BAC Information

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BAC

Clone NameB6Ng01-160K17
Chromosome17 (Build37)
Map Location 93,622,845 - 93,623,777
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC627395, LOC676141, LOC668877, LOC100043746, LOC100043747, LOC100043748, LOC100043907, Adcyap1
Downstream geneLOC676157, LOC627503
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-160K17.bB6Ng01-160K17.g
ACCDH953983DH953984
length9191,101
definitionDH953983|Mus musculus domesticus DNA, BAC clone: B6Ng01-160K17, 5' end.DH953984|Mus musculus domesticus DNA, BAC clone: B6Ng01-160K17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccatgaatcattccagtgatatttcactccactttgagttgtatt
ttgtgtcaactgggaacaagtgactagaaaaatctgaggattctaattca
ggagtgattgttgcccacaggtgcatcttgtcctcaaatgtatcactgtg
ttttacacttctcagatcagacagtctcccatctttcacatagaagataa
aatcctcttctatctttcacatagaggataaaattctcagagaattcaaa
aattgtgtcgagcctttcttttttttttctttttaaagatttgtttattt
tatttttatgagtacactgtatctgtcttcagacacaccagaaaagtgga
ttggatacagatggttgtgagccaccatgtggttgctgggaattgaactc
agggcctctggaagagtagttagtgcacttaactgctgaaccatctctct
agcccctgtatcaagcctttctaagattggaacatttctcatccaagtag
ttctttcaaagcatgcatttaatttaagttttctaaccaaatataattaa
gattatttttccccagaagcaaaatctaagaatttccagaaaagcagtct
atatatgggaaacatctcctcatgtcccttcacagggtattgggaagtgt
gtcttggaaaaggaagaaccaagcaaagatatagtgtgaggcccagctca
gtagaggtgaatacctgcagttagctgttgccaagaagctgcagttgttt
tcttttcgtttttggttttggtttttttttgttgtttgtttgtttgtttg
tttgtacttatcagccatgggttaatacttctccccactcacaggagatg
gcccattcaggcgcaagtgagttcagatgctacagagcatgcgtcaaact
atatgcatttatgactgaa
gaattccaaataaaaccatagacagtgaaacttatagaggagaaagtggg
gaaaagtctcaaagatatgggcacaggtgaaagattcctgaatagaacat
caatggcttgtgttgtaagactgagaatcaacaaatgggtaagtttctgt
aaggcaaaagacactgccaataagacaaaaaggccaccaacagattggga
aaggatctttacctatcctaaatcagagaggggactaatatccaatatat
ataaagaactcaagaaggtgaactccagaaaatcaaataaccccattaaa
aatggggctcagagctaaacaaagaattctcatctgaggaataccgaatg
gttgagaagcacctgaaaaaatgttcaatctccttaatcatcagggaaat
gcaaatcaaaacaaccctgagattccacctcacaccagtcagaatggcta
aggtcaaaaattcaggtgacaacagatgctgtcgaggatgtggagaaaga
ggaacactcctccattgttggtgggattgcaagcttgtacaaccactctg
gaaatcaatatggcagttcctcagaaaattggatatagtcctactggaga
atcctgcaatacctctcctgggcatatttccagaagatgtttcaaccagt
aaaaaggacacatgctccactatgttcatagcagccttatttataatagc
cagaagctgggaagaacccacatgcctctcaacagaggaatggatacaga
aatgtgatacatttttcgcaatgcagaactactcagctgttaaaagatga
tttatgaaattcctagcaatggatggacctggagggatctcctgactgag
taccaatctcaaagaactctcatgatttgtcctcctgatagtggatatta
gccagaaacttagattgcctagatataagtacatttgcaaagaacttgaa
gctcacgagagggagaccaaaattggaatcttgcccttcttagattgggg
aacaaaacaccatggatgtagtaagagcaaaggttggaagctgaatgatg
tattgacattcgagaccgtgcccacatggtgggttactcgatactcagct
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_93622845_93623777
seq2: B6Ng01-160K17.b_41_959

seq1  GAATTCCATGAATCATTCCAGTGATATTTCACTCCACTTTGAGTTGTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGAATCATTCCAGTGATATTTCACTCCACTTTGAGTTGTATT  50

seq1  TTGTGTCAACTGGGAACAAGTGACTAGAAAAATCTGAGGATTCTAATTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTCAACTGGGAACAAGTGACTAGAAAAATCTGAGGATTCTAATTCA  100

seq1  GGAGTGATTGTTGCCCACAGGTGCATCTTGTCCTCAAATGTATCACTGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGATTGTTGCCCACAGGTGCATCTTGTCCTCAAATGTATCACTGTG  150

seq1  TTTTACACTTCTCAGATCAGACAGTCTCCCATCTTTCACATAGAAGATAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACACTTCTCAGATCAGACAGTCTCCCATCTTTCACATAGAAGATAA  200

seq1  AATCCTCTTCTATCTTTCACATAGAGGATAAAATTCTCAGAGAATTCAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTCTTCTATCTTTCACATAGAGGATAAAATTCTCAGAGAATTCAAA  250

seq1  AATTGTGTCGAGCCTTTCTTTTTTTTTTCTTTTTAAAGATTTGTTTATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGTGTCGAGCCTTTCTTTTTTTTTTCTTTTTAAAGATTTGTTTATTT  300

seq1  TATTTTTATGAGTACACTGTATCTGTCTTCAGACACACCAGAAAAGTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTTATGAGTACACTGTATCTGTCTTCAGACACACCAGAAAAGTGGA  350

seq1  TTGGATACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATACAGATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGAACTC  400

seq1  AGGGCCTCTGGAAGAGTAGTTAGTGCACTTAACTGCTGAACCATCTCTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCTCTGGAAGAGTAGTTAGTGCACTTAACTGCTGAACCATCTCTCT  450

seq1  AGCCCCTGTATCAAGCCTTTCTAAGATTGGAACATTTCTCATCCAAGTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCCTGTATCAAGCCTTTCTAAGATTGGAACATTTCTCATCCAAGTAG  500

seq1  TTCTTTCAAAGCATGCATTTAATTTAAGTTTTCTAACCAAATATAATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTCAAAGCATGCATTTAATTTAAGTTTTCTAACCAAATATAATTAA  550

seq1  GATTATTTTTCCCCAGAAGCAAAATCTAAGAATTTCCAGAAAAGCAGTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATTTTTCCCCAGAAGCAAAATCTAAGAATTTCCAGAAAAGCAGTCT  600

seq1  ATATATGGGAAACATCTCCTCATGTCCCTTCACAGGGTATTGGGAAGTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATGGGAAACATCTCCTCATGTCCCTTCACAGGGTATTGGGAAGTGT  650

seq1  GTCTTGGAAAAGGAAGAACCAAGCAAAGATATAGTGTGAGGCCCAGCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTGGAAAAGGAAGAACCAAGCAAAGATATAGTGTGAGGCCCAGCTCA  700

seq1  GTAGAGGTGAATACCTGCAGTTAGCTGTTGCCAAGAAGCTGCAGTTGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGGTGAATACCTGCAGTTAGCTGTTGCCAAGAAGCTGCAGTTGTTT  750

seq1  TCTTTTCGTTTTTGGTTTTGGTTTTTTTTTGTTTGTTTGTTTTGTTTTGT  800
      ||||||||||||||||||||||||||||||| ||||||||||   |||||
seq2  TCTTTTCGTTTTTGGTTTTGGTTTTTTTTTG-TTGTTTGTTT--GTTTGT  797

seq1  TTTGTTTTGTACTTATCAGCCATGGGTTAATACTTCTCCCCCACTCACCA  850
      ||   |||||||||||||||||||||||||||||||| ||||||||| ||
seq2  TT--GTTTGTACTTATCAGCCATGGGTTAATACTTCT-CCCCACTCA-CA  843

seq1  GGAGATGGCCCATTCAGGCGGCAAAGTGAGTTCAGAATGCTACAGAGCAT  900
      ||||||||||||||||||||   |||||||||||| ||||||||||||||
seq2  GGAGATGGCCCATTCAGGCG--CAAGTGAGTTCAG-ATGCTACAGAGCAT  890

seq1  GCCACCAAAAACTATATGCAATTTAAGACTGAA  933
      ||  |   ||||||||||| ||||| |||||||
seq2  GCGTC---AAACTATATGC-ATTTATGACTGAA  919