BAC Information

Click to search

BAC

Clone NameB6Ng01-175A18
Chromosome17 (Build37)
Map Location 93,216,911 - 93,218,002
singlet/doubletsinglet
Overlap genenone
Upstream geneEG640442, LOC627395, LOC676141, LOC668877
Downstream geneLOC100043746, LOC100043747, LOC100043748, LOC100043907, Adcyap1, LOC676157, LOC627503
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-175A18.bB6Ng01-175A18.g
ACCGA002956GA002957
length4941,090
definitionB6Ng01-175A18.b B6Ng01-175A18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
tttgtttagctctgagccccattttttaatagggttatttgattttctag
agtccaccttcttgagttatatatatatatatatatatatatatatatat
atatatatatatattggatattagtgccctatctgatttaagataggtaa
agatcctttcccaatctgttgttgttctttttgtcttattgacagtgtct
tttgctgaaaggacccaggtagagctgtctcttgtgagactatgcggggc
ctagcaagcacagaagtggatgctcacagtcagctattggatatatcaca
gggctcccaatggagaagctagagaaagtaccaaaggagctaaagggatc
tgcaaccctataggtggaacaacattatgaactaaccagtaccctggagc
tcttgactctagctgcatatgtatcaaaagatggcctagtccgccatcac
tggaaagagaggcccattggacttgcaaactttatatgccccag
gaattctcacaaagtagttgtattgtaatattcagaagtatcccacacat
gctgatactctcatatcacgcaaataccatatattcatgcacatgcatat
acacacaaataataattacaattagtaaattacaatgctaattattaaat
cattatttactgatattaataattgatcaatttttaatttacttaaacaa
atacaacatgcatatttctaaagtctattttatatatatatgctttttat
aatttctataatttagctattatgctcaagaacttttttaaattaagttt
tccatataaaatagctttttatttttctaaattcaagatagaaatcaggt
tctctcaactattaaacaacagctcctatagagaagatacaacacacaag
gataacacacacacatacacacaaacacactcatatatatatatatatat
atatatatgcatattcttcaaggtttataaaaatagacatatgccagcac
ttgttttctcagtaaatcagttgtcctagagtcctagaaagtcagtccta
tcattatcccagttactatatttaccataatgaatcaatcaatagagaaa
ttctaaaatgttcaagcaactacacatatcagtgggttttgttttgctgt
tgtaattttctgggtggggggtggattcttgtattgttttaaaggtgaaa
atcttttcttcttgaattctccttgcttgcaaataatagaactctttaat
atatgaaggtaaggaaactttataaatgacacatcaatgtctataaccca
aagttgtttctccctttgaaattagtcctaaaattcaaatcattaagttc
atagcatgtatgaattctttgaacaatttttgttcaagatgtctgtttta
tattatacatttcatatccaacaacccattcagatcacccttctgggatt
accatgaaaaaagaaagacatgacaaactctttttatttgatgattaatc
cttcaggagaaacaagaacccaagcttatgttacatatttaattgggtta
aagacaagcaaaagatttctttggttctagattcatagcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_93216911_93218002
seq2: B6Ng01-175A18.g_61_1150

seq1  GAATTCTCACAAAGTAGTTGTATTGTAATATTCAGAAGTATCCCACACAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACAAAGTAGTTGTATTGTAATATTCAGAAGTATCCCACACAT  50

seq1  GCTGATACTCTCATATCACGCAAATACCATATATTCATGCACATGCATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATACTCTCATATCACGCAAATACCATATATTCATGCACATGCATAT  100

seq1  ACACACAAATAATAATTACAATTAGTAAATTACAATGCTAATTATTAAAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAAATAATAATTACAATTAGTAAATTACAATGCTAATTATTAAAT  150

seq1  CATTATTTACTGATATTAATAATTGATCAATTTTTAATTTACTTAAACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATTTACTGATATTAATAATTGATCAATTTTTAATTTACTTAAACAA  200

seq1  ATACAACATGCATATTTCTAAAGTCTATTTTATATATATATGCTTTTTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAACATGCATATTTCTAAAGTCTATTTTATATATATATGCTTTTTAT  250

