BAC Information

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BAC

Clone NameB6Ng01-174I01
Chromosome3 (Build37)17 (Build37)
Map Location 71,831,546 - 71,832,08394,568,219 - 94,568,739
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneEG667377, LOC667385
Downstream geneLOC100041459, 2010204N08Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174I01.bB6Ng01-174I01.g
ACCGA002565GA002566
length552515
definitionB6Ng01-174I01.b B6Ng01-174I01.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(71,831,546 - 71,832,083)(94,568,219 - 94,568,739)
sequence
ctgatctttccaagacttttatcatgaatgtgtgttggatcttgtcgaat
gctttttctgcttctaaccagatgatcatgtggtttttgtctttgagttt
gtttatataatggattaagttgatggatttccatatattaaaccatccct
gtatccctgggatgaaacctacttggtcaggatggatgattgctttaatg
tgttcttggattcggttagcgagaattttattgaggatttttgcatcgat
attcataagggaagttggtctgaagttctctatctttgttggatctttct
gtggtttaggtatcagagtaattgtggcttcatagaatgagttgggtaga
gttccttctacttctattttgtgaaataatttgtgcagaactggaattag
atcttctttgaaggtctggtagaactctgcactaaacccatctggtcctg
ggctttttttttgcctgggagactattaatgactgcttctatttctttag
gggtttatgggactgtttagatcattaacttgatcctgattttaactttg
gt
tatggataaagagtagacatactaagctacctggattgcttaacaaccat
tcctgtctaatattcctcatataagtctcattgcaaccatctaccctgta
gttttaactttgtagaccttggatcaacataccatcagacttcctgtaac
tcccattttggttttcttcttgcttcatcttcactgcagtagagcagtac
atgatgagtctttaggcatgttaatctttcctctgcttggaaagaggaaa
ccaaacaagcacacagagcccctaaagaaggagctagagaaagtatccaa
ggagctaaaggggtcggcaaccctataggaggatcaacaatatgaactaa
ccagtccagtaccccacagaactgtgtctctagttgcatatgtagcagag
gatggcctcgtaagccacagatgggaggagaggcccttggtcttgggaag
atcatatgtcccagtataggggaatgccagggccagaaagtgggagtggg
tggtttggggagcag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr3_71831546_71832083
seq2: B6Ng01-174I01.b_59_600 (reverse)

seq1  ACCAAAGTT-GAATCAGGATCAAGTTGACCATCTAAACAGTCCCAT-ATC  48
      |||||||||  ||||||||||||||| |  |||||||||||||||| | |
seq2  ACCAAAGTTAAAATCAGGATCAAGTTAATGATCTAAACAGTCCCATAAAC  50

seq1  ACCTAAAGAAATAGAAGCAGTTATTAATAGTCTCCCAACC--AAAAAAAG  96
       |||||||||||||||||||| |||||||||||||||  |  ||||||||
seq2  CCCTAAAGAAATAGAAGCAGTCATTAATAGTCTCCCAGGCAAAAAAAAAG  100

seq1  CCCAGGACCAGATGGGTTTAGTGCAGAGTTCTATCAGACCTTCAAAGAAG  146
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCCAGGACCAGATGGGTTTAGTGCAGAGTTCTACCAGACCTTCAAAGAAG  150

seq1  ATCTAATTCCAATTCTGCACAAACTATTTCACAAAATAGAAGTAGAAGGT  196
      ||||||||||| ||||||||||| ||||||||||||||||||||||||| 
seq2  ATCTAATTCCAGTTCTGCACAAATTATTTCACAAAATAGAAGTAGAAGGA  200

seq1  ACTCTACCCAACTCATTTTATGAAGCCACTATTACTCTGATACCTAAACC  246
      ||||||||||||||||| ||||||||||| ||||||||||||||||||||
seq2  ACTCTACCCAACTCATTCTATGAAGCCACAATTACTCTGATACCTAAACC  250

