BAC Information

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BAC

Clone NameB6Ng01-182D17
Chromosome17 (Build37)
Map Location 22,896,682 - 22,897,737
singlet/doubletsinglet
Overlap genenone
Upstream gene4930515G13Rik, 2610036F08Rik, LOC624960, 3110048L19Rik, 4930432O21Rik, LOC665820, LOC665825, LOC674332, LOC631010, EG665844, EG210853, LOC671007, EG240038, EG631624, 6330416L07Rik, Zfp758, 1300003B13Rik, EG210876, LOC100042656, EG628185, ENSMUSG00000046088, EG383218, EG433078
Downstream geneLOC100042679, A630033E08Rik, LOC671128, LOC665961, EG434701, LOC665976, LOC100042225, LOC100042234, EG665988, LOC100042248, Zfp40, LOC100042257, LOC100042261, Vmn2r-ps133, EG666002, EG638102, EG619697, EG619775, EG619788, Olfr752-ps1, EG666030, EG381070, Zfp213, Zfp13, Zscan10, LOC666062, Mmp25, LOC665757, BC038613, Thoc6, Hcfc1r1, Tnfrsf12a, Cldn6, Cldn9, EG666080, 1520401A03Rik, Pkmyt1, Paqr4, Kremen2, 9530082P21Rik, Flywch1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-182D17.bB6Ng01-182D17.g
ACCGA008182GA008183
length1,1671,051
definitionB6Ng01-182D17.b B6Ng01-182D17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcattcaggagagaaaccttacaaatgtagtgagtgtggcaaatgc
ttcactagtggctcatatcttagaatgcaccaaagaattcatacaggaga
caaaccttacaaatgtagtgactgtgataaatgctttactcagaaatgca
gtcttagaattcaccagagaagtcatacaggagagaaaccttacaaatgt
ggtaattgcgacagatcttttacaagtggctcatatcttagaattcatca
gagaattcatagaggtgagaaacctcataaatgtagtgaatgtgacaaat
cctttacccagaaaggctatcttagaattcatcagagaattcataaagga
gaaaaatctcacaaaggtagttagtgtgaaaaatcctttacccagaaacc
ctaacttgtggaacttttcaaagaattcatataggaaaaaaaacttaaat
atagggaatatagcaaatcccttcacaggaaaactgtcttagaacttatc
agaaatttcatacagtaaataaaacatacaaatgtatagaatctgataaa
tcttttacccagaaaggctgtcttagaattcatgagacttcattcaagaa
agaagctttataaatgtgacaaatcttttaccaggacaaactatcttaga
acttgacagagataacaggagagaaactttacaaatttggtgaatataca
aatccttaactattggcacacctcttagaatatccctcatgacacataag
tttccacactagagaataattatgatcaaaagaaacttgtgaaaaccttg
agtaatgttcaaatcttagaaaataccaagagtttatgctgagggaaaat
ctgaaaatgtgacaatgtaggaaattttttcttcaacctttttacttgtt
aaacttaatacttgtttgacttttagtcagtctttcagctttgctcaact
ttattaacttgtcatcctcaataattcatatgaggacaaatggagagcca
gagatgtgatatgtgtacagtttctgcagactgaatgaccaatctgagat
tgtgatagacagctatactacttcaaatagctcagaatcctggagtgacg
caatgctggctagtcaatgatgaactggaagaataccctcttaaagagga
ttttaccagggtgttca
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
gaattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctgcttgat
tttaggaccctgggcaatggtggactcttattgtctgggagcattagcca
aagtaacctctttcagaagttgccttggtcattgttgctttatgaaagca
gtagacaaaaccaattacaataaacctgatgcatgtcatgttctgaaata
taatcaagaagaggtagtatgaggtcatgaggactaagggcccaattagt
gggtcttttgtttttgttcctttgttttgttttgtatctaaacaaaatcg
caatcatttgatttaaccaatgaagactccgtcatcagaagctggggtga
aagactgccatctaggagagtcctagaaagcacacagctgactttcctca
tcactaacaatcacaaaacgaaaaaggaagtctcctccctgccatctcaa
aaacccctcaaactgaatatcccttccttctacttcttgttagttggttt
atccatcctcctaacttcatcttactctttcttttctttttttttttttt
ttctgtttcactccctgacaactgattgctttaagagaacttggacagca
catgcagattacataccattggctacaatttcctgacacacagaaaataa
aaatgacacacaatggcatggctatgtgaaagcagatttccattatttct
gggactctctagaacacagagtttatatacacaaacacataatacaggag
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr17_22896682_22897737
seq2: B6Ng01-182D17.g_64_1114