seq1  AATTTCTATAATTTAGCTATTATGCTCAAGAACTTTTTTAAATTAAGTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTATAATTTAGCTATTATGCTCAAGAACTTTTTTAAATTAAGTTT  300

seq1  TCCATATAAAATAGCTTTTTATTTTTCTAAATTCAAGATAGAAATCAGGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATAAAATAGCTTTTTATTTTTCTAAATTCAAGATAGAAATCAGGT  350

seq1  TCTCTCAACTATTAAACAACAGCTCCTATAGAGAAGATACAACACACAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAACTATTAAACAACAGCTCCTATAGAGAAGATACAACACACAAG  400

seq1  GATAACACACACACATACACACAAACACACTCATATATATATATATATAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAACACACACACATACACACAAACACACTCATATATATATATATATAT  450

seq1  ATATATATGCATATTCTTCAAGGTTTATAAAAATAGACATATGCCAGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATATGCATATTCTTCAAGGTTTATAAAAATAGACATATGCCAGCAC  500

seq1  TTGTTTTCTCAGTAAATCAGTTGTCCTAGAGTCCTAGAAAGTCAGTCCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTCTCAGTAAATCAGTTGTCCTAGAGTCCTAGAAAGTCAGTCCTA  550

seq1  TCATTATCCCAGTTACTATATTTACCATAATGAATCAATCAATAGAGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATCCCAGTTACTATATTTACCATAATGAATCAATCAATAGAGAAA  600

seq1  TTCTAAAATGTTCAAGCAACTACACATATCAGTGGGTTTTGTTTTGCTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAATGTTCAAGCAACTACACATATCAGTGGGTTTTGTTTTGCTGT  650

seq1  TGTAATTTTCTGGGTGGGGGGTGGATTCTTGTATTGTTTTAAAGGTGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTTTCTGGGTGGGGGGTGGATTCTTGTATTGTTTTAAAGGTGAAA  700

seq1  ATCTTTTCTTCTTGAATTCTCCTTGCTTGCAAATAATAGAACTCTTTAAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTTCTTCTTGAATTCTCCTTGCTTGCAAATAATAGAACTCTTTAAT  750

seq1  ATATGAAGGTAAGGAAACTTTATAAATGACACATCAATGTCTATAACCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAGGTAAGGAAACTTTATAAATGACACATCAATGTCTATAACCCA  800

seq1  AAGTTGTTTCTCCCTTTGAAATTAGTCCTAAAATTCAAATCATTAAG-TC  849
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAGTTGTTTCTCCCTTTGAAATTAGTCCTAAAATTCAAATCATTAAGTTC  850

seq1  ATAGCATGTATGAATTCTTTGAACAATTTTTGTTCAAGATGTCTG-TTTA  898
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  ATAGCATGTATGAATTCTTTGAACAATTTTTGTTCAAGATGTCTGTTTTA  900

seq1  TATTATACATTTCATATCCAACAA-CCATTCAGATCAACCTTCT-GGATT  946
      |||||||||||||||||||||||| |||||||||||| |||||| |||||
seq2  TATTATACATTTCATATCCAACAACCCATTCAGATCACCCTTCTGGGATT  950

seq1  ACCATGAAAAAAGAAAGACAATGACAAAACTC-TTTTATTGAATGATTAA  995
      ||||||||||||||||||| ||||| |||||| |||||||  ||||||||
seq2  ACCATGAAAAAAGAAAGAC-ATGAC-AAACTCTTTTTATTTGATGATTAA  998

seq1  TCC-TCAGGAGAAAACCAAGAAACCAAAGCTTATTGTTACATA-TTAATT  1043
      ||| ||||||||||  |||| |||| ||||||| ||||||||| ||||||
seq2  TCCTTCAGGAGAAA--CAAG-AACCCAAGCTTA-TGTTACATATTTAATT  1044

seq1  GGGTTAAAGACAAAGGCCAAAAGGATTTCTTTGG-TCTAGATTCATAGCC  1092
      |||||||||||||  ||  ||| ||||||||||| |||||||||||||||
seq2  GGGTTAAAGACAA--GC--AAAAGATTTCTTTGGTTCTAGATTCATAGCC  1090