BAC Information

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BAC

Clone NameB6Ng01-181K03
Chromosome17 (Build37)
Map Location 44,950,594 - 45,146,886
singlet/doubletdoublet
Overlap geneRunx2, Supt3h, 4930564C03Rik
Upstream geneDscr1l1, Enpp5, Enpp4, Clic5
Downstream geneEG210562, EG668314, Cdc5l, Spats1, EG668319, Aars2, Tcte1, Gm323, Nfkbie, Slc35b2, Hsp90ab1, Slc29a1, EG653016, Capn11, Tmem63b, Mrpl14, LOC100043363
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-181K03.bB6Ng01-181K03.g
ACCGA007743GA007744
length1,0151,129
definitionB6Ng01-181K03.b B6Ng01-181K03.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(45,145,875 - 45,146,886)(44,950,594 - 44,951,731)
sequence
gaattcattacacactgaaatatctgaacagatgctatcagatgaatgca
cgtgtgatgctcacaggttgtgcaactgtatgtgagccctggaagagcat
gtgagagaggagggtgaagaaggtgggagatgaagatagaaaggttgctt
gagcagggttttaatgtggtgcttagttagtagcatgctaaaaggctctc
ctgtagaaaagggagaatggcaaaatgcagtggctgacaggctactttta
aatcaatgccatgaaaagtgtcagacatatccattaacacaacagaacac
cctagtcactaacacgttcctagtggaacccaaagtgattaattttaagt
gaggatgtgatggtttggaaataagctaatgtgtactctcaggttgctct
gtttgatttaccaggaagtaacgtaaggactggattgaatgttggtcctc
agcacagaggcaaaggaaggggtggtctgtaccaactaagcaatgatctg
ctaattccactacacaaaccgaggaggcactgaggagagagaaaccttgc
cacaaagtagacttacttcatatttagaaatactaactcagagattaaac
cagtgaagataaataaaagccagactatataacaacaatctgcccaccta
ctgtggggaatgtaggtcaaggagaaagaataggggaaatataatccaca
aaatattcaaggcaaaaaatatgctggttattacagcaaccacaatctga
gaactataaaacactaaatgtaaattagtggtaaatcctgtgggcgttct
taaattcaatgatattttaaactcttctctgccaaggtgttttataaaca
aggttggtagactgatctctaagagaagcatttcattaaaaaaaaaaaac
aaattaaaattacttgagacagaaatattggttctaaaatttgtaattga
acagttaattggttatggtgcttagcaaacactgatgcagaagtcagctc
tagcagccagcaagg
gaattctttcagtggagcggcagctgagaatgctaactcgcctccaggtt
tactcctgtgtcatacatggtagaccacaatgtttcaataattctgtggt
ctgctattttgtaaaattgcttccttttggaaatttgtttcaatattggg
agctgccgagtcaataacttaacaatactttgattaattcagcatccagc
tttattctagggaagttcatgggactattaagctcttactgtttttaaca
tccttgtttctgttacactggaaaacaatttgattaacatgagctcattt
aattttgtcgatttcaagccattaccccgagagttagttacacatgccaa
gtgcaaatatttacagcaatttcatttttcaatttctagtgagagaaaat
agcatcatcatgatctttaacatgctgcgctgtgacctaggaaagctcac
agccgggctaagccttgtaccttcatgcttaacaggttcacagagaaaaa
gacttgaaataaggtagcacttaccccaaaagaagctttgctgacacggt
gtcactgcgctgaagaggctgtttgacgccatagtccctccttttttttc
cagatagaacttgtgccctctgttgtaaatactgcttgcagccttaaact
gaaaatacaaaccatacccagtccctgttttagttgtacagtatgcctgg
agtacatagactttatatttatttttttctgtcaagaaaattatgtagct
ggtaacatgtgaaaagcaaggaaacaaaacaaaacggagtgagcaaatat
ttgaaggacctactattcctgcatggactgtggttagagcactcactgac
tcggttggtctcggtggctggtagtgacctgcagagattaaccatttaaa
cgccagagccttcttgcagtcttcctggagaagtttgcaccgcacttgtg
gttctgtggttgtttgtgaggcgaatgagcattcacacaatcccaaaaag
caaagctttaaaactctatttttttgcaggcacttattactgagagacag
atcatgtgttgtgacctcacagtacttcaagtaagtggaactgccctacc
ctgtgcctccccatgctctcttcctccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_45145875_45146886
seq2: B6Ng01-181K03.b_45_1059 (reverse)