seq1  ACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAATTTCTCTTATGA  296
      |||||||||||||||||||||||||||||||||||||| ||| |||||||
seq2  ACAGAAAGATCCAACAAAGATAGAGAACTTCAGACCAACTTCCCTTATGA  300

seq1  ATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAAGAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCGATGCAAAAATCCTCAATAAAATTCTCGCTAACCGAATCCAAGAA  350

seq1  CACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTTATTCCAGGGAT  396
      |||||||||||||||||||||||||||||||||||||| || ||||||||
seq2  CACATTAAAGCAATCATCCATCCTGACCAAGTAGGTTTCATCCCAGGGAT  400

seq1  GCAGGGATGGTTTAATATACGAAAATCCATCAATGTAATCCATTATATAA  446
       |||||||||||||||||| | |||||||||||  |||||||||||||||
seq2  ACAGGGATGGTTTAATATATGGAAATCCATCAACTTAATCCATTATATAA  450

seq1  ACAAACTCAAAGACAAAAATCACATGATCATCTCGTTAGATGCAGAAAAA  496
      ||||||||||||||||||| ||||||||||||| |||||| |||||||||
seq2  ACAAACTCAAAGACAAAAACCACATGATCATCTGGTTAGAAGCAGAAAAA  500

seq1  GCATTTGACAAGATCCAACACCCATTCATGATAAAAGTTTTG  538
      ||||| ||||||||||||||| |||||||||||||||| |||
seq2  GCATTCGACAAGATCCAACACACATTCATGATAAAAGTCTTG  542

seq1: chr17_94568219_94568739
seq2: B6Ng01-174I01.g_64_584

seq1  GAATTCTATGGATAAAGAGTAGACATACTAAGCTACCTGGATTGCTTAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTATGGATAAAGAGTAGACATACTAAGCTACCTGGATTGCTTAAC  50

seq1  AACCATTCCTGTCTAATATTCCTCATATAAGTCTCATTGCAACCATCTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATTCCTGTCTAATATTCCTCATATAAGTCTCATTGCAACCATCTAC  100

seq1  CCTGTAGTTTTAACTTTGTAGACCTTGGATCAACATACCATCAGACTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTAGTTTTAACTTTGTAGACCTTGGATCAACATACCATCAGACTTCC  150

seq1  TGTAACTCCCATTTTGGTTTTCTTCTTGCTTCATCTTCACTGCAGTAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACTCCCATTTTGGTTTTCTTCTTGCTTCATCTTCACTGCAGTAGAG  200

seq1  CAGTACATGATGAGTCTTTAGGCATGTTAATCTTTCCTCTGCTTGGAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTACATGATGAGTCTTTAGGCATGTTAATCTTTCCTCTGCTTGGAAAG  250

seq1  AGGAAACCAAACAAGCACACAGAGCCCCTAAAGAAGGAGCTAGAGAAAGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAACCAAACAAGCACACAGAGCCCCTAAAGAAGGAGCTAGAGAAAGT  300

seq1  ATCCAAGGAGCTAAAGGGGTCGGCAACCCTATAGGAGGATCAACAATATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAAGGAGCTAAAGGGGTCGGCAACCCTATAGGAGGATCAACAATATG  350

seq1  AACTAACCAGTCCAGTACCCCACAGAACTGTGTCTCTAGTTGCATATGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAACCAGTCCAGTACCCCACAGAACTGTGTCTCTAGTTGCATATGTA  400

seq1  GCAGAGGATGGCCTCGTAAGCCACAGATGGGAGGAGAGGCCCTTGGTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGATGGCCTCGTAAGCCACAGATGGGAGGAGAGGCCCTTGGTCTT  450

seq1  GGGAAGATCATATGTCCCAGTATAGGGGAATGCCAGGGCCAGAAAGTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGATCATATGTCCCAGTATAGGGGAATGCCAGGGCCAGAAAGTGGG  500

seq1  AGTGGGTGGTTTGGGGAGCAG  521
      |||||||||||||||||||||
seq2  AGTGGGTGGTTTGGGGAGCAG  521