BAC Information

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BAC

Clone NameB6Ng01-169J02
Chromosome17 (Build37)
Map Location 38,732,429 - 38,733,518
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132, Olfr133, Olfr134, Olfr135, Olfr138, Olfr137, Olfr762-ps1, Olfr136, LOC626985
Downstream geneLOC100043297, LOC100043300
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-169J02.bB6Ng01-169J02.g
ACCDH960513DH960514
length1,119652
definitionDH960513|Mus musculus domesticus DNA, BAC clone: B6Ng01-169J02, 5' end.DH960514|Mus musculus domesticus DNA, BAC clone: B6Ng01-169J02, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaaatggaatcatcatagttcccttactgttactttaatctgat
cacattggaatgaaaatgaacttgtcttcaaactctgaacatttatgatc
atgcagtactatcatgggtttgtttacatcttttatgtgattcactggag
atttcattcaagtacatgagagattttgatcacactcatgtttcaagctc
tcttatttacatctatcttccttgaacaataacaatttttcttaagaaat
actttctggactttgactttggttgctgttgtaatttgtgacaggatatg
tttaaccagggctacacacatggtcatttgtgtgaagtgatcccaggaac
aagccaactcaccagtgactaagccactgagataattaatcccactgctt
cagaagctctcactaccaatgtcttcatagaggacaagcaatatctatga
gaaccattcccatataaaactgaatgtttacaattctagtcttaaaaagt
caatataatggcaaacagatccatttttccatgtggaaaagtataacaag
taacagatgtatattcatattcatttaagtcacttgaattctctaaactt
gaataaattgttgaaagagtacttgtttttgaggtcagggatggtgactc
ttccagaatttctctactgttttagttttttttttttttttttttttttt
agctattctgcatttttttggacttccacattgttaagaaatataattac
aaggtctgtaaagaattgtgttggagttttgatggggattccattgactc
tgtgtattgctataggtaaaatggtcattttcactattattaatcctcac
tacccatgagcatggaaattttttttctaatttttctgaaatatttactc
aattttcttttccttcagaagtcttgaagtcccttgtcataactgggttt
ttcttctttgttttttagaagtcacagtaagaatatatatattattttat
ataataatgttagctacttaggaaaagttattgagtctcaaaatcttttc
tcatccattttaacaatttgtaataaatggaagttctaacttaaactttt
attgagtttttctttgaaa
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatctgggaaatgcaaatcaaaacaacactgagat
tccacttcactccagtcagaatggctaagatcaaaatctcaggtgacagc
agatggtggcgaggatgtggagaaaggggaacactcctccatttttggtg
ggattgcaagcttgtacaaccactctggaaataagtctggcagttcttca
gaaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaaaacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaaaccagat
gcccctcaaaagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctatttaaaaaaaatgaatttatgaaatttctaggca
aatgaattgacctggagggtatcatcctgagtgaagtaacccaatcacaa
aggaactcgtacaatatgtactcactgataagtggatattagctcagata
cttaggatacccaagaaataagatataacttgccaaacgtatgaaatttt
ag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_38732429_38733518
seq2: B6Ng01-169J02.b_48_1165

seq1  GAATTCAAAATGGAATCATCATAGTTCCCTTACTGTTACTTTAATCTGAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAAATGGAATCATCATAGTTCCCTTACTGTTACTTTAATCTGAT  50

seq1  CACATTGGAATGAAAATGAACTTGTCTTCAAACTCTGAACATTTATGATC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTGGAATGAAAATGAACTTGTCTTCAAACTCTGAACATTTATGATC  100

seq1  ATGCAGTACTATCATGGGTTTGTTTACATCTTTTATGTGATTCACTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGTACTATCATGGGTTTGTTTACATCTTTTATGTGATTCACTGGAG  150

seq1  ATTTCATTCAAGTACATGAGAGATTTTGATCACACTCATGTTTCAAGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTCAAGTACATGAGAGATTTTGATCACACTCATGTTTCAAGCTC  200

seq1  TCTTATTTACATCTATCTTCCTTGAACAATAACAATTTTTCTTAAGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTATTTACATCTATCTTCCTTGAACAATAACAATTTTTCTTAAGAAAT  250

seq1  ACTTTCTGGACTTTGACTTTGGTTGCTGTTGTAATTTGTGACAGGATATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTGGACTTTGACTTTGGTTGCTGTTGTAATTTGTGACAGGATATG  300