seq1  CCTTGCTGGCTGCT-GGGCTGACTTCTGCATCAGTGTTTGCTAAGCA-CA  48
      |||||||||||||| | |||||||||||||||||||||||||||||| ||
seq2  CCTTGCTGGCTGCTAGAGCTGACTTCTGCATCAGTGTTTGCTAAGCACCA  50

seq1  TAACCAATTAAACTGTTCAATTACAATTTTTAGAACCAATATTTTCTGTC  98
      ||||||||| |||||||||||||||| |||||||||||||| ||||||||
seq2  TAACCAATT-AACTGTTCAATTACAAATTTTAGAACCAATA-TTTCTGTC  98

seq1  TCAAGTAATTTTAATTTGGTTTTTTTTTTTAATGAAATGCTTCTCTTAGA  148
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TCAAGTAATTTTAATTTGTTTTTTTTTTTTAATGAAATGCTTCTCTTAGA  148

seq1  GATCAGTCTACCAA-CTTGTTTATAAAACACCTTGGCAGAGAAGAGTTTT  197
      |||||||||||||| ||||||||||||||||||||||||||||||| |||
seq2  GATCAGTCTACCAACCTTGTTTATAAAACACCTTGGCAGAGAAGAG-TTT  197

seq1  AAAATATCATTGAATTTAAGAACG-CCACAGGATTTACCACTAATTTACA  246
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AAAATATCATTGAATTTAAGAACGCCCACAGGATTTACCACTAATTTACA  247

seq1  TTTAGTG-TTTATAGTTCTCAGATTGTGGTTGCTGTAATAACCAGCATA-  294
      ||||||| ||||||||||||||||||||||||||||||||||||||||| 
seq2  TTTAGTGTTTTATAGTTCTCAGATTGTGGTTGCTGTAATAACCAGCATAT  297

seq1  TTTTTGCCTTGAATATTTTGTGGATTATATTTCCCCTATTCTTTCTCCTT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGCCTTGAATATTTTGTGGATTATATTTCCCCTATTCTTTCTCCTT  347

seq1  GACCTACATTCCCCACAGTAGGTGGGCAGATTGTTGTTATATAGTCTGGC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTACATTCCCCACAGTAGGTGGGCAGATTGTTGTTATATAGTCTGGC  397

seq1  TTTTATTTATCTTCACTGGTTTAATCTCTGAGTTAGTATTTCTAAATATG  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTTATCTTCACTGGTTTAATCTCTGAGTTAGTATTTCTAAATATG  447

seq1  AAGTAAGTCTACTTTGTGGCAAGGTTTCTCTCTCCTCAGTGCCTCCTCGG  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGTCTACTTTGTGGCAAGGTTTCTCTCTCCTCAGTGCCTCCTCGG  497

seq1  TTTGTGTAGTGGAATTAGCAGATCATTGCTTAGTTGGTACAGACCACCCC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGTAGTGGAATTAGCAGATCATTGCTTAGTTGGTACAGACCACCCC  547

seq1  TTCCTTTGCCTCTGTGCTGAGGACCAACATTCAATCCAGTCCTTACGTTA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTTGCCTCTGTGCTGAGGACCAACATTCAATCCAGTCCTTACGTTA  597