seq1  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCACCTGAGGAATACCGAATGGCAGAGAAGCACCTGAAAAAATG  50

seq1  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGAT  100

seq1  TCCACCTCACACCAGTGAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACCTCACACCAGTGAGAATGGCTAAGATCAAAAATTCAGGTGACAGC  150

seq1  AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGGCGAGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTGGTG  200

seq1  GAATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTGCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCA  250

seq1  GAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAATTGGACATAGTACTACCGGAGGATCCAGCAATACCTCTCCTGGGC  300

seq1  ATATATCCAGAAGAAGCCCCAACTGGTAAGAAGGACACATGCTGCTTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATCCAGAAGAAGCCCCAACTGGTAAGAAGGACACATGCTGCTTGAT  350

seq1  TTTAGGACCCTGGGCAATGGTGGACTCTTATTGTCTGGGAGCATTAGCCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGACCCTGGGCAATGGTGGACTCTTATTGTCTGGGAGCATTAGCCA  400

seq1  AAGTAACCTCTTTCAGAAGTTGCCTTGGTCATTGTTGCTTTATGAAAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACCTCTTTCAGAAGTTGCCTTGGTCATTGTTGCTTTATGAAAGCA  450

seq1  GTAGACAAAACCAATTACAATAAACCTGATGCATGTCATGTTCTGAAATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACAAAACCAATTACAATAAACCTGATGCATGTCATGTTCTGAAATA  500

seq1  TAATCAAGAAGAGGTAGTATGAGGTCATGAGGACTAAGGGCCCAATTAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCAAGAAGAGGTAGTATGAGGTCATGAGGACTAAGGGCCCAATTAGT  550

seq1  GGGTCTTTTGTTTTTGTTCCTTTGTTTTGTTTTGTATCTAAACAAAATCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCTTTTGTTTTTGTTCCTTTGTTTTGTTTTGTATCTAAACAAAATCG  600

seq1  CAATCATTTGATTTAACCAATGAAGACTCCGTCATCAGAAGCTGGGGTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATTTGATTTAACCAATGAAGACTCCGTCATCAGAAGCTGGGGTGA  650

seq1  AAGACTGCCATCTAGGAGAGTCCTAGAAAGCACACAGCTGACTTTCCTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTGCCATCTAGGAGAGTCCTAGAAAGCACACAGCTGACTTTCCTCA  700

seq1  TCACTAACAATCACAAAACGAAAAAGGAAGTCTCCTCCCTGCCATCTCAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAACAATCACAAAACGAAAAAGGAAGTCTCCTCCCTGCCATCTCAA  750

seq1  AAACCCCTCAAACTGAATATCCCTTCCTTCTACTTCTTGTTAGTTGGTTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCTCAAACTGAATATCCCTTCCTTCTACTTCTTGTTAGTTGGTTT  800

seq1  ATCCATCCTCCTAACTTCATCTTACTCTTTCTTTTCTTTTTTTTTTTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCCTCCTAACTTCATCTTACTCTTTCTTTTCTTTTTTTTTTTTTT  850

seq1  CTGT-TTTCACTCCCTGACAACTGATTGC-TTAAGAGAAC-TGGACAGCA  897
       | | |||||||||||||||||||||||| |||||||||| |||||||||
seq2  TTCTGTTTCACTCCCTGACAACTGATTGCTTTAAGAGAACTTGGACAGCA  900

seq1  CATGCAGATTACATACCATTGGCTACAA-TTCCTGACACACAGAAAAATA  946
      |||||||||||||||||||||||||||| |||||||||||||| ||||||
seq2  CATGCAGATTACATACCATTGGCTACAATTTCCTGACACACAG-AAAATA  949

seq1  AAAATGACACACAATGGCATGGCTATGTTGAAAAGCAGAATTTCCATTAT  996
      ||||||||||||||||||||||||||||   ||||||| |||||||||||
seq2  AAAATGACACACAATGGCATGGCTATGT--GAAAGCAG-ATTTCCATTAT  996

seq1  TTCTGGGACTCTCTAGACACCAGAGTTTAATATACACAAAACACATAAAT  1046
      |||||||||||||||||   |||||||| |||||||| |||||||| |||
seq2  TTCTGGGACTCTCTAGAACACAGAGTTT-ATATACAC-AAACACAT-AAT  1043

seq1  ACAAAGGAGT  1056
      ||  ||||||
seq2  AC--AGGAGT  1051