seq1  TTTAACCAGGGCTACACACATGGTCATTTGTGTGAAGTGATCCCAGGAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACCAGGGCTACACACATGGTCATTTGTGTGAAGTGATCCCAGGAAC  350

seq1  AAGCCAACTCACCAGTGACTAAGCCACTGAGATAATTAATCCCACTGCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCAACTCACCAGTGACTAAGCCACTGAGATAATTAATCCCACTGCTT  400

seq1  CAGAAGCTCTCACTACCAATGTCTTCATAGAGGACAAGCAATATCTATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAGCTCTCACTACCAATGTCTTCATAGAGGACAAGCAATATCTATGA  450

seq1  GAACCATTCCCATATAAAACTGAATGTTTACAATTCTAGTCTTAAAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCATTCCCATATAAAACTGAATGTTTACAATTCTAGTCTTAAAAAGT  500

seq1  CAATATAATGGCAAACAGATCCATTTTTCCATGTGGAAAAGTATAACAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATAATGGCAAACAGATCCATTTTTCCATGTGGAAAAGTATAACAAG  550

seq1  TAACAGATGTATATTCATATTCATTTAAGTCACTTGAATTCTCTAAACTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGATGTATATTCATATTCATTTAAGTCACTTGAATTCTCTAAACTT  600

seq1  GAATAAATTGTTGAAAGAGTACTTGTTTTTGAGGTCAGGGATGGTGACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAAATTGTTGAAAGAGTACTTGTTTTTGAGGTCAGGGATGGTGACTC  650

seq1  TTCCAGAATTTCTCTACTGTTTTAGTTTTTTTTTTTTTTTTTTTTTTTTT  700
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TTCCAGAATTTCTCTACTGTTTTAG-TTTTTTTTTTTTTTTTTTTTTTTT  699

seq1  TAGCTATTCTGCATTTTTTTGGACTTCCACATTGTTAAGAAATATAATTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTATTCTGCATTTTTTTGGACTTCCACATTGTTAAGAAATATAATTA  749

seq1  CAAGGTCTGTAAAGAATTGTGTTGGAGTTTTGATGGGGATTCCATTGACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTCTGTAAAGAATTGTGTTGGAGTTTTGATGGGGATTCCATTGACT  799

seq1  CTGTGTATTGCTATAGGTAAGATGGTCATTTTCACTA-TATTAATCCTCA  849
      |||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  CTGTGTATTGCTATAGGTAAAATGGTCATTTTCACTATTATTAATCCTCA  849

seq1  CTACCCATGAGCATGGAAA-TTTTTTTCTA--TTTTCTGATATA-TTACT  895
      ||||||||||||||||||| ||||||||||  |||||||| ||| |||||
seq2  CTACCCATGAGCATGGAAATTTTTTTTCTAATTTTTCTGAAATATTTACT  899

seq1  CAA-TTTCTTT--CCTCAG-AGTCTTGAAGT-CCTTGTCAT-ACT-GGTT  938
      ||| |||||||  | |||| ||||||||||| ||||||||| ||| ||||
seq2  CAATTTTCTTTTCCTTCAGAAGTCTTGAAGTCCCTTGTCATAACTGGGTT  949

seq1  TTTCT--CTTCTTTTTTAG-AGTCACAGTAAGAATATATATAT--ATATA  983
      |||||   || |||||||| |||||||||||||||||||||||   | ||
seq2  TTTCTTCTTTGTTTTTTAGAAGTCACAGTAAGAATATATATATTATTTTA  999

seq1  TATAAT-ATG-TAGCTAC-TAGGAAAAG-TATTGAGTCTCCAAAATC-TT  1028
      |||||| ||| ||||||| ||||||||| |||||||||| ||||||| ||
seq2  TATAATAATGTTAGCTACTTAGGAAAAGTTATTGAGTCT-CAAAATCTTT  1048

seq1  TCTCATCCATTTT-ACCATTTGT-ATAA--TGAAG-TCTAACTTAA--CT  1071
      ||||||||||||| || |||||| ||||   |||| ||||||||||   |
seq2  TCTCATCCATTTTAACAATTTGTAATAAATGGAAGTTCTAACTTAAACTT  1098

seq1  TTATTGAG-TTTTCTTTGAA  1090
      |||||||| |||||||||||
seq2  TTATTGAGTTTTTCTTTGAA  1118