seq1  CTTCCTGGTAAATCAAACAGAGCAACCTGAGAGTACACATTAGCTTATTT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGGTAAATCAAACAGAGCAACCTGAGAGTACACATTAGCTTATTT  647

seq1  CCAAACCATCACATCCTCACTTAAAATTAATCACTTTGGGTTCCACTAGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAACCATCACATCCTCACTTAAAATTAATCACTTTGGGTTCCACTAGG  697

seq1  AACGTGTTAGTGACTAGGGTGTTCTGTTGTGTTAATGGATATGTCTGACA  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTGTTAGTGACTAGGGTGTTCTGTTGTGTTAATGGATATGTCTGACA  747

seq1  CTTTTCATGGCATTGATTTAAAAGTAGCCTGTCAGCCACTGCATTTTGCC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCATGGCATTGATTTAAAAGTAGCCTGTCAGCCACTGCATTTTGCC  797

seq1  ATTCTCCCTTTTCTACAGGAGAGCCTTTTAGCATGCTACTAACTAAGCAC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCCCTTTTCTACAGGAGAGCCTTTTAGCATGCTACTAACTAAGCAC  847

seq1  CACATTAAAACCCTGCTCAAGCAACCTTTCTATCTTCATCTCCCACCTTC  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTAAAACCCTGCTCAAGCAACCTTTCTATCTTCATCTCCCACCTTC  897

seq1  TTCACCCTCCTCTCTCACATGCTCTTCCAGGGCTCACATACAGTTGCACA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCCTCCTCTCTCACATGCTCTTCCAGGGCTCACATACAGTTGCACA  947

seq1  ACCTGTGAGCATCACACGTGCATTCATCTGATAGCATCTGTTCAGATATT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGTGAGCATCACACGTGCATTCATCTGATAGCATCTGTTCAGATATT  997

seq1  TCAGTGTGTAATGAATTC  1012
      ||||||||||||||||||
seq2  TCAGTGTGTAATGAATTC  1015

seq1: chr17_44950594_44951731
seq2: B6Ng01-181K03.g_65_1193

seq1  GAATTCTTTCAGTGGAGCGGCAGCTGAGAATGCTAACTCGCCTCCAGGTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCAGTGGAGCGGCAGCTGAGAATGCTAACTCGCCTCCAGGTT  50

seq1  TACTCCTGTGTCATACATGGTAGACCACAATGTTTCAATAATTCTGTGGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCTGTGTCATACATGGTAGACCACAATGTTTCAATAATTCTGTGGT  100

seq1  CTGCTATTTTGTAAAATTGCTTCCTTTTGGAAATTTGTTTCAATATTGGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTATTTTGTAAAATTGCTTCCTTTTGGAAATTTGTTTCAATATTGGG  150

seq1  AGCTGCCGAGTCAATAACTTAACAATACTTTGATTAATTCAGCATCCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGCCGAGTCAATAACTTAACAATACTTTGATTAATTCAGCATCCAGC  200

seq1  TTTATTCTAGGGAAGTTCATGGGACTATTAAGCTCTTACTGTTTTTAACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCTAGGGAAGTTCATGGGACTATTAAGCTCTTACTGTTTTTAACA  250

seq1  TCCTTGTTTCTGTTACACTGGAAAACAATTTGATTAACATGAGCTCATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGTTTCTGTTACACTGGAAAACAATTTGATTAACATGAGCTCATTT  300

seq1  AATTTTGTCGATTTCAAGCCATTACCCCGAGAGTTAGTTACACATGCCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTGTCGATTTCAAGCCATTACCCCGAGAGTTAGTTACACATGCCAA  350

seq1  GTGCAAATATTTACAGCAATTTCATTTTTCAATTTCTAGTGAGAGAAAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAAATATTTACAGCAATTTCATTTTTCAATTTCTAGTGAGAGAAAAT  400

seq1  AGCATCATCATGATCTTTAACATGCTGCGCTGTGACCTAGGAAAGCTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATCATCATGATCTTTAACATGCTGCGCTGTGACCTAGGAAAGCTCAC  450

seq1  AGCCGGGCTAAGCCTTGTACCTTCATGCTTAACAGGTTCACAGAGAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGGGCTAAGCCTTGTACCTTCATGCTTAACAGGTTCACAGAGAAAAA  500

seq1  GACTTGAAATAAGGTAGCACTTACCCCAAAAGAAGCTTTGCTGACACGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGAAATAAGGTAGCACTTACCCCAAAAGAAGCTTTGCTGACACGGT  550

seq1  GTCACTGCGCTGAAGAGGCTGTTTGACGCCATAGTCCCTCCTTTTTTTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTGCGCTGAAGAGGCTGTTTGACGCCATAGTCCCTCCTTTTTTTTC  600

seq1  CAGATAGAACTTGTGCCCTCTGTTGTAAATACTGCTTGCAGCCTTAAACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGAACTTGTGCCCTCTGTTGTAAATACTGCTTGCAGCCTTAAACT  650

seq1  GAAAATACAAACCATACCCAGTCCCTGTTTTAGTTGTACAGTATGCCTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATACAAACCATACCCAGTCCCTGTTTTAGTTGTACAGTATGCCTGG  700

seq1  AGTACATAGACTTTATATTTATTTTTTTCTGTCAAG-AAATTATGTAGCT  749
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGTACATAGACTTTATATTTATTTTTTTCTGTCAAGAAAATTATGTAGCT  750

seq1  GGTAACATGTGAAAAGCAAGGAAACAAAACAAAACGGAGTGAGCAAATAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACATGTGAAAAGCAAGGAAACAAAACAAAACGGAGTGAGCAAATAT  800

seq1  TTGAAGGACCTACTATTCCTGCATGGACTGTGGTTAGAGCACTCACTGAC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGACCTACTATTCCTGCATGGACTGTGGTTAGAGCACTCACTGAC  850

seq1  TCGGTTGGTCTCGGTGGCTGGTAGTGACCTGCAGAGATTAACCATTTAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGGTTGGTCTCGGTGGCTGGTAGTGACCTGCAGAGATTAACCATTTAAA  900

seq1  CGCCAGAGCCTTCTTGCAGTCTTCCTGGAGAAAGTTTGCACCGCACTTGT  949
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CGCCAGAGCCTTCTTGCAGTCTTCCTGGAG-AAGTTTGCACCGCACTTGT  949

seq1  GGTTCTGTGGTTGTTTGTGAGGCGAATGAAGCATTCACACAATCCAAAAA  999
      |||||||||||||||||||||||||||| |||||||||||||||| ||||
seq2  GGTTCTGTGGTTGTTTGTGAGGCGAATG-AGCATTCACACAATCCCAAAA  998

seq1  AGCAAAAGCTTTAAAACTCCTATTTTTTGCAAGCAC-TATTACTGGAGAG  1048
      ||| |||||||||||||||   ||||||||| |||| ||||||| |||||
seq2  AGC-AAAGCTTTAAAACTCTATTTTTTTGCAGGCACTTATTACT-GAGAG  1046

seq1  ACAGAATCATGTGGTTTGTGACCTCACAGTACTCAAAGTAAAGTGGGACT  1098
      |||| ||||||||  ||||||||||||||||||  |||| |||||| |||
seq2  ACAG-ATCATGTG--TTGTGACCTCACAGTACTTCAAGT-AAGTGGAACT  1092

seq1  G-CCTACCACTGTGGCTTCCCCCTTGCTCTCTTCCCTCCCT  1138
      | |||||| ||||| ||  |||| ||||||||| |||||||
seq2  GCCCTACC-CTGTGCCT--CCCCATGCTCTCTT-CCTCCCT  1129