  50

seq1  CTACTATGCCTGACAGGAATGGAAAACGCTTTGACGATGAATAGAATATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTATGCCTGACAGGAATGGAAAACGCTTTGACGATGAATAGAATATC  100

seq1  AAATTCATTGTTGTGGTCAGGATAACCTTGAGCCTCAGGCTTGCCCTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCATTGTTGTGGTCAGGATAACCTTGAGCCTCAGGCTTGCCCTACC  150

seq1  ACACCTGGTTCCTGCCAAGCTGGAGACTGACTCCAGAGAGCTGTGCACGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTGGTTCCTGCCAAGCTGGAGACTGACTCCAGAGAGCTGTGCACGC  200

seq1  TAAAGAAGCTCGCTGCCCACTGGACCGCATCTCAGTCCCTTCCCGCGCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAAGCTCGCTGCCCACTGGACCGCATCTCAGTCCCTTCCCGCGCAC  250

seq1  ACCTTTAATCATCTCTAGACAACTTACAATCCAGATACCGTGTAGTTATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTAATCATCTCTAGACAACTTACAATCCAGATACCGTGTAGTTATG  300

seq1  GAAACAGCAGCTATACTGTGTTAGTAAGAGATGATGGGTCTTGGGGGGGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAGCAGCTATACTGTGTTAGTAAGAGATGATGGGTCTTGGGGGGGG  350

seq1  GGG  353
      |||
seq2  GGG  353