BAC Information

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BAC

Clone NameB6Ng01-174J22
Chromosome17 (Build37)
Map Location 37,275,600 - 37,276,629
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC672718, ENSMUSG00000073403, LOC675325, LOC626268, EG667977, LOC625785, H2-T3, LOC100043127, EG667827, LOC435525, LOC677333, LOC100043134, LOC625881, Rpp21, Trim39, H2-M10.2, H2-M10.1, H2-M10.3, Gm318, LOC100043140, LOC674152, LOC383240, LOC224752, H2-M10.4, H2-M11, LOC667896, H2-M9, LOC620340, H2-M1, LOC667912, LOC100043158, LOC667915, H2-M10.5, H2-M10.6, Trim26, Trim15, Trim10, LOC100043164, Trim40, Trim31, Ppp1r11, Znrd1, 1700022C21Rik, H2-M6-ps, 2410137M14Rik, H2-M4-ps, D130003B22Rik, Zfp57, Mog, Gabbr1, Olfr90, Olfr91, Olfr92, EG224763, LOC667973
Downstream geneOlfr93, Olfr753-ps1, LOC630355, Ubd, Olfr94, Olfr95, Olfr96, Olfr97, Olfr754-ps1, Olfr98, H2-M3, Olfr755-ps1, Olfr99, Olfr756-ps1, Olfr101, Olfr102, Olfr103, Olfr104, GA_x5J8B7W5KGR-1115818-1115257, Olfr105, Olfr758-ps1, Olfr106, Olfr107, Olfr759-ps1, Olfr108, Olfr760-ps1, Olfr109, H2-M2, Olfr110, Olfr111, Olfr112, Olfr113, Olfr114, Olfr115, Olfr116, Olfr117, Olfr118, Olfr119, Scocp, Olfr120, Olfr1558-ps1, Olfr121, Olfr122, Olfr123, Olfr124, Olfr125, LOC672822, Olfr126, Olfr127, Olfr128, Ppia-ps17_697.1, Olfr761, Olfr1552-ps1, LOC100043265, Olfr129, Olfr130, Olfr131, Olfr132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-174J22.bB6Ng01-174J22.g
ACCGA002654GA002655
length1,073853
definitionB6Ng01-174J22.b B6Ng01-174J22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcactggatatcttgattacaagattgtctcttagaccaccaaaga
ctggtgtactgtgtgagaacagtagcagattcagaggcttatttcatccc
tgtaacatctaactcactacaggtaactcataagtttcataatggaactc
ataagttaaatcaatgaaatagtagtgattgtttcatgcatgttgaaaca
gccatgcatttattaatatgcctgatatctaggataaattttaagacaat
aaaatgatcttccaggtaagcagatagaaaattgaatcattagaaggaca
caagaaggtacgtactatggaatggttagggttttccaatagattttttt
aaacaagaaaaaaaaaatcccccccaatgcatatagctaaaagagtattt
cttatttagggttttactactgtgaacagacaacatgaccaaggcaactc
ttataaaggacaacatttaattggggctggcttacaggttcagaggttca
gtccagtatcatcactgcaggagcttagctatttacaggcaggaatgata
tgggaggagccgagggttctatatcttgttccaaaggcaaccatgagaac
actggttctcaggaggttaggaggaggacctcaaagcccatctccacagt
gacatatttcctccaacaaggccttctaatagtgccattccatagtccaa
acatgcaaaccaccactgggtatttttttgatttgctattgtacatcatt
ttattgtacaaaagttaaacgtttatagataaaattgacacaccagtcat
caggataagtcatttagaggaaataaaaaattacatatggattctccttc
tggtcctcaatactagaaaatacagaaacatttttttttttattaaaagt
agcccacctttccttaaattacttggaagaccacaataaaagggatccat
taccctatgttctttttgtaaagaattccatgtaaaccctataagagata
aataataatttaatttaggaagctcccatcaccttttgaaaccaataatg
tgccttttcttacatttttttct
gaattctttctttaaacttttgctgttaacatggtggattttagggactt
ctgaagcctctggtacacttcttatcaatacctggtcaatttcactatca
cttcatgccagagggcctgtcagacctgtataggatcttatgtgtgttat
atatcgtggatgactcctatttctgatcatttgttgccactgagtaaata
gtgaagtcaattcagaatcatcctgaataagttcagcagtctctatgtgt
aaaacacgttctgcatattgagagtcagttattatataaagagactcttg
aaaatctgacagcaccgtgtgtgttgcatataattcatattttttaacca
actgacagggactcttagcaactttacttatatcttcagatttacatcct
accttccctgacttattagcatcagtaataaataaataataaataaaatg
taggagctccagaaatttgaaatctttattatactagggagaatccagtt
agttctttttatcagctgaagtcacttgcttttagaacctctgttgctaa
tctctcccaagaaattattgcatgctctttgccaatgttcatcttgtgcc
cataacgaggcagtccctgtgttatttaaaaagtaccacaaatttcagct
ggatctattccagctaattgtcaaaagtctcatttttcctttttagtatc
aattcagagaccctatgtaggtttttaaattttcctactctgttttagga
gctaaaaaatatccaattctaagataaatcttcactctgcatgagaattt
tcagtaggggggaaggggtagaagggtaagataactaatttccgggccat
ctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_37275600_37276629
seq2: B6Ng01-174J22.b_47_1119

