BAC Information

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BAC

Clone NameB6Ng01-178H06
Chromosome18 (Build37)17 (Build37)
Map Location 25,804,821 - 25,805,2505,851,151 - 5,851,191
singlet/doubletsingletsinglet
Overlap geneBrunol4
Upstream geneMocos, Fhod3, 5730494M16Rik, AW554918, LOC100041241
Downstream geneLOC665916, LOC100041263, LOC100041274
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-178H06.bB6Ng01-178H06.g
ACCGA005436GA005437
length424803
definitionB6Ng01-178H06.b B6Ng01-178H06.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(25,804,821 - 25,805,250)(5,851,151 - 5,851,191)
sequence
acacaatgtgggcttgagggcgtggcaaagtggttggggatgggaggggt
ctgttctgggcctccttgttcacctgtggatcttcagagggtggagggtg
agcctgggctgtggctttcttttatgactgcacagcaactcgcatgcttc
tctctgaaggaacacaatgagggagtgggaatccagggagagggaagggt
tccagaaaacctctaaagtcctgaggtgttgaacaaagctgtcagcagga
tatgccagtgttagggaaggagaggaaaggagggtacctgccaggttctg
ggtatcagaaatgaggggaaccagttccaacgggcaccttttggtaatta
gagagctccagtaatcttgggatagtaccaaactgtgaacccaataagta
aggttggaagtgtggtgtggggtg

gaattctaataaaaagtaaagcaaaaacttaaaaacaaaagatttaagag
aaaatcagtcaagaagtaaaaagaaaaaagaaataacaactatagttaga
gtcttcagagaaaaaaaaatagccatgcaacaagaacaggaggctattgt
aaaagagaaaacagaaatttaaaaaaaaaaaactctgagggtattaaata
tagaacaaatatattttaaaattgcacagacttccagaggataaatataa
ctaatatctaggaattatataatgggtaatatgatacaatatagaaaaga
atgttgaaaaaaatcaggcatcaaggagatccaagagccctttaaaggaa
attttaatgagagcttggtaaatgagccaattacaaagataaaatgccaa
atatatctcaaaactaaaaggttttttcacaatagccaggaaatggtatc
agcatatatgtctatcagcttttgaatggataatgaaaatgtggtacata
gaagaatgaaatattattcaacagtaaagaacaatgaaattattaaattg
atggggctagaaataaaagaagcacactgagtaaggaaactattttagtt
tgaatgataatggcccccataggctcatatattttcatatatgtgaatac
ttgccccctagttttggtggcagtgtttgggaaagattaggaggcatggg
tgtgttagggaaggtgtgtcaccagggatggactttgatattttaaaaga
ccatgccagggttttctctctctctctctctctctctctctctctctctc
tct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr18_25804821_25805250
seq2: B6Ng01-178H06.b_45_474

seq1  GAATTCACACAATGTGGGCTTGAGGGCGTGGCAAAGTGGTTGGGGATGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACAATGTGGGCTTGAGGGCGTGGCAAAGTGGTTGGGGATGGG  50

seq1  AGGGGTCTGTTCTGGGCCTCCTTGTTCACCTGTGGATCTTCAGAGGGTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGTCTGTTCTGGGCCTCCTTGTTCACCTGTGGATCTTCAGAGGGTGG  100

seq1  AGGGTGAGCCTGGGCTGTGGCTTTCTTTTATGACTGCACAGCAACTCGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGAGCCTGGGCTGTGGCTTTCTTTTATGACTGCACAGCAACTCGCA  150

seq1  TGCTTCTCTCTGAAGGAACACAATGAGGGAGTGGGAATCCAGGGAGAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCTCTCTGAAGGAACACAATGAGGGAGTGGGAATCCAGGGAGAGGG  200

seq1  AAGGGTTCCAGAAAACCTCTAAAGTCCTGAGGTGTTGAACAAAGCTGTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGTTCCAGAAAACCTCTAAAGTCCTGAGGTGTTGAACAAAGCTGTCA  250

seq1  GCAGGATATGCCAGTGTTAGGGAAGGAGAGGAAAGGAGGGTACCTGCCAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGATATGCCAGTGTTAGGGAAGGAGAGGAAAGGAGGGTACCTGCCAG  300

seq1  GTTCTGGGTATCAGAAATGAGGGGAACCAGTTCCAACGGGCACCTTTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGGTATCAGAAATGAGGGGAACCAGTTCCAACGGGCACCTTTTGG  350

seq1  TAATTAGAGAGCTCCAGTAATCTTGGGATAGTACCAAACTGTGAACCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTAGAGAGCTCCAGTAATCTTGGGATAGTACCAAACTGTGAACCCAA  400

seq1  TAAGTAAGGTTGGAAGTGTGGTGTGGGGTG  430
      ||||||||||||||||||||||||||||||
seq2  TAAGTAAGGTTGGAAGTGTGGTGTGGGGTG  430


seq1: chr17_5851151_5851191
seq2: B6Ng01-178H06.g_825_865 (reverse)

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAA  41
      |||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAA  41


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