BAC Information

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BAC

Clone NameB6Ng01-167L18
Chromosome17 (Build37)
Map Location 30,147,676 - 30,148,650
singlet/doubletsinglet
Overlap geneZfand3
Upstream geneSfrs3, LOC100042815, Cdkn1a, 9830134C10Rik, LOC100043341, Cpne5, Ppil1, BC004004, LOC100043348, Pi16, Mtch1, Fgd2, Pim1, 4933413N12Rik, Tbc1d22b, Rnf8, 1300018I05Rik, Mdga1, LOC100042885, LOC100042888
Downstream geneBtbd9, EG623169, Glo1, LOC666942, 1700097N02Rik, Dnahc8, Glp1r, Umodl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167L18.bB6Ng01-167L18.g
ACCDH959151DH959152
length758969
definitionDH959151|Mus musculus domesticus DNA, BAC clone: B6Ng01-167L18, 5' end.DH959152|Mus musculus domesticus DNA, BAC clone: B6Ng01-167L18, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgggcctcacgcttgagcagtcaacacttcaccctctgagccag
ctctccggctcctttatctggatgtcttgtgcactgggtaaagccaacca
tcccagccagattttccctaacactgatgctaggcacagctaaataaatc
aacactgggacacagaacgatttagttaaaagacatcgatgtgggtgggt
gggtgggggagctattacgttgtcccaagaactcttatggccttgaaaag
cctggtattcaactggcatggtgctcataaaaagtgaatgtgaggcacct
cccgatctctacgaattcacagtgtaggagaaagtcatcaatagtgttgt
gttttataaaacagtgtatgatggagtgggaggggatgccttaatttgct
catgctcccgcctgcggggccctgatcctgacaagcccaattttcttcca
atggggaactggatgggtgactggggaattgtcggccataaagaaacgga
cttgctgagaatgacagacaactgagggagaaagaccccgggaacaagac
agctgaggattctttagatgatatatagggagacagggagacttatatat
cctgtcatacacagaccccacaactccctggtcttggcaacgcctttcgg
gctctactggacgggttcctctctcccccgcttgtcccctgccggttttt
tttaacggattagatagttccccttgccgcctgcctgccatactattttg
gtttatta
gaattcaacagagatagaaacaaaaacaacaacaacaaaaaaaaaaaaac
taaaaatctggaaattaaataaataaaaaagttctgggctgccaggcgtg
gtggtgcacacctttaatcccagcacttgggaagcaggaggcaggaggat
ttctgagtttgagcccagcctggtctatagagtgagttccaggacagcca
gggctacacagagaaaccctgtctaaaaaaaaaaaaagaatcataacaga
atatttcccctagtttagaaagatatgagacattagggcactaaacagac
aaagccagaaaagaagcacccctcaaactataattaaaacacgaaatcta
agacaaaggaaatatcaggagagaaacaccaagtgacaaataaggtggtg
ccattcataacagcggtcaactgaaacctgaaagcaacgacaacaaatac
caaccctgattgtatacccagcaacactatctgtaaaactgaaagaaaaa
taaaaatgccccataattactaactcagttctaaaagaaaaagaaaaaaa
aaaaaaaaaaacaaaaaaaaacaaaaaaaaacttgaagaaatctttcaga
aagagaaaaaaaatatacccatccaggaaagaaaaaaccacactagaatt
aacagatacagagggcagaaaaccaaacagtataaaaatcaacaaaatga
acaacagtagtcatagtcaatatacactttccagtaactctgaacattgc
caattgtgctggtacacacctttaatcgtaacagaggtctctctatgaac
tcaaggccaccatggtctacatctgctgttctcaaactttcctagtagtc
ctgtgaccctttgatacagttcctcatgtgtgtgactggcaaccataaat
tatttccattgctactttgtaactgtaactttactgttataatgtatata
atatctgtgttttctgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_30147676_30148650
seq2: B6Ng01-167L18.g_67_1035 (reverse)

seq1  AAACAGAAAACACAGATATTTATATTACAATTTATAACAGTAAAGTTACA  50
      |||||||||||||||||| ||||| ||||  |||||||||||||||||||
seq2  AAACAGAAAACACAGATA-TTATA-TACA--TTATAACAGTAAAGTTACA  46

seq1  GTTACAAAGTAGCAATGGAAATAATTTTATGGTTGCCAGTCACCACAACA  100
      |||||||||||||||||||||||| ||||||||||||||||| ||| |||
seq2  GTTACAAAGTAGCAATGGAAATAA-TTTATGGTTGCCAGTCA-CAC-ACA  93

seq1  TGAGGAACTGTATCAAAGGGTCACAGGACTACTAGG-AAGTTTGAGAACA  149
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGAGGAACTGTATCAAAGGGTCACAGGACTACTAGGAAAGTTTGAGAACA  143

seq1  GCAGATGTAGACCATGGTGGCCTTGAGTTCATAGAGAGACCTCTGTTACG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGTAGACCATGGTGGCCTTGAGTTCATAGAGAGACCTCTGTTACG  193

seq1  ATTAAAGGTGTGTACCAGCACAATTGGCAATGTTCAGAGTTACTGGAAAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGTGTGTACCAGCACAATTGGCAATGTTCAGAGTTACTGGAAAG  243

seq1  TGTATATTGACTATGACTACTGTTGTTCATTTTGTTGATTTTTATACTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATATTGACTATGACTACTGTTGTTCATTTTGTTGATTTTTATACTGT  293

seq1  TTGGTTTTCTGCCCTCTGTATCTGTTAATTCTAGTGTGGTTTTTTCTTTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTTTCTGCCCTCTGTATCTGTTAATTCTAGTGTGGTTTTTTCTTTC  343

seq1  CTGGATGGGTATATTTTTTTTCTCTTTCTGAAAGATTTCTTCAAGTTTTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGGGTATATTTTTTTTCTCTTTCTGAAAGATTTCTTCAAGTTTTT  393

seq1  TTTTGTTTTTTTTTGTTTTTTTTTTTTTTTTTTCTTTTTCTTTTAGAACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTTTTTGTTTTTTTTTTTTTTTTTTCTTTTTCTTTTAGAACT  443

seq1  GAGTTAGTAATTATGGGGCATTTTTATTTTTCTTTCAGTTTTACAGATAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTAGTAATTATGGGGCATTTTTATTTTTCTTTCAGTTTTACAGATAG  493

seq1  TGTTGCTGGGTATACAATCAGGGTTGGTATTTGTTGTCGTTGCTTTCAGG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTGGGTATACAATCAGGGTTGGTATTTGTTGTCGTTGCTTTCAGG  543

seq1  TTTCAGTTGACCGCTGTTATGAATGGCACCACCTTATTTGTCACTTGGTG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGTTGACCGCTGTTATGAATGGCACCACCTTATTTGTCACTTGGTG  593

seq1  TTTCTCTCCTGATATTTCCTTTGTCTTAGATTTCGTGTTTTAATTATAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCCTGATATTTCCTTTGTCTTAGATTTCGTGTTTTAATTATAGT  643

seq1  CTGAGGGGTGCTTCTTTTCTGGCTTTGTCTGTTTAGTGCCCTAATGTCTC  699
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGGTGCTTCTTTTCTGGCTTTGTCTGTTTAGTGCCCTAATGTCTC  693

seq1  ATATCTTTCTAAACTAGGGGAAATATTCTGTTATGATTCTTTTTTTTTTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTTCTAAACTAGGGGAAATATTCTGTTATGATTCTTTTTTTTTTT  743

seq1  TTAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGACAGGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTCTAT  793

seq1  AGACCAGGCTGGGCTCAAACTCAGAAATCCTCCTGCCTCCTGCTTCCCAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGGCTGGGCTCAAACTCAGAAATCCTCCTGCCTCCTGCTTCCCAA  843

seq1  GTGCTGGGATTAAAGGTGTGCACCACCACGCCTGGCAGCCCAGAACTTTT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGGGATTAAAGGTGTGCACCACCACGCCTGGCAGCCCAGAACTTTT  893

seq1  TTATTTATTTAATTTCCAGATTTTTAGTTTTTTTTTTTTTGTTGTTGTTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTATTTAATTTCCAGATTTTTAGTTTTTTTTTTTTTGTTGTTGTTG  943

seq1  TTTTTGTTTCTATCTCTGTTGAATTC  975
      ||||||||||||||||||||||||||
seq2  TTTTTGTTTCTATCTCTGTTGAATTC  969