seq1  GAATTCACTGGATATCTTGATTACAAGATTGTCTCTTAGACCACCAAAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGGATATCTTGATTACAAGATTGTCTCTTAGACCACCAAAGA  50

seq1  CTGGTGTACTGTGTGAGAACAGTAGCAGATTCAGAGGCTTATTTCATCCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGTACTGTGTGAGAACAGTAGCAGATTCAGAGGCTTATTTCATCCC  100

seq1  TGTAACATCTAACTCACTACAGGTAACTCATAAGTTTCATAATGGAACTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAACATCTAACTCACTACAGGTAACTCATAAGTTTCATAATGGAACTC  150

seq1  ATAAGTTAAATCAATGAAATAGTAGTGATTGTTTCATGCATGTTGAAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTTAAATCAATGAAATAGTAGTGATTGTTTCATGCATGTTGAAACA  200

seq1  GCCATGCATTTATTAATATGCCTGATATCTAGGATAAATTTTAAGACAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGCATTTATTAATATGCCTGATATCTAGGATAAATTTTAAGACAAT  250

seq1  AAAATGATCTTCCAGGTAAGCAGATAGAAAATTGAATCATTAGAAGGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGATCTTCCAGGTAAGCAGATAGAAAATTGAATCATTAGAAGGACA  300

seq1  CAAGAAGGTACGTACTATGGAATGGTTAGGGTTTTCCAATAGATTTTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAAGGTACGTACTATGGAATGGTTAGGGTTTTCCAATAGATTTTTTT  350

seq1  AAACAAGAAAAAAAAAATCCCCCCCAATGCATATAGCTAAAAGAGTATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAGAAAAAAAAAATCCCCCCCAATGCATATAGCTAAAAGAGTATTT  400

seq1  CTTATTTAGGGTTTTACTACTGTGAACAGACAACATGACCAAGGCAACTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTAGGGTTTTACTACTGTGAACAGACAACATGACCAAGGCAACTC  450

seq1  TTATAAAGGACAACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAAAGGACAACATTTAATTGGGGCTGGCTTACAGGTTCAGAGGTTCA  500

seq1  GTCCAGTATCATCACTGCAGGAGCTTAGCTATTTACAGGCAGGAATGATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAGTATCATCACTGCAGGAGCTTAGCTATTTACAGGCAGGAATGATA  550

seq1  TGGGAGGAGCCGAGGGTTCTATATCTTGTTCCAAAGGCAACCATGAGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGAGCCGAGGGTTCTATATCTTGTTCCAAAGGCAACCATGAGAAC  600

seq1  ACTGGTTCTCAGGAGGTTAGGAGGAGGACCTCAAAGCCCATCTCCACAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTCTCAGGAGGTTAGGAGGAGGACCTCAAAGCCCATCTCCACAGT  650

seq1  GACATATTTCCTCCAACAAGGCCTTCTAATAGTGCCATTCCATAGTCCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATATTTCCTCCAACAAGGCCTTCTAATAGTGCCATTCCATAGTCCAA  700

seq1  ACATGCAAACCACCACTGGGTA--TTTTTGATTTGCTATTGTACATCA-T  747
      ||||||||||||||||||||||  |||||||||||||||||||||||| |
seq2  ACATGCAAACCACCACTGGGTATTTTTTTGATTTGCTATTGTACATCATT  750

seq1  TTATTGTACAAAAG-TAAACG-TTATAGATAAA--TGACACA-CAGTCAT  792
      |||||||||||||| |||||| |||||||||||  ||||||| |||||||
seq2  TTATTGTACAAAAGTTAAACGTTTATAGATAAAATTGACACACCAGTCAT  800

seq1  CAGGATAAGTCA-TTAGAGGAAAT-AAAAATTACATATG--ATCT-CGTC  837
      |||||||||||| ||||||||||| ||||||||||||||   ||| | ||
seq2  CAGGATAAGTCATTTAGAGGAAATAAAAAATTACATATGGATTCTCCTTC  850

seq1  TGGT-CTCAATACTAGAAAATACAGAAACA--TTTTTTTTTATT-AAAGT  883
      |||| |||||||||||||||||||||||||  |||||||||||| |||||
seq2  TGGTCCTCAATACTAGAAAATACAGAAACATTTTTTTTTTTATTAAAAGT  900

seq1  AG-CCACC-TTCCT--AAATACTT-GAAGA-CACAATAAAA-GGATTCAT  926
      || ||||| |||||  || ||||| ||||| |||||||||| |||| |||
seq2  AGCCCACCTTTCCTTAAATTACTTGGAAGACCACAATAAAAGGGATCCAT  950

seq1  TA-CCTATGT--CTTTTGTAAAG-ATATCATGTAAA-CCTATAAAAGAAA  971
      || |||||||   |||||||||| ||  |||||||| ||||||| ||| |
seq2  TACCCTATGTTCTTTTTGTAAAGAATTCCATGTAAACCCTATAAGAGATA  1000

seq1  AAAAATAAATTAA-----GAAGGTTCCA-CAACCTTTGAA--CCATAATG  1013
      || ||||| ||||     |||| | ||| || | ||||||  | ||||||
seq2  AATAATAATTTAATTTAGGAAGCTCCCATCACCTTTTGAAACCAATAATG  1050

seq1  ----CTTTCT--CATTTTTTTCT  1030
           |||||  |||||||||||
seq2  TGCCTTTTCTTACATTTTTTTCT